Gene annotation
Transcriptome id Sobic.006G177400.1
Synonym PDS, PDS3, PDE226, Sb06g025210
Functional annotation amine oxidase, putative, expressed
UniProt C5YDX8
Pfam PF01593
Panther DB PTHR10742 PTHR10742:SF290
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G14210 : phytoene desaturase 3
RAP-DB (Rice) LOC_Os04g47290.3 : amine oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a010223
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G050000 thiol-disulphide oxidoreductase DCC, putative, expressed -
2 Sobic.010G015500 oligopeptide transporter, putative, expressed -
3 Sobic.008G019400 Up-reguralion under heat(PubMedID : 24916767)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.002G206600 class I glutamine amidotransferase, putative, expressed -
5 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G106900 expressed protein -
7 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
8 Sobic.007G046100 CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
9 Sobic.002G213400 expressed protein -
10 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
11 Sobic.007G016600 expressed protein -
12 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
14 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
15 Sobic.004G107500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium channel KAT1, putative, expressed -
16 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
18 Sobic.003G304300 expressed protein -
19 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
20 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G177400 Sobic006G177400 Sobic003G050000 Sobic003G050000 Sobic006G177400--Sobic003G050000 Sobic010G015500 Sobic010G015500 Sobic006G177400--Sobic010G015500 Sobic008G019400 Sobic008G019400 Sobic006G177400--Sobic008G019400 Sobic002G206600 Sobic002G206600 Sobic006G177400--Sobic002G206600 Sobic001G434000 Sobic001G434000 Sobic006G177400--Sobic001G434000 Sobic003G106900 Sobic003G106900 Sobic006G177400--Sobic003G106900 Sobic001G018000 Sobic001G018000 Sobic006G177400--Sobic001G018000 Sobic007G046100 Sobic007G046100 Sobic006G177400--Sobic007G046100 Sobic002G213400 Sobic002G213400 Sobic006G177400--Sobic002G213400 Sobic003G050000--Sobic006G177400 Sobic003G403800 Sobic003G403800 Sobic003G050000--Sobic003G403800 Sobic003G285600 Sobic003G285600 Sobic003G050000--Sobic003G285600 Sobic003G050000--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic003G050000--Sobic004G268400 Sobic007G016600 Sobic007G016600 Sobic003G050000--Sobic007G016600 Sobic001G411100 Sobic001G411100 Sobic003G050000--Sobic001G411100 Sobic003G050000--Sobic001G434000 Sobic004G165700 Sobic004G165700 Sobic003G050000--Sobic004G165700 Sobic003G133700 Sobic003G133700 Sobic010G015500--Sobic003G133700 Sobic010G015500--Sobic006G177400 Sobic004G346000 Sobic004G346000 Sobic010G015500--Sobic004G346000 Sobic001G184300 Sobic001G184300 Sobic010G015500--Sobic001G184300 Sobic002G198700 Sobic002G198700 Sobic010G015500--Sobic002G198700 Sobic001G173400 Sobic001G173400 Sobic010G015500--Sobic001G173400 Sobic006G074500 Sobic006G074500 Sobic010G015500--Sobic006G074500 Sobic004G107500 Sobic004G107500 Sobic010G015500--Sobic004G107500 Sobic002G430100 Sobic002G430100 Sobic010G015500--Sobic002G430100 Sobic002G052100 Sobic002G052100 Sobic008G019400--Sobic002G052100 Sobic003G339200 Sobic003G339200 Sobic008G019400--Sobic003G339200 Sobic004G214800 Sobic004G214800 Sobic008G019400--Sobic004G214800 Sobic010G271800 Sobic010G271800 Sobic008G019400--Sobic010G271800 Sobic001G181100 Sobic001G181100 Sobic008G019400--Sobic001G181100 Sobic001G112900 Sobic001G112900 Sobic008G019400--Sobic001G112900 Sobic003G326000 Sobic003G326000 Sobic008G019400--Sobic003G326000 Sobic002G338800 Sobic002G338800 Sobic008G019400--Sobic002G338800 Sobic002G052000 Sobic002G052000 Sobic008G019400--Sobic002G052000 Sobic007G044201 Sobic007G044201 Sobic002G206600--Sobic007G044201 Sobic002G206600--Sobic003G106900 Sobic002G206600--Sobic006G177400 Sobic001G289000 Sobic001G289000 Sobic002G206600--Sobic001G289000 Sobic003G016700 Sobic003G016700 Sobic002G206600--Sobic003G016700 Sobic010G133500 Sobic010G133500 Sobic002G206600--Sobic010G133500 Sobic003G188900 Sobic003G188900 Sobic002G206600--Sobic003G188900 Sobic001G502300 Sobic001G502300 Sobic002G206600--Sobic001G502300 Sobic001G172050 Sobic001G172050 Sobic002G206600--Sobic001G172050 Sobic002G351200 Sobic002G351200 Sobic001G434000--Sobic002G351200 Sobic006G020300 Sobic006G020300 Sobic001G434000--Sobic006G020300 Sobic001G434000--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G434000--Sobic002G030900 Sobic001G434000--Sobic002G213400 Sobic010G101000 Sobic010G101000 Sobic001G434000--Sobic010G101000 Sobic010G104700 Sobic010G104700 Sobic001G434000--Sobic010G104700 Sobic004G267700 Sobic004G267700 Sobic001G434000--Sobic004G267700 Sobic001G434000--Sobic001G411100 Sobic003G106900--Sobic002G206600 Sobic003G106900--Sobic003G339200 Sobic003G106900--Sobic010G271800 Sobic003G304300 Sobic003G304300 Sobic003G106900--Sobic003G304300 Sobic004G344600 Sobic004G344600 Sobic003G106900--Sobic004G344600 Sobic003G106900--Sobic007G044201 Sobic002G161400 Sobic002G161400 Sobic003G106900--Sobic002G161400 Sobic003G106900--Sobic001G112900 Sobic003G106900--Sobic010G104700 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic003G186800 Sobic003G186800 Sobic001G018000--Sobic003G186800 Sobic004G221000 Sobic004G221000 Sobic007G046100--Sobic004G221000 Sobic007G046100--Sobic006G177400 Sobic007G046100--Sobic002G206600 Sobic007G116700 Sobic007G116700 Sobic007G046100--Sobic007G116700 Sobic004G227600 Sobic004G227600 Sobic007G046100--Sobic004G227600 Sobic001G207100 Sobic001G207100 Sobic007G046100--Sobic001G207100 Sobic001G167100 Sobic001G167100 Sobic007G046100--Sobic001G167100 Sobic007G046100--Sobic003G133700 Sobic007G046100--Sobic003G106900 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic002G213400--Sobic001G018000 Sobic002G213400--Sobic007G016600 Sobic002G213400--Sobic001G434000 Sobic010G100900 Sobic010G100900 Sobic002G213400--Sobic010G100900 Sobic002G213400--Sobic004G268400 Sobic007G124500 Sobic007G124500 Sobic002G213400--Sobic007G124500 Sobic002G213400--Sobic003G304300
Octagon: transcription factors


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