Gene annotation
Transcriptome id Sobic.004G107500.3,Sobic.004G107500.1
Synonym KAT1, Sb04g008780
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
potassium channel KAT1, putative, expressed
UniProt A0A1Z5RLS3 , C5XZ04
Pfam PF07885 PF00027 PF11834 PF00027 PF00520 PF11834
Panther DB PTHR10217 PTHR10217:SF520
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006811ion transport GO:0005216ion channel activity


Orthologs (automatic annotation)
TAIR AT5G46240 : potassium channel in Arabidopsis thaliana 1
RAP-DB (Rice) LOC_Os02g14840.1 : potassium channel KAT1, putative, expressed
MaizeGDB (Corn) Zm00025a019984 , Zm00025a034468
Brachypodium KQJ94221
Barley HORVU3Hr1G028670.34 , HORVU3Hr1G028670.35 , HORVU3Hr1G028670.36 , HORVU3Hr1G028670.37 , HORVU3Hr1G028670.30 , HORVU3Hr1G028670.31 , HORVU3Hr1G028670.32 , HORVU3Hr1G028670.33 , HORVU3Hr1G028670.18 , HORVU3Hr1G028670.19 , HORVU3Hr1G028670.16 , HORVU3Hr1G028670.17 , HORVU3Hr1G028670.14 , HORVU3Hr1G028670.15 , HORVU3Hr1G028670.12 , HORVU3Hr1G028670.13 , HORVU3Hr1G028670.10 , HORVU3Hr1G028670.11 , HORVU3Hr1G028670.8 , HORVU3Hr1G028670.9 , HORVU3Hr1G028670.4 , HORVU3Hr1G028670.5 , HORVU3Hr1G028670.6 , HORVU3Hr1G028670.7 , HORVU3Hr1G028670.1 , HORVU3Hr1G028670.2 , HORVU3Hr1G028670.3 , HORVU3Hr1G028670.22 , HORVU3Hr1G028670.27 , HORVU3Hr1G028670.26 , HORVU3Hr1G028670.25 , HORVU3Hr1G028670.24 , HORVU3Hr1G028670.23 , HORVU3Hr1G028670.21 , HORVU3Hr1G028670.20 , HORVU3Hr1G028670.29 , HORVU3Hr1G028670.28 , HORVU3Hr1G028670.38 , HORVU3Hr1G028670.39 , HORVU3Hr1G028670.41 , HORVU3Hr1G028670.40 , HORVU3Hr1G028670.43 , HORVU3Hr1G028670.42
Wheat TraesCS6D02G152200 , TraesCS6B02G190900 , TraesCS6D02G152200 , TraesCS6A02G160500 , TraesCS6A02G160500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G184300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.006G128500 osFTL6 FT-Like6 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
3 Sobic.010G019200 - -
4 Sobic.004G227600 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
5 Sobic.006G177400 amine oxidase, putative, expressed -
6 Sobic.003G016700 OsFBX380 - F-box domain containing protein, expressed -
7 Sobic.005G057700 expressed protein -
8 Sobic.006G074500 protein of unknown function DUF1279 domain containing protein, expressed -
9 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
10 Sobic.001G470700 - -
11 Sobic.009G041400 rp1, putative, expressed -
12 Sobic.003G287600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
13 Sobic.008G005900 nodulin, putative, expressed -
14 Sobic.008G086700 CRAL/TRIO domain containing protein, expressed -
15 Sobic.001G139500 - -
16 Sobic.001G536901 - -
17 Sobic.002G198700 up-regulated under drought stress(PubMedID : 24655390)@expressed protein -
18 Sobic.006G048400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G304800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
20 Sobic.010G015500 oligopeptide transporter, putative, expressed -


