Gene annotation
Transcriptome id Sobic.006G076900.3,Sobic.006G076900.6,Sobic.006G076900.4,Sobic.006G076900.2,Sobic.006G076900.10,Sobic.006G076900.7,Sobic.006G076900.9,Sobic.006G076900.5,Sobic.006G076900.8
Synonym GL3, Sb06g016380, MYC6.2
Functional annotation anthocyanin regulatory Lc protein, putative, expressed
UniProt A0A1Z5RCW5 , A0A1Z5RCV3 , Q41286 , A0A1Z5RCR7 , A0A1Z5RDN2 , A0A1B6PKU4
Pfam PF14215 PF00010 PF00010 PF14215
Panther DB PTHR11514:SF37 PTHR11514 PTHR11514 PTHR11514:SF37
NCBI CDD KOG3960; Myogenic helix-loop-helix transcription factor
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63650 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g47080.1 : anthocyanin regulatory Lc protein, putative, expressed
MaizeGDB (Corn) Zm00025a010250 , Zm00025a056836
Brachypodium -
Barley HORVU2Hr1G096810.4 , HORVU2Hr1G096810.5 , HORVU2Hr1G096810.6 , HORVU2Hr1G096810.1 , HORVU2Hr1G096810.2 , HORVU2Hr1G096810.3
Wheat TraesCS2D02G575600 , TraesCS2D02G575600 , TraesCS2D02G575600 , TraesCSU02G029400 , TraesCSU02G029400 , TraesCSU02G029400 , TraesCSU02G029400 , TraesCS2B02G428000 , TraesCS4B02G397400 , TraesCS4B02G397400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G276400 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.001G073400 expressed protein -
3 Sobic.007G141300 - -
4 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
5 Sobic.003G119750 - -
6 Sobic.002G322101 - -
7 Sobic.008G157700 BURP domain containing protein, expressed -
8 Sobic.007G004750 - -
9 Sobic.003G354166 - -
10 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.003G255850 - -
12 Sobic.003G079725 - -
13 Sobic.003G423400 OsFBX191 - F-box domain containing protein, expressed -
14 Sobic.005G093600 protein kinase domain containing protein, putative, expressed -
15 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
16 Sobic.006G124850 - K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
17 Sobic.010G173600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
18 Sobic.003G168800 photosystem II reaction center protein H, putative, expressed K02709: photosystem II PsbH protein
19 Sobic.009G069450 - -
20 Sobic.010G132200 inhibitor I family protein, putative, expressed -


Gene co-expression network
sample Sobic006G076900 Sobic006G076900 Sobic001G276400 Sobic001G276400 Sobic006G076900--Sobic001G276400 Sobic001G073400 Sobic001G073400 Sobic006G076900--Sobic001G073400 Sobic007G141300 Sobic007G141300 Sobic006G076900--Sobic007G141300 Sobic001G293900 Sobic001G293900 Sobic006G076900--Sobic001G293900 Sobic003G119750 Sobic003G119750 Sobic006G076900--Sobic003G119750 Sobic002G322101 Sobic002G322101 Sobic006G076900--Sobic002G322101 Sobic008G157700 Sobic008G157700 Sobic006G076900--Sobic008G157700 Sobic007G004750 Sobic007G004750 Sobic006G076900--Sobic007G004750 Sobic003G354166 Sobic003G354166 Sobic006G076900--Sobic003G354166 Sobic001G276400--Sobic006G076900 Sobic001G445600 Sobic001G445600 Sobic001G276400--Sobic001G445600 Sobic001G276400--Sobic007G141300 Sobic007G028200 Sobic007G028200 Sobic001G276400--Sobic007G028200 Sobic008G035633 Sobic008G035633 Sobic001G276400--Sobic008G035633 Sobic009G069450 Sobic009G069450 Sobic001G276400--Sobic009G069450 Sobic001G276400--Sobic008G157700 Sobic003G079725 Sobic003G079725 Sobic001G276400--Sobic003G079725 Sobic002G130200 Sobic002G130200 Sobic001G276400--Sobic002G130200 Sobic003G290200 Sobic003G290200 Sobic001G073400--Sobic003G290200 Sobic009G192200 Sobic009G192200 Sobic001G073400--Sobic009G192200 Sobic009G255000 Sobic009G255000 Sobic001G073400--Sobic009G255000 Sobic005G028500 