Gene annotation
Transcriptome id Sobic.010G006300.1
Synonym Sb10g000800, BEL1
Functional annotation homeobox domain containing protein, expressed
UniProt C5Z279
Pfam PF05920 PF07526
Panther DB PTHR11850 PTHR11850:SF131
NCBI CDD KOG0773; Transcription factor MEIS1 and related HOX domain proteins
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G41410 : POX (plant homeobox) family protein
RAP-DB (Rice) LOC_Os06g01934.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008024 , Zm00025a041173
Brachypodium KQK13360 , PNT74190 , KQK20028 , PNT76714 , PNT76713 , KQK13359 , KQK23477
Barley HORVU4Hr1G074250.1 , HORVU4Hr1G074250.2
Wheat TraesCS4A02G022700 , TraesCS4D02G279300 , TraesCS7D02G019800 , TraesCS4B02G280700 , TraesCS7A02G022600
Populus -


JBrowse

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cDNA sequences
Sobic.010G006300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
2 Sobic.001G252401 - -
3 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.001G176700 CBS domain containing protein, expressed -
5 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
6 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.006G122500 methyltransferase domain containing protein, expressed -
8 Sobic.007G080780 - -
9 Sobic.001G276400 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
10 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
11 Sobic.008G193200 expressed protein -
12 Sobic.004G289300 expressed protein -
13 Sobic.007G141300 - -
14 Sobic.010G125800 - -
15 Sobic.006G014900 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.010G263500 expressed protein -
17 Sobic.007G189300 DC1 domain containing protein, expressed -
18 Sobic.009G137300 - -
19 Sobic.006G093000 methyltransferase domain containing protein, expressed -
20 Sobic.001G095900 - -


Gene co-expression network
sample Sobic010G006300 Sobic010G006300 Sobic010G162500 Sobic010G162500 Sobic010G006300--Sobic010G162500 Sobic001G252401 Sobic001G252401 Sobic010G006300--Sobic001G252401 Sobic003G285600 Sobic003G285600 Sobic010G006300--Sobic003G285600 Sobic001G176700 Sobic001G176700 Sobic010G006300--Sobic001G176700 Sobic007G028200 Sobic007G028200 Sobic010G006300--Sobic007G028200 Sobic003G403800 Sobic003G403800 Sobic010G006300--Sobic003G403800 Sobic006G122500 Sobic006G122500 Sobic010G006300--Sobic006G122500 Sobic007G080780 Sobic007G080780 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic003G097701 Sobic003G097701 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic001G252401--Sobic003G403800 Sobic001G252401--Sobic003G285600 Sobic001G252401--Sobic007G080780 Sobic001G252401--Sobic010G162500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic001G176700--Sobic007G028200 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic006G063900 Sobic006G063900 Sobic003G403800--Sobic006G063900 Sobic003G403800--Sobic001G252401 Sobic010G201600 Sobic010G201600 Sobic003G403800--Sobic010G201600 Sobic001G167900 Sobic001G167900 Sobic003G403800--Sobic001G167900 Sobic003G403800--Sobic003G050000 Sobic002G061900 Sobic002G061900 Sobic003G403800--Sobic002G061900 Sobic004G359600 Sobic004G359600 Sobic003G403800--Sobic004G359600 Sobic004G124400 Sobic004G124400 Sobic003G403800--Sobic004G124400 Sobic003G403800--Sobic001G176700 Sobic006G049200 Sobic006G049200 Sobic006G122500--Sobic006G049200 Sobic006G122500--Sobic001G252401 Sobic006G122500--Sobic010G006300 Sobic006G122500--Sobic010G162500 Sobic004G289300 Sobic004G289300 Sobic006G122500--Sobic004G289300 Sobic004G342500 Sobic004G342500 Sobic006G122500--Sobic004G342500 Sobic006G122500--Sobic003G285600 Sobic006G122500--Sobic003G403800 Sobic001G193800 Sobic001G193800 Sobic006G122500--Sobic001G193800 Sobic007G080780--Sobic001G252401 Sobic001G071200 Sobic001G071200 Sobic007G080780--Sobic001G071200 Sobic003G284800 Sobic003G284800 Sobic007G080780--Sobic003G284800 Sobic003G255900 Sobic003G255900 Sobic007G080780--Sobic003G255900 Sobic004G099700 Sobic004G099700 Sobic007G080780--Sobic004G099700 Sobic006G014900 Sobic006G014900 Sobic007G080780--Sobic006G014900 Sobic007G080780--Sobic010G006300 Sobic006G123500 Sobic006G123500 Sobic007G080780--Sobic006G123500 Sobic006G093000 Sobic006G093000 Sobic007G080780--Sobic006G093000 Sobic006G076900 Sobic006G076900 Sobic001G276400--Sobic006G076900 Sobic001G445600 Sobic001G445600 Sobic001G276400--Sobic001G445600 Sobic001G276400--Sobic007G141300 Sobic001G276400--Sobic007G028200 Sobic008G035633 Sobic008G035633 Sobic001G276400--Sobic008G035633 Sobic009G069450 Sobic009G069450 Sobic001G276400--Sobic009G069450 Sobic008G157700 Sobic008G157700 Sobic001G276400--Sobic008G157700 Sobic003G079725 Sobic003G079725 Sobic001G276400--Sobic003G079725 Sobic002G130200 Sobic002G130200 Sobic001G276400--Sobic002G130200
Octagon: transcription factors


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