Gene co-expression network
sample Sobic004G107500 Sobic004G107500 Sobic001G184300 Sobic001G184300 Sobic004G107500--Sobic001G184300 Sobic006G128500 Sobic006G128500 Sobic004G107500--Sobic006G128500 Sobic010G019200 Sobic010G019200 Sobic004G107500--Sobic010G019200 Sobic004G227600 Sobic004G227600 Sobic004G107500--Sobic004G227600 Sobic006G177400 Sobic006G177400 Sobic004G107500--Sobic006G177400 Sobic003G016700 Sobic003G016700 Sobic004G107500--Sobic003G016700 Sobic005G057700 Sobic005G057700 Sobic004G107500--Sobic005G057700 Sobic006G074500 Sobic006G074500 Sobic004G107500--Sobic006G074500 Sobic003G133700 Sobic003G133700 Sobic004G107500--Sobic003G133700 Sobic009G041400 Sobic009G041400 Sobic001G184300--Sobic009G041400 Sobic001G184300--Sobic004G107500 Sobic003G137200 Sobic003G137200 Sobic001G184300--Sobic003G137200 Sobic001G184300--Sobic003G133700 Sobic001G184300--Sobic004G227600 Sobic001G184300--Sobic006G074500 Sobic006G101600 Sobic006G101600 Sobic001G184300--Sobic006G101600 Sobic003G050800 Sobic003G050800 Sobic001G184300--Sobic003G050800 Sobic010G261500 Sobic010G261500 Sobic001G184300--Sobic010G261500 Sobic006G128500--Sobic010G019200 Sobic006G128500--Sobic004G107500 Sobic002G198700 Sobic002G198700 Sobic006G128500--Sobic002G198700 Sobic006G128500--Sobic005G057700 Sobic008G005900 Sobic008G005900 Sobic006G128500--Sobic008G005900 Sobic006G128500--Sobic001G184300 Sobic002G326300 Sobic002G326300 Sobic006G128500--Sobic002G326300 Sobic004G030200 Sobic004G030200 Sobic006G128500--Sobic004G030200 Sobic001G174200 Sobic001G174200 Sobic006G128500--Sobic001G174200 Sobic008G094150 Sobic008G094150 Sobic010G019200--Sobic008G094150 Sobic004G100000 Sobic004G100000 Sobic010G019200--Sobic004G100000 Sobic010G019200--Sobic008G005900 Sobic006G049200 Sobic006G049200 Sobic010G019200--Sobic006G049200 Sobic003G080000 Sobic003G080000 Sobic010G019200--Sobic003G080000 Sobic001G087800 Sobic001G087800 Sobic010G019200--Sobic001G087800 Sobic010G019200--Sobic006G128500 Sobic001G470700 Sobic001G470700 Sobic010G019200--Sobic001G470700 Sobic005G173100 Sobic005G173100 Sobic010G019200--Sobic005G173100 Sobic008G192900 Sobic008G192900 Sobic004G227600--Sobic008G192900 Sobic007G075600 Sobic007G075600 Sobic004G227600--Sobic007G075600 Sobic001G442000 Sobic001G442000 Sobic004G227600--Sobic001G442000 Sobic001G454600 Sobic001G454600 Sobic004G227600--Sobic001G454600 Sobic005G068000 Sobic005G068000 Sobic004G227600--Sobic005G068000 Sobic004G218400 Sobic004G218400 Sobic004G227600--Sobic004G218400 Sobic004G072201 Sobic004G072201 Sobic004G227600--Sobic004G072201 Sobic004G127600 Sobic004G127600 Sobic004G227600--Sobic004G127600 Sobic003G067600 Sobic003G067600 Sobic004G227600--Sobic003G067600 Sobic003G050000 Sobic003G050000 Sobic006G177400--Sobic003G050000 Sobic010G015500 Sobic010G015500 Sobic006G177400--Sobic010G015500 Sobic008G019400 Sobic008G019400 Sobic006G177400--Sobic008G019400 Sobic002G206600 Sobic002G206600 Sobic006G177400--Sobic002G206600 Sobic001G434000 Sobic001G434000 Sobic006G177400--Sobic001G434000 Sobic003G106900 Sobic003G106900 Sobic006G177400--Sobic003G106900 Sobic001G018000 Sobic001G018000 Sobic006G177400--Sobic001G018000 Sobic007G046100 Sobic007G046100 Sobic006G177400--Sobic007G046100 Sobic002G213400 Sobic002G213400 Sobic006G177400--Sobic002G213400 Sobic007G044201 Sobic007G044201 Sobic003G016700--Sobic007G044201 Sobic003G016700--Sobic002G206600 Sobic003G016700--Sobic004G107500 Sobic004G115950 Sobic004G115950 Sobic003G016700--Sobic004G115950 Sobic003G016700--Sobic002G198700 Sobic003G361000 Sobic003G361000 Sobic003G016700--Sobic003G361000 Sobic006G146150 Sobic006G146150 Sobic003G016700--Sobic006G146150 Sobic003G016700--Sobic006G128500 Sobic001G195866 Sobic001G195866 Sobic003G016700--Sobic001G195866 Sobic003G386500 Sobic003G386500 Sobic005G057700--Sobic003G386500 Sobic005G057700--Sobic003G080000 Sobic010G138800 Sobic010G138800 Sobic005G057700--Sobic010G138800 Sobic005G057700--Sobic004G030200 Sobic005G057700--Sobic003G106900 Sobic009G018600 Sobic009G018600 Sobic005G057700--Sobic009G018600 Sobic006G235400 Sobic006G235400 Sobic005G057700--Sobic006G235400 Sobic008G115700 Sobic008G115700 Sobic005G057700--Sobic008G115700 Sobic004G128900 Sobic004G128900 Sobic005G057700--Sobic004G128900 Sobic002G377400 Sobic002G377400 Sobic006G074500--Sobic002G377400 Sobic003G440500 Sobic003G440500 Sobic006G074500--Sobic003G440500 Sobic006G074500--Sobic003G133700 Sobic006G074500--Sobic003G050800 Sobic002G398600 Sobic002G398600 Sobic006G074500--Sobic002G398600 Sobic009G223900 Sobic009G223900 Sobic006G074500--Sobic009G223900 Sobic002G187900 Sobic002G187900 Sobic006G074500--Sobic002G187900 Sobic010G249600 Sobic010G249600 Sobic006G074500--Sobic010G249600 Sobic003G365200 Sobic003G365200 Sobic006G074500--Sobic003G365200 Sobic003G133700--Sobic003G050800 Sobic003G133700--Sobic006G074500 Sobic003G133700--Sobic006G101600 Sobic004G224000 Sobic004G224000 Sobic003G133700--Sobic004G224000 Sobic002G430100 Sobic002G430100 Sobic003G133700--Sobic002G430100 Sobic003G133700--Sobic010G249600 Sobic007G077466 Sobic007G077466 Sobic003G133700--Sobic007G077466 Sobic003G133700--Sobic001G184300 Sobic009G213900 Sobic009G213900 Sobic003G133700--Sobic009G213900
Octagon: transcription factors


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