Sobic005G028500 Sobic001G073400--Sobic005G028500 Sobic004G208301 Sobic004G208301 Sobic001G073400--Sobic004G208301 Sobic004G282933 Sobic004G282933 Sobic001G073400--Sobic004G282933 Sobic004G104200 Sobic004G104200 Sobic001G073400--Sobic004G104200 Sobic007G085900 Sobic007G085900 Sobic001G073400--Sobic007G085900 Sobic001G048500 Sobic001G048500 Sobic001G073400--Sobic001G048500 Sobic007G141300--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic007G141300--Sobic003G097701 Sobic005G166900 Sobic005G166900 Sobic007G141300--Sobic005G166900 Sobic002G025000 Sobic002G025000 Sobic007G141300--Sobic002G025000 Sobic007G141650 Sobic007G141650 Sobic007G141300--Sobic007G141650 Sobic010G225400 Sobic010G225400 Sobic007G141300--Sobic010G225400 Sobic001G011600 Sobic001G011600 Sobic007G141300--Sobic001G011600 Sobic005G096450 Sobic005G096450 Sobic007G141300--Sobic005G096450 Sobic010G107901 Sobic010G107901 Sobic007G141300--Sobic010G107901 Sobic001G293900--Sobic003G119750 Sobic010G132200 Sobic010G132200 Sobic001G293900--Sobic010G132200 Sobic003G169400 Sobic003G169400 Sobic001G293900--Sobic003G169400 Sobic003G168800 Sobic003G168800 Sobic001G293900--Sobic003G168800 Sobic003G172850 Sobic003G172850 Sobic001G293900--Sobic003G172850 Sobic003G423400 Sobic003G423400 Sobic001G293900--Sobic003G423400 Sobic006G124850 Sobic006G124850 Sobic001G293900--Sobic006G124850 Sobic006G192600 Sobic006G192600 Sobic001G293900--Sobic006G192600 Sobic003G168500 Sobic003G168500 Sobic001G293900--Sobic003G168500 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic003G119750--Sobic007G004750 Sobic003G119750--Sobic010G132200 Sobic003G119750--Sobic003G168800 Sobic003G119750--Sobic003G423400 Sobic003G119750--Sobic006G192600 Sobic001G128000 Sobic001G128000 Sobic003G119750--Sobic001G128000 Sobic003G119750--Sobic003G169400 Sobic006G093550 Sobic006G093550 Sobic002G322101--Sobic006G093550 Sobic007G149750 Sobic007G149750 Sobic002G322101--Sobic007G149750 Sobic004G234766 Sobic004G234766 Sobic002G322101--Sobic004G234766 Sobic010G173600 Sobic010G173600 Sobic002G322101--Sobic010G173600 Sobic003G255850 Sobic003G255850 Sobic002G322101--Sobic003G255850 Sobic006G147350 Sobic006G147350 Sobic002G322101--Sobic006G147350 Sobic001G249900 Sobic001G249900 Sobic002G322101--Sobic001G249900 Sobic002G397700 Sobic002G397700 Sobic002G322101--Sobic002G397700 Sobic002G322101--Sobic010G107901 Sobic008G157700--Sobic006G124850 Sobic003G168350 Sobic003G168350 Sobic008G157700--Sobic003G168350 Sobic003G128575 Sobic003G128575 Sobic008G157700--Sobic003G128575 Sobic006G017266 Sobic006G017266 Sobic008G157700--Sobic006G017266 Sobic002G014900 Sobic002G014900 Sobic008G157700--Sobic002G014900 Sobic005G183450 Sobic005G183450 Sobic008G157700--Sobic005G183450 Sobic006G020350 Sobic006G020350 Sobic008G157700--Sobic006G020350 Sobic008G157700--Sobic001G293900 Sobic002G150032 Sobic002G150032 Sobic008G157700--Sobic002G150032 Sobic007G004750--Sobic001G293900 Sobic007G004750--Sobic003G119750 Sobic007G004750--Sobic010G132200 Sobic007G004750--Sobic003G168800 Sobic007G004750--Sobic003G354166 Sobic007G004750--Sobic003G344300 Sobic007G004750--Sobic008G157700 Sobic007G004750--Sobic003G423400 Sobic007G004750--Sobic003G169400 Sobic003G354166--Sobic001G293900 Sobic003G354166--Sobic007G004750 Sobic003G354166--Sobic003G255850 Sobic003G354166--Sobic003G128575 Sobic003G354166--Sobic003G119750 Sobic003G354166--Sobic006G017266 Sobic003G354166--Sobic005G183450 Sobic003G354166--Sobic010G132200 Sobic003G354166--Sobic006G124850
Octagon: transcription factors


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