Gene annotation
Transcriptome id Sobic.003G050000.1
Synonym Sb03g004350
Functional annotation thiol-disulphide oxidoreductase DCC, putative, expressed
UniProt C5XNE4
Pfam PF04134
Panther DB PTHR33639 PTHR33639:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52590 : Putative thiol-disulphide oxidoreductase DCC
RAP-DB (Rice) LOC_Os01g07800.2 : thiol-disulphide oxidoreductase DCC, putative, expressed
MaizeGDB (Corn) Zm00025a023242
Brachypodium KQK02935
Barley -
Wheat TraesCS3A02G129300 , TraesCS3D02G130200 , TraesCS3B02G148400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G050000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G177400 amine oxidase, putative, expressed -
2 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
5 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
6 Sobic.007G016600 expressed protein -
7 Sobic.001G411100 expressed protein -
8 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G165700 expressed protein -
10 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
12 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.006G068900 expressed protein -
15 Sobic.003G304300 expressed protein -
16 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.002G213400 expressed protein -
18 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
19 Sobic.008G019400 Up-reguralion under heat(PubMedID : 24916767)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase


Gene co-expression network
sample Sobic003G050000 Sobic003G050000 Sobic006G177400 Sobic006G177400 Sobic003G050000--Sobic006G177400 Sobic003G403800 Sobic003G403800 Sobic003G050000--Sobic003G403800 Sobic003G285600 Sobic003G285600 Sobic003G050000--Sobic003G285600 Sobic001G018000 Sobic001G018000 Sobic003G050000--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic003G050000--Sobic004G268400 Sobic007G016600 Sobic007G016600 Sobic003G050000--Sobic007G016600 Sobic001G411100 Sobic001G411100 Sobic003G050000--Sobic001G411100 Sobic001G434000 Sobic001G434000 Sobic003G050000--Sobic001G434000 Sobic004G165700 Sobic004G165700 Sobic003G050000--Sobic004G165700 Sobic006G177400--Sobic003G050000 Sobic010G015500 Sobic010G015500 Sobic006G177400--Sobic010G015500 Sobic008G019400 Sobic008G019400 Sobic006G177400--Sobic008G019400 Sobic002G206600 Sobic002G206600 Sobic006G177400--Sobic002G206600 Sobic006G177400--Sobic001G434000 Sobic003G106900 Sobic003G106900 Sobic006G177400--Sobic003G106900 Sobic006G177400--Sobic001G018000 Sobic007G046100 Sobic007G046100 Sobic006G177400--Sobic007G046100 Sobic002G213400 Sobic002G213400 Sobic006G177400--Sobic002G213400 Sobic006G063900 Sobic006G063900 Sobic003G403800--Sobic006G063900 Sobic001G252401 Sobic001G252401 Sobic003G403800--Sobic001G252401 Sobic010G201600 Sobic010G201600 Sobic003G403800--Sobic010G201600 Sobic001G167900 Sobic001G167900 Sobic003G403800--Sobic001G167900 Sobic003G403800--Sobic003G050000 Sobic002G061900 Sobic002G061900 Sobic003G403800--Sobic002G061900 Sobic004G359600 Sobic004G359600 Sobic003G403800--Sobic004G359600 Sobic004G124400 Sobic004G124400 Sobic003G403800--Sobic004G124400 Sobic001G176700 Sobic001G176700 Sobic003G403800--Sobic001G176700 Sobic010G162200 Sobic010G162200 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic010G162500 Sobic010G162500 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic010G006300 Sobic010G006300 Sobic003G285600--Sobic010G006300 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic007G028200 Sobic007G028200 Sobic003G285600--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic003G285600--Sobic003G097701 Sobic001G018000--Sobic004G268400 Sobic002G351200 Sobic002G351200 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic010G101000 Sobic010G101000 Sobic001G018000--Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic003G304300 Sobic003G304300 Sobic001G018000--Sobic003G304300 Sobic003G186800 Sobic003G186800 Sobic001G018000--Sobic003G186800 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic003G380200 Sobic003G380200 Sobic004G268400--Sobic003G380200 Sobic007G016600--Sobic004G268400 Sobic007G016600--Sobic004G267700 Sobic007G016600--Sobic001G018000 Sobic007G016600--Sobic003G304300 Sobic007G016600--Sobic002G351200 Sobic007G016600--Sobic010G100900 Sobic010G207100 Sobic010G207100 Sobic007G016600--Sobic010G207100 Sobic007G016600--Sobic003G186800 Sobic007G016600--Sobic003G380200 Sobic007G124500 Sobic007G124500 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic003G103300 Sobic003G103300 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700 Sobic001G434000--Sobic002G351200 Sobic006G020300 Sobic006G020300 Sobic001G434000--Sobic006G020300 Sobic001G434000--Sobic001G018000 Sobic001G434000--Sobic002G030900 Sobic001G434000--Sobic002G213400 Sobic001G434000--Sobic010G101000 Sobic010G104700 Sobic010G104700 Sobic001G434000--Sobic010G104700 Sobic001G434000--Sobic004G267700 Sobic001G434000--Sobic001G411100 Sobic003G403900 Sobic003G403900 Sobic004G165700--Sobic003G403900 Sobic009G133700 Sobic009G133700 Sobic004G165700--Sobic009G133700 Sobic007G157300 Sobic007G157300 Sobic004G165700--Sobic007G157300 Sobic009G004100 Sobic009G004100 Sobic004G165700--Sobic009G004100 Sobic010G042400 Sobic010G042400 Sobic004G165700--Sobic010G042400 Sobic003G203000 Sobic003G203000 Sobic004G165700--Sobic003G203000 Sobic006G158700 Sobic006G158700 Sobic004G165700--Sobic006G158700 Sobic009G237000 Sobic009G237000 Sobic004G165700--Sobic009G237000 Sobic009G024300 Sobic009G024300 Sobic004G165700--Sobic009G024300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.