Gene annotation
Transcriptome id Sobic.006G074500.1
Synonym Sb06g016180
Functional annotation protein of unknown function DUF1279 domain containing protein, expressed
UniProt C5YG99
Pfam PF06916
Panther DB PTHR21377 PTHR21377:SF3
NCBI CDD KOG4526; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27290 : Protein of unknown function (DUF1279)
RAP-DB (Rice) LOC_Os04g33940.1 : protein of unknown function DUF1279 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011478 , Zm00025a056014
Brachypodium KQJ82554
Barley HORVU2Hr1G073740.5 , HORVU2Hr1G073740.4 , HORVU2Hr1G073740.6 , HORVU2Hr1G073740.1 , HORVU2Hr1G073740.3 , HORVU2Hr1G073740.2
Wheat TraesCS2B02G313500 , TraesCS2A02G297300 , TraesCS2D02G295200
Populus -


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cDNA sequences
Sobic.006G074500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
2 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
3 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
4 Sobic.003G050800 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed K15283: solute carrier family 35, member E1
5 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
6 Sobic.009G223900 protein binding protein, putative, expressed -
7 Sobic.002G187900 expressed protein -
8 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
9 Sobic.003G365200 expressed protein -
10 Sobic.002G430100 omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
11 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
12 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
13 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
14 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
15 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
16 Sobic.009G080000 OsSPL15 - SBP-box gene family member, expressed -
17 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
18 Sobic.004G224000 - -
19 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
20 Sobic.003G263900 reticulon domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G074500 Sobic006G074500 Sobic002G377400 Sobic002G377400 Sobic006G074500--Sobic002G377400 Sobic003G440500 Sobic003G440500 Sobic006G074500--Sobic003G440500 Sobic003G133700 Sobic003G133700 Sobic006G074500--Sobic003G133700 Sobic003G050800 Sobic003G050800 Sobic006G074500--Sobic003G050800 Sobic002G398600 Sobic002G398600 Sobic006G074500--Sobic002G398600 Sobic009G223900 Sobic009G223900 Sobic006G074500--Sobic009G223900 Sobic002G187900 Sobic002G187900 Sobic006G074500--Sobic002G187900 Sobic010G249600 Sobic010G249600 Sobic006G074500--Sobic010G249600 Sobic003G365200 Sobic003G365200 Sobic006G074500--Sobic003G365200 Sobic003G308900 Sobic003G308900 Sobic002G377400--Sobic003G308900 Sobic007G185000 Sobic007G185000 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic003G243750 Sobic003G243750 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic003G440500--Sobic010G249600 Sobic003G440500--Sobic002G377400 Sobic003G440500--Sobic009G223900 Sobic005G025400 Sobic005G025400 Sobic003G440500--Sobic005G025400 Sobic003G440500--Sobic007G185000 Sobic010G242000 Sobic010G242000 Sobic003G440500--Sobic010G242000 Sobic003G440500--Sobic003G308900 Sobic002G399000 Sobic002G399000 Sobic003G440500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic003G440500--Sobic009G181900 Sobic003G133700--Sobic003G050800 Sobic003G133700--Sobic006G074500 Sobic006G101600 Sobic006G101600 Sobic003G133700--Sobic006G101600 Sobic004G224000 Sobic004G224000 Sobic003G133700--Sobic004G224000 Sobic002G430100 Sobic002G430100 Sobic003G133700--Sobic002G430100 Sobic003G133700--Sobic010G249600 Sobic007G077466 Sobic007G077466 Sobic003G133700--Sobic007G077466 Sobic001G184300 Sobic001G184300 Sobic003G133700--Sobic001G184300 Sobic009G213900 Sobic009G213900 Sobic003G133700--Sobic009G213900 Sobic001G367900 Sobic001G367900 Sobic003G050800--Sobic001G367900 Sobic003G149400 Sobic003G149400 Sobic003G050800--Sobic003G149400 Sobic003G050800--Sobic008G065700 Sobic007G010400 Sobic007G010400 Sobic003G050800--Sobic007G010400 Sobic003G050800--Sobic007G077466 Sobic003G050800--Sobic004G224000 Sobic007G226000 Sobic007G226000 Sobic003G050800--Sobic007G226000 Sobic002G234800 Sobic002G234800 Sobic003G050800--Sobic002G234800 Sobic003G050800--Sobic003G133700 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic004G173200 Sobic004G173200 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic002G001500 Sobic002G001500 Sobic009G223900--Sobic002G001500 Sobic004G181000 Sobic004G181000 Sobic009G223900--Sobic004G181000 Sobic003G362800 Sobic003G362800 Sobic009G223900--Sobic003G362800 Sobic003G155800 Sobic003G155800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic001G113400 Sobic001G113400 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic002G187900--Sobic003G263900 Sobic006G255200 Sobic006G255200 Sobic002G187900--Sobic006G255200 Sobic004G127600 Sobic004G127600 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic001G109400 Sobic001G109400 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic010G249600--Sobic003G440500 Sobic010G249600--Sobic002G398600 Sobic010G249600--Sobic002G377400 Sobic010G249600--Sobic003G308900 Sobic010G249600--Sobic008G016800 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic010G249600--Sobic004G224000 Sobic001G191300 Sobic001G191300 Sobic010G249600--Sobic001G191300 Sobic003G253700 Sobic003G253700 Sobic003G365200--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic003G365200--Sobic003G155000 Sobic001G520000 Sobic001G520000 Sobic003G365200--Sobic001G520000 Sobic006G134300 Sobic006G134300 Sobic003G365200--Sobic006G134300 Sobic010G012200 Sobic010G012200 Sobic003G365200--Sobic010G012200 Sobic003G365200--Sobic003G262600 Sobic003G365200--Sobic003G155800 Sobic003G365200--Sobic004G227700 Sobic003G365200--Sobic006G249600
Octagon: transcription factors


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