Gene annotation
Transcriptome id Sobic.008G193200.1
Synonym Sb08g023300
Functional annotation expressed protein
UniProt C5YTD8
Pfam PF13483
Panther DB PTHR36142 PTHR36142:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29700 : Metallo-hydrolase/oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os12g44370.1 : expressed protein
MaizeGDB (Corn) Zm00025a025059
Brachypodium -
Barley HORVU5Hr1G109210.1
Wheat -
Populus -


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cDNA sequences
Sobic.008G193200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G049000 - -
2 Sobic.003G403900 "domain confirmed by Pfam database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
3 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
4 Sobic.001G252401 - -
5 Sobic.010G188300 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
6 Sobic.010G042400 -(PubMedID : 26465154)@expressed protein -
7 Sobic.004G165700 expressed protein -
8 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
9 Sobic.010G006300 homeobox domain containing protein, expressed -
10 Sobic.001G331500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
13 Sobic.006G162200 NDH-M H PLASTOQUINONE DEHY, putative, expressed -
14 Sobic.008G065000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thylakoid lumenal 29.8 kDa protein, putative, expressed -
15 Sobic.005G101300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
16 Sobic.009G045600 pro-resilin precursor, putative, expressed -
17 Sobic.009G250400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed K03093: RNA polymerase sigma factor
18 Sobic.003G050000 thiol-disulphide oxidoreductase DCC, putative, expressed -
19 Sobic.006G158700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.006G151200 expressed protein -


Gene co-expression network
sample Sobic008G193200 Sobic008G193200 Sobic009G049000 Sobic009G049000 Sobic008G193200--Sobic009G049000 Sobic003G403900 Sobic003G403900 Sobic008G193200--Sobic003G403900 Sobic001G374400 Sobic001G374400 Sobic008G193200--Sobic001G374400 Sobic001G252401 Sobic001G252401 Sobic008G193200--Sobic001G252401 Sobic010G188300 Sobic010G188300 Sobic008G193200--Sobic010G188300 Sobic010G042400 Sobic010G042400 Sobic008G193200--Sobic010G042400 Sobic004G165700 Sobic004G165700 Sobic008G193200--Sobic004G165700 Sobic001G298400 Sobic001G298400 Sobic008G193200--Sobic001G298400 Sobic010G006300 Sobic010G006300 Sobic008G193200--Sobic010G006300 Sobic009G049000--Sobic008G193200 Sobic002G228400 Sobic002G228400 Sobic009G049000--Sobic002G228400 Sobic009G049000--Sobic001G374400 Sobic001G331500 Sobic001G331500 Sobic009G049000--Sobic001G331500 Sobic003G378500 Sobic003G378500 Sobic009G049000--Sobic003G378500 Sobic003G249400 Sobic003G249400 Sobic009G049000--Sobic003G249400 Sobic008G173700 Sobic008G173700 Sobic009G049000--Sobic008G173700 Sobic010G244000 Sobic010G244000 Sobic009G049000--Sobic010G244000 Sobic009G049000--Sobic001G298400 Sobic006G158700 Sobic006G158700 Sobic003G403900--Sobic006G158700 Sobic009G133700 Sobic009G133700 Sobic003G403900--Sobic009G133700 Sobic009G250400 Sobic009G250400 Sobic003G403900--Sobic009G250400 Sobic007G157300 Sobic007G157300 Sobic003G403900--Sobic007G157300 Sobic003G094100 Sobic003G094100 Sobic003G403900--Sobic003G094100 Sobic003G403900--Sobic004G165700 Sobic001G180200 Sobic001G180200 Sobic003G403900--Sobic001G180200 Sobic009G004100 Sobic009G004100 Sobic003G403900--Sobic009G004100 Sobic007G135800 Sobic007G135800 Sobic003G403900--Sobic007G135800 Sobic001G374400--Sobic008G193200 Sobic002G324700 Sobic002G324700 Sobic001G374400--Sobic002G324700 Sobic001G176700 Sobic001G176700 Sobic001G374400--Sobic001G176700 Sobic009G133800 Sobic009G133800 Sobic001G374400--Sobic009G133800 Sobic001G374400--Sobic001G298400 Sobic002G085400 Sobic002G085400 Sobic001G374400--Sobic002G085400 Sobic001G374400--Sobic009G049000 Sobic003G285600 Sobic003G285600 Sobic001G374400--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G374400--Sobic007G028200 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic003G403800 Sobic003G403800 Sobic001G252401--Sobic003G403800 Sobic001G252401--Sobic003G285600 Sobic007G080780 Sobic007G080780 Sobic001G252401--Sobic007G080780 Sobic010G162500 Sobic010G162500 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic007G161500 Sobic007G161500 Sobic010G188300--Sobic007G161500 Sobic005G056400 Sobic005G056400 Sobic010G188300--Sobic005G056400 Sobic010G039500 Sobic010G039500 Sobic010G188300--Sobic010G039500 Sobic003G127800 Sobic003G127800 Sobic010G188300--Sobic003G127800 Sobic003G367500 Sobic003G367500 Sobic010G188300--Sobic003G367500 Sobic001G289500 Sobic001G289500 Sobic010G188300--Sobic001G289500 Sobic004G305800 Sobic004G305800 Sobic010G188300--Sobic004G305800 Sobic001G491000 Sobic001G491000 Sobic010G188300--Sobic001G491000 Sobic003G024300 Sobic003G024300 Sobic010G188300--Sobic003G024300 Sobic003G230400 Sobic003G230400 Sobic010G042400--Sobic003G230400 Sobic006G238200 Sobic006G238200 Sobic010G042400--Sobic006G238200 Sobic003G419900 Sobic003G419900 Sobic010G042400--Sobic003G419900 Sobic003G398800 Sobic003G398800 Sobic010G042400--Sobic003G398800 Sobic002G370600 Sobic002G370600 Sobic010G042400--Sobic002G370600 Sobic003G408000 Sobic003G408000 Sobic010G042400--Sobic003G408000 Sobic003G431700 Sobic003G431700 Sobic010G042400--Sobic003G431700 Sobic004G308700 Sobic004G308700 Sobic010G042400--Sobic004G308700 Sobic010G042400--Sobic003G367500 Sobic004G165700--Sobic003G403900 Sobic004G165700--Sobic009G133700 Sobic004G165700--Sobic007G157300 Sobic004G165700--Sobic009G004100 Sobic004G165700--Sobic010G042400 Sobic003G203000 Sobic003G203000 Sobic004G165700--Sobic003G203000 Sobic004G165700--Sobic006G158700 Sobic009G237000 Sobic009G237000 Sobic004G165700--Sobic009G237000 Sobic009G024300 Sobic009G024300 Sobic004G165700--Sobic009G024300 Sobic010G104800 Sobic010G104800 Sobic001G298400--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic001G298400--Sobic001G073300 Sobic001G298400--Sobic001G331500 Sobic009G256100 Sobic009G256100 Sobic001G298400--Sobic009G256100 Sobic003G314000 Sobic003G314000 Sobic001G298400--Sobic003G314000 Sobic002G119100 Sobic002G119100 Sobic001G298400--Sobic002G119100 Sobic004G165500 Sobic004G165500 Sobic001G298400--Sobic004G165500 Sobic010G218200 Sobic010G218200 Sobic001G298400--Sobic010G218200 Sobic002G404800 Sobic002G404800 Sobic001G298400--Sobic002G404800 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic010G006300--Sobic003G403800 Sobic010G006300--Sobic006G122500 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400
Octagon: transcription factors


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