Gene annotation
| Transcriptome id | Sobic.003G133700.1,Sobic.003G133700.2 |
|---|---|
| Synonym | 1, PHT4, ANTR1, Sb03g011370 |
| Functional annotation | transporter, major facilitator family, putative, expressed |
| UniProt | C5XHC5 |
| Pfam | PF07690 |
| Panther DB | PTHR11662 PTHR11662:SF312 |
| NCBI CDD | KOG2532; Permease of the major facilitator superfamily |
| KEGG Orthology | K08193; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other |
| Gene Ontology | GO:0016021; integral component of membrane |
Orthologs (automatic annotation)
| TAIR | AT2G29650 : phosphate transporter 4;1 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g17240.1 : transporter, major facilitator family, putative, expressed |
| MaizeGDB (Corn) | Zm00025a035192 |
| Brachypodium | KQK03951 , KQK03950 |
| Barley | HORVU3Hr1G042770.35 , HORVU3Hr1G042770.34 , HORVU3Hr1G042770.33 , HORVU3Hr1G042770.32 , HORVU3Hr1G042770.31 , HORVU3Hr1G042770.30 , HORVU3Hr1G042770.28 , HORVU3Hr1G042770.29 , HORVU3Hr1G042770.24 , HORVU3Hr1G042770.26 , HORVU3Hr1G042770.27 , HORVU3Hr1G042770.20 , HORVU3Hr1G042770.21 , HORVU3Hr1G042770.22 , HORVU3Hr1G042770.23 , HORVU3Hr1G042770.11 , HORVU3Hr1G042770.10 , HORVU3Hr1G042770.13 , HORVU3Hr1G042770.12 , HORVU3Hr1G042770.15 , HORVU3Hr1G042770.14 , HORVU3Hr1G042770.17 , HORVU3Hr1G042770.16 , HORVU3Hr1G042770.19 , HORVU3Hr1G042770.18 , HORVU3Hr1G042770.4 , HORVU3Hr1G042770.7 , HORVU3Hr1G042770.6 , HORVU3Hr1G042770.1 , HORVU3Hr1G042770.3 , HORVU3Hr1G042770.2 , HORVU3Hr1G042770.9 , HORVU3Hr1G042770.8 |
| Wheat | TraesCS3B02G220200 , TraesCS3A02G190800 , TraesCS3D02G194700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G050800 | Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed | K15283: solute carrier family 35, member E1 |
| 2 | Sobic.006G074500 | protein of unknown function DUF1279 domain containing protein, expressed | - |
| 3 | Sobic.006G101600 | photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed | K12118: cryptochrome 1 |
| 4 | Sobic.004G224000 | - | - |
| 5 | Sobic.002G430100 | omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed | K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase |
| 6 | Sobic.010G249600 | macrophage migration inhibitory factor, putative, expressed | - |
| 7 | Sobic.007G077466 | - | - |
| 8 | Sobic.001G184300 | potassium transporter, putative, expressed | K03549: KUP system potassium uptake protein |
| 9 | Sobic.009G213900 | exostosin, putative, expressed | - |
| 10 | Sobic.003G149400 | lipase, putative, expressed | - |
| 11 | Sobic.003G347520 | - | - |
| 12 | Sobic.003G225200 | CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K13412: calcium-dependent protein kinase |
| 13 | Sobic.001G442000 | Ser/Thr protein phosphatase family protein, putative, expressed | K14379: tartrate-resistant acid phosphatase type 5 |
| 14 | Sobic.001G503700 | DUF677 domain containing protein, putative, expressed | - |
| 15 | Sobic.008G016400 | - | - |
| 16 | Sobic.003G440500 | YGGT family protein, putative, expressed | K02221: YggT family protein |
| 17 | Sobic.008G192900 | -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed | - |
| 18 | Sobic.002G085600 | - | - |
| 19 | Sobic.001G424650 | - | - |
| 20 | Sobic.009G149600 | transmembrane protein 18, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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