Gene annotation
Transcriptome id Sobic.001G276400.3,Sobic.001G276400.2,Sobic.001G276400.4,Sobic.001G276400.1
Synonym ATPTR1, PTR1, Sb01g027280
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1B6QLI7
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF152
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G62200 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os10g22560.2,LOC_Os10g22560.1,LOC_Os10g22560.3 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a003673 , Zm00025a003674
Brachypodium KQJ98771 , KQJ98773 , KQJ98772
Barley HORVU7Hr1G102170.8 , HORVU7Hr1G102170.9 , HORVU2Hr1G001320.8 , HORVU2Hr1G001320.9 , HORVU2Hr1G001320.6 , HORVU2Hr1G001320.7 , HORVU2Hr1G001320.4 , HORVU2Hr1G001320.5 , HORVU2Hr1G001320.3 , HORVU7Hr1G102170.2 , HORVU7Hr1G102170.3 , HORVU7Hr1G102170.12 , HORVU7Hr1G102170.10 , HORVU7Hr1G102170.11 , HORVU7Hr1G102170.4 , HORVU7Hr1G102170.5 , HORVU7Hr1G102170.6 , HORVU7Hr1G102170.1 , HORVU2Hr1G001380.1 , HORVU7Hr1G102170.7
Wheat TraesCS7D02G378300 , TraesCS6D02G353500 , TraesCS2A02G007500 , TraesCS2A02G007500 , TraesCS7B02G284300 , TraesCS7A02G381800 , TraesCS7B02G284300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G076900 anthocyanin regulatory Lc protein, putative, expressed -
2 Sobic.001G445600 DNA polymerase I, putative, expressed -
3 Sobic.007G141300 - -
4 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
5 Sobic.008G035633 - -
6 Sobic.009G069450 - -
7 Sobic.008G157700 BURP domain containing protein, expressed -
8 Sobic.003G079725 - -
9 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.005G093600 protein kinase domain containing protein, putative, expressed -
11 Sobic.003G128575 - -
12 Sobic.005G183450 - -
13 Sobic.006G017266 - -
14 Sobic.007G004750 - -
15 Sobic.006G020350 - -
16 Sobic.006G124850 - K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
17 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
18 Sobic.010G173600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
19 Sobic.003G290050 - -
20 Sobic.001G249900 - -


Gene co-expression network
sample Sobic001G276400 Sobic001G276400 Sobic006G076900 Sobic006G076900 Sobic001G276400--Sobic006G076900 Sobic001G445600 Sobic001G445600 Sobic001G276400--Sobic001G445600 Sobic007G141300 Sobic007G141300 Sobic001G276400--Sobic007G141300 Sobic007G028200 Sobic007G028200 Sobic001G276400--Sobic007G028200 Sobic008G035633 Sobic008G035633 Sobic001G276400--Sobic008G035633 Sobic009G069450 Sobic009G069450 Sobic001G276400--Sobic009G069450 Sobic008G157700 Sobic008G157700 Sobic001G276400--Sobic008G157700 Sobic003G079725 Sobic003G079725 Sobic001G276400--Sobic003G079725 Sobic002G130200 Sobic002G130200 Sobic001G276400--Sobic002G130200 Sobic006G076900--Sobic001G276400 Sobic001G073400 Sobic001G073400 Sobic006G076900--Sobic001G073400 Sobic006G076900--Sobic007G141300 Sobic001G293900 Sobic001G293900 Sobic006G076900--Sobic001G293900 Sobic003G119750 Sobic003G119750 Sobic006G076900--Sobic003G119750 Sobic002G322101 Sobic002G322101 Sobic006G076900--Sobic002G322101 Sobic006G076900--Sobic008G157700 Sobic007G004750 Sobic007G004750 Sobic006G076900--Sobic007G004750 Sobic003G354166 Sobic003G354166 Sobic006G076900--Sobic003G354166 Sobic004G208301 Sobic004G208301 Sobic001G445600--Sobic004G208301 Sobic001G445600--Sobic001G073400 Sobic001G138100 Sobic001G138100 Sobic001G445600--Sobic001G138100 Sobic004G337850 Sobic004G337850 Sobic001G445600--Sobic004G337850 Sobic001G445600--Sobic002G130200 