Gene annotation
Transcriptome id Sobic.002G222000.1
Synonym
Functional annotation -
UniProt A0A1B6QCU7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
2 Sobic.002G148166 - -
3 Sobic.010G254000 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
4 Sobic.003G173266 - K02956: RP-S15, MRPS15, small subunit ribosomal protein S15
5 Sobic.001G266000 OsClp10 - Putative Clp protease homologue, expressed -
6 Sobic.005G002050 - -
7 Sobic.003G169300 chloroplast 30S ribosomal protein S2, putative, expressed K02967: RP-S2, MRPS2, small subunit ribosomal protein S2
8 Sobic.005G110493 - -
9 Sobic.003G130200 embryonic protein DC-8, putative, expressed -
10 Sobic.004G251400 - -
11 Sobic.004G087000 ATP synthase subunit beta, putative, expressed K02112: ATPF1B, F-type H+/Na+-transporting ATPase subunit beta
12 Sobic.003G166400 - K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
13 Sobic.002G150200 cytochrome c biogenesis protein ccsA, putative, expressed -
14 Sobic.002G149966 - -
15 Sobic.002G150032 - -
16 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
17 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
18 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18
19 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
20 Sobic.007G109200 ATP synthase epsilon chain, putative, expressed K02114: ATPF1E, F-type H+-transporting ATPase subunit epsilon


Gene co-expression network
sample Sobic002G222000 Sobic002G222000 Sobic003G172900 Sobic003G172900 Sobic002G222000--Sobic003G172900 Sobic002G148166 Sobic002G148166 Sobic002G222000--Sobic002G148166 Sobic010G254000 Sobic010G254000 Sobic002G222000--Sobic010G254000 Sobic003G173266 Sobic003G173266 Sobic002G222000--Sobic003G173266 Sobic001G266000 Sobic001G266000 Sobic002G222000--Sobic001G266000 Sobic005G002050 Sobic005G002050 Sobic002G222000--Sobic005G002050 Sobic003G169300 Sobic003G169300 Sobic002G222000--Sobic003G169300 Sobic005G110493 Sobic005G110493 Sobic002G222000--Sobic005G110493 Sobic003G130200 Sobic003G130200 Sobic002G222000--Sobic003G130200 Sobic004G251400 Sobic004G251400 Sobic003G172900--Sobic004G251400 Sobic002G150032 Sobic002G150032 Sobic003G172900--Sobic002G150032 Sobic003G172900--Sobic001G266000 Sobic003G172900--Sobic003G173266 Sobic004G087000 Sobic004G087000 Sobic003G172900--Sobic004G087000 Sobic003G172850 Sobic003G172850 Sobic003G172900--Sobic003G172850 Sobic002G044500 Sobic002G044500 Sobic003G172900--Sobic002G044500 Sobic003G172900--Sobic002G222000 Sobic002G149966 Sobic002G149966 Sobic003G172900--Sobic002G149966 Sobic002G150200 Sobic002G150200 Sobic002G148166--Sobic002G150200 Sobic002G148166--Sobic003G130200 Sobic003G172701 Sobic003G172701 Sobic002G148166--Sobic003G172701 Sobic002G148166--Sobic005G110493 Sobic004G210400 Sobic004G210400 Sobic002G148166--Sobic004G210400 Sobic002G148166--Sobic005G002050 Sobic002G148166--Sobic003G169300 Sobic002G148166--Sobic004G087000 Sobic002G148166--Sobic002G222000 Sobic010G254000--Sobic002G222000 Sobic010G254000--Sobic002G148166 Sobic010G254000--Sobic005G002050 Sobic010G254000--Sobic003G172900 Sobic010G254000--Sobic003G169300 Sobic010G254000--Sobic005G110493 Sobic010G254000--Sobic003G173266 Sobic010G254000--Sobic003G130200 Sobic010G254000--Sobic004G251400 Sobic003G173266--Sobic003G169300 Sobic003G173266--Sobic003G172900 Sobic003G173266--Sobic003G172850 Sobic003G173266--Sobic001G266000 Sobic003G173266--Sobic004G251400 Sobic003G173266--Sobic002G222000 Sobic003G173266--Sobic005G110493 Sobic003G173266--Sobic002G148166 Sobic010G052866 Sobic010G052866 Sobic003G173266--Sobic010G052866 Sobic001G266000--Sobic002G150032 Sobic001G266000--Sobic003G172900 Sobic001G266000--Sobic002G149966 Sobic001G266000--Sobic003G172850 Sobic001G266000--Sobic003G173266 Sobic002G014900 Sobic002G014900 Sobic001G266000--Sobic002G014900 Sobic001G266000--Sobic002G044500 Sobic001G266000--Sobic002G222000 Sobic006G123800 Sobic006G123800 Sobic001G266000--Sobic006G123800 Sobic005G002050--Sobic003G130200 Sobic005G002050--Sobic002G150200 Sobic005G002050--Sobic002G148166 Sobic005G002050--Sobic010G254000 Sobic005G002050--Sobic004G210400 Sobic005G002050--Sobic002G222000 Sobic003G168425 Sobic003G168425 Sobic005G002050--Sobic003G168425 Sobic005G002050--Sobic005G110493 Sobic003G166400 Sobic003G166400 Sobic005G002050--Sobic003G166400 Sobic003G169300--Sobic005G110493 Sobic003G169300--Sobic003G168425 Sobic003G169300--Sobic003G173266 Sobic003G169300--Sobic010G052866 Sobic004G087050 Sobic004G087050 Sobic003G169300--Sobic004G087050 Sobic003G169300--Sobic003G172701 Sobic003G172500 Sobic003G172500 Sobic003G169300--Sobic003G172500 Sobic003G169300--Sobic002G148166 Sobic003G169300--Sobic004G251400 Sobic005G110493--Sobic003G169300 Sobic005G110493--Sobic003G168425 Sobic005G110493--Sobic004G087050 Sobic005G110493--Sobic003G172701 Sobic010G139200 Sobic010G139200 Sobic005G110493--Sobic010G139200 Sobic005G110493--Sobic003G172500 Sobic005G110493--Sobic003G130200 Sobic005G110493--Sobic002G148166 Sobic005G110493--Sobic010G052866 Sobic003G130200--Sobic002G150200 Sobic003G130200--Sobic004G210400 Sobic003G130200--Sobic002G148166 Sobic003G130200--Sobic005G002050 Sobic003G130200--Sobic005G110493 Sobic003G130200--Sobic003G168425 Sobic003G130200--Sobic003G169300 Sobic003G130200--Sobic010G139200 Sobic003G130200--Sobic004G087050
Octagon: transcription factors


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