Gene annotation
Transcriptome id Sobic.007G080780.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8L6
Pfam PF08263 PF00560
Panther DB PTHR27004 PTHR27004:SF44
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os11g35840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT66910 , PNT66909
Barley HORVU3Hr1G004090.6 , HORVU3Hr1G004090.4 , HORVU3Hr1G004090.2 , HORVU3Hr1G004090.3
Wheat TraesCSU02G092500 , TraesCS4A02G421800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G252401 - -
2 Sobic.001G071200 - -
3 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
4 Sobic.003G255900 expressed protein -
5 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.006G014900 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
7 Sobic.010G006300 homeobox domain containing protein, expressed -
8 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
9 Sobic.006G093000 methyltransferase domain containing protein, expressed -
10 Sobic.001G176700 CBS domain containing protein, expressed -
11 Sobic.009G045600 pro-resilin precursor, putative, expressed -
12 Sobic.002G211000 DUF581 domain containing protein, expressed -
13 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
14 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
15 Sobic.009G182800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
16 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
17 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
18 Sobic.003G223400 down-regulated TF in developmental senescence(PubMedID : 27586543)@expressed protein K09422: transcription factor MYB, plant
19 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
20 Sobic.007G141700 hcr2-5D, putative, expressed -


Gene co-expression network
sample Sobic007G080780 Sobic007G080780 Sobic001G252401 Sobic001G252401 Sobic007G080780--Sobic001G252401 Sobic001G071200 Sobic001G071200 Sobic007G080780--Sobic001G071200 Sobic003G284800 Sobic003G284800 Sobic007G080780--Sobic003G284800 Sobic003G255900 Sobic003G255900 Sobic007G080780--Sobic003G255900 Sobic004G099700 Sobic004G099700 Sobic007G080780--Sobic004G099700 Sobic006G014900 Sobic006G014900 Sobic007G080780--Sobic006G014900 Sobic010G006300 Sobic010G006300 Sobic007G080780--Sobic010G006300 Sobic006G123500 Sobic006G123500 Sobic007G080780--Sobic006G123500 Sobic006G093000 Sobic006G093000 Sobic007G080780--Sobic006G093000 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic003G403800 Sobic003G403800 Sobic001G252401--Sobic003G403800 Sobic003G285600 Sobic003G285600 Sobic001G252401--Sobic003G285600 Sobic001G252401--Sobic007G080780 Sobic010G162500 Sobic010G162500 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic004G268500 Sobic004G268500 Sobic001G071200--Sobic004G268500 Sobic005G138600 Sobic005G138600 Sobic001G071200--Sobic005G138600 Sobic002G331800 Sobic002G331800 Sobic001G071200--Sobic002G331800 Sobic010G076800 Sobic010G076800 Sobic001G071200--Sobic010G076800 Sobic001G071200--Sobic003G284800 Sobic002G354600 Sobic002G354600 Sobic001G071200--Sobic002G354600 Sobic006G214700 Sobic006G214700 Sobic001G071200--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic001G071200--Sobic002G025700 Sobic003G253300 Sobic003G253300 Sobic001G071200--Sobic003G253300 Sobic002G112400 Sobic002G112400 Sobic003G284800--Sobic002G112400 Sobic009G062400 Sobic009G062400 Sobic003G284800--Sobic009G062400 Sobic003G284800--Sobic003G253300 Sobic006G265900 Sobic006G265900 Sobic003G284800--Sobic006G265900 Sobic002G061900 Sobic002G061900 Sobic003G284800--Sobic002G061900 Sobic006G097500 Sobic006G097500 Sobic003G284800--Sobic006G097500 Sobic007G053800 Sobic007G053800 Sobic003G284800--Sobic007G053800 Sobic001G128600 Sobic001G128600 Sobic003G284800--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic003G284800--Sobic008G006100 Sobic003G026600 Sobic003G026600 Sobic003G255900--Sobic003G026600 Sobic006G055000 Sobic006G055000 Sobic003G255900--Sobic006G055000 Sobic008G065200 Sobic008G065200 Sobic003G255900--Sobic008G065200 Sobic003G255900--Sobic004G099700 Sobic007G141700 Sobic007G141700 Sobic003G255900--Sobic007G141700 Sobic003G255900--Sobic004G268500 Sobic005G203300 Sobic005G203300 Sobic003G255900--Sobic005G203300 Sobic003G255900--Sobic006G123500 Sobic002G136100 Sobic002G136100 Sobic003G255900--Sobic002G136100 Sobic004G099700--Sobic006G123500 Sobic001G404500 Sobic001G404500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic004G099700--Sobic008G060300 Sobic004G063200 Sobic004G063200 Sobic004G099700--Sobic004G063200 Sobic003G410900 Sobic003G410900 Sobic004G099700--Sobic003G410900 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000 Sobic010G004500 Sobic010G004500 Sobic006G014900--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic006G014900--Sobic002G064200 Sobic008G054100 Sobic008G054100 Sobic006G014900--Sobic008G054100 Sobic006G014900--Sobic007G080780 Sobic006G007450 Sobic006G007450 Sobic006G014900--Sobic006G007450 Sobic010G161201 Sobic010G161201 Sobic006G014900--Sobic010G161201 Sobic007G189300 Sobic007G189300 Sobic006G014900--Sobic007G189300 Sobic008G095100 Sobic008G095100 Sobic006G014900--Sobic008G095100 Sobic003G366100 Sobic003G366100 Sobic006G014900--Sobic003G366100 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic001G176700 Sobic001G176700 Sobic010G006300--Sobic001G176700 Sobic007G028200 Sobic007G028200 Sobic010G006300--Sobic007G028200 Sobic010G006300--Sobic003G403800 Sobic010G006300--Sobic006G122500 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic007G189600 Sobic007G189600 Sobic006G093000--Sobic007G189600 Sobic003G163700 Sobic003G163700 Sobic006G093000--Sobic003G163700 Sobic002G132900 Sobic002G132900 Sobic006G093000--Sobic002G132900 Sobic005G111200 Sobic005G111200 Sobic006G093000--Sobic005G111200 Sobic001G463200 Sobic001G463200 Sobic006G093000--Sobic001G463200 Sobic007G090475 Sobic007G090475 Sobic006G093000--Sobic007G090475 Sobic006G093000--Sobic007G080780 Sobic001G158900 Sobic001G158900 Sobic006G093000--Sobic001G158900 Sobic006G093000--Sobic010G161201
Octagon: transcription factors


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