Sobic009G123100 Sobic009G123100 Sobic001G445600--Sobic009G123100 Sobic006G057050 Sobic006G057050 Sobic001G445600--Sobic006G057050 Sobic003G169000 Sobic003G169000 Sobic001G445600--Sobic003G169000 Sobic004G087050 Sobic004G087050 Sobic001G445600--Sobic004G087050 Sobic007G141300--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic007G141300--Sobic003G097701 Sobic005G166900 Sobic005G166900 Sobic007G141300--Sobic005G166900 Sobic002G025000 Sobic002G025000 Sobic007G141300--Sobic002G025000 Sobic007G141650 Sobic007G141650 Sobic007G141300--Sobic007G141650 Sobic010G225400 Sobic010G225400 Sobic007G141300--Sobic010G225400 Sobic001G011600 Sobic001G011600 Sobic007G141300--Sobic001G011600 Sobic005G096450 Sobic005G096450 Sobic007G141300--Sobic005G096450 Sobic010G107901 Sobic010G107901 Sobic007G141300--Sobic010G107901 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic010G162500 Sobic010G162500 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic007G028200--Sobic002G025000 Sobic001G176700 Sobic001G176700 Sobic007G028200--Sobic001G176700 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic006G020350 Sobic006G020350 Sobic008G035633--Sobic006G020350 Sobic005G183450 Sobic005G183450 Sobic008G035633--Sobic005G183450 Sobic003G128575 Sobic003G128575 Sobic008G035633--Sobic003G128575 Sobic006G017266 Sobic006G017266 Sobic008G035633--Sobic006G017266 Sobic005G093600 Sobic005G093600 Sobic008G035633--Sobic005G093600 Sobic006G005550 Sobic006G005550 Sobic008G035633--Sobic006G005550 Sobic010G173600 Sobic010G173600 Sobic008G035633--Sobic010G173600 Sobic006G147350 Sobic006G147350 Sobic008G035633--Sobic006G147350 Sobic001G365332 Sobic001G365332 Sobic008G035633--Sobic001G365332 Sobic009G069450--Sobic005G183450 Sobic009G069450--Sobic006G020350 Sobic009G069450--Sobic006G017266 Sobic009G069450--Sobic003G128575 Sobic009G069450--Sobic008G157700 Sobic006G124850 Sobic006G124850 Sobic009G069450--Sobic006G124850 Sobic009G069450--Sobic006G147350 Sobic009G069450--Sobic005G093600 Sobic003G290050 Sobic003G290050 Sobic009G069450--Sobic003G290050 Sobic008G157700--Sobic006G124850 Sobic003G168350 Sobic003G168350 Sobic008G157700--Sobic003G168350 Sobic008G157700--Sobic003G128575 Sobic008G157700--Sobic006G017266 Sobic002G014900 Sobic002G014900 Sobic008G157700--Sobic002G014900 Sobic008G157700--Sobic005G183450 Sobic008G157700--Sobic006G020350 Sobic008G157700--Sobic001G293900 Sobic002G150032 Sobic002G150032 Sobic008G157700--Sobic002G150032 Sobic006G078450 Sobic006G078450 Sobic003G079725--Sobic006G078450 Sobic003G079725--Sobic006G017266 Sobic003G079725--Sobic006G020350 Sobic003G079725--Sobic003G128575 Sobic003G079725--Sobic005G183450 Sobic003G079725--Sobic005G093600 Sobic003G079725--Sobic009G069450 Sobic003G079725--Sobic001G365332 Sobic003G079725--Sobic010G173600 Sobic004G251400 Sobic004G251400 Sobic002G130200--Sobic004G251400 Sobic004G337600 Sobic004G337600 Sobic002G130200--Sobic004G337600 Sobic003G168500 Sobic003G168500 Sobic002G130200--Sobic003G168500 Sobic003G172900 Sobic003G172900 Sobic002G130200--Sobic003G172900 Sobic002G044500 Sobic002G044500 Sobic002G130200--Sobic002G044500 Sobic008G160300 Sobic008G160300 Sobic002G130200--Sobic008G160300 Sobic003G171900 Sobic003G171900 Sobic002G130200--Sobic003G171900 Sobic003G172850 Sobic003G172850 Sobic002G130200--Sobic003G172850 Sobic003G172400 Sobic003G172400 Sobic002G130200--Sobic003G172400
Octagon: transcription factors


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