Gene annotation
Transcriptome id Sobic.001G536901.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBY5
Pfam PF03040
Panther DB PTHR33650 PTHR33650:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G31040 : CemA-like proton extrusion protein-related
RAP-DB (Rice) LOC_Os08g12780.4 : chloroplast envelope membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a000164 , Zm00025a053547
Brachypodium KQJ95620 , KQJ95621
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G252401 - -
2 Sobic.001G410700 PPR repeat domain containing protein, putative, expressed -
3 Sobic.009G137300 - -
4 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.010G201600 tic21, putative, expressed -
6 Sobic.004G342500 uncharacterized protein yqjG, putative, expressed K07393: ECM4, glutathionyl-hydroquinone reductase
7 Sobic.003G318300 pentatricopeptide repeat domain containing protein, putative, expressed -
8 Sobic.001G093500 expressed protein -
9 Sobic.005G101300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
10 Sobic.002G199000 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed K00592: [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase
11 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
12 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
13 Sobic.006G122500 methyltransferase domain containing protein, expressed -
14 Sobic.006G207700 containing DUF163, putative, expressed K00783: 23S rRNA (pseudouridine1915-N3)-methyltransferase
15 Sobic.002G331100 peptide chain release factor protein, putative, expressed K02836: peptide chain release factor 2
16 Sobic.006G049200 violaxanthin de-epoxidase, putative, expressed K09839: VDE, violaxanthin de-epoxidase
17 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
18 Sobic.010G039500 genetic modifier, putative, expressed -
19 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G074000 lycopene beta cyclase, chloroplast precursor, putative, expressed K06443: lcyB, crtL1, lycopene beta-cyclase


Gene co-expression network
sample Sobic001G536901 Sobic001G536901 Sobic001G252401 Sobic001G252401 Sobic001G536901--Sobic001G252401 Sobic001G410700 Sobic001G410700 Sobic001G536901--Sobic001G410700 Sobic009G137300 Sobic009G137300 Sobic001G536901--Sobic009G137300 Sobic003G403800 Sobic003G403800 Sobic001G536901--Sobic003G403800 Sobic010G201600 Sobic010G201600 Sobic001G536901--Sobic010G201600 Sobic004G342500 Sobic004G342500 Sobic001G536901--Sobic004G342500 Sobic003G318300 Sobic003G318300 Sobic001G536901--Sobic003G318300 Sobic001G093500 Sobic001G093500 Sobic001G536901--Sobic001G093500 Sobic005G101300 Sobic005G101300 Sobic001G536901--Sobic005G101300 Sobic010G006300 Sobic010G006300 Sobic001G252401--Sobic010G006300 Sobic001G252401--Sobic001G536901 Sobic001G252401--Sobic003G403800 Sobic003G285600 Sobic003G285600 Sobic001G252401--Sobic003G285600 Sobic007G080780 Sobic007G080780 Sobic001G252401--Sobic007G080780 Sobic010G162500 Sobic010G162500 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic001G252401--Sobic005G101300 Sobic002G331100 Sobic002G331100 Sobic001G410700--Sobic002G331100 Sobic002G199000 Sobic002G199000 Sobic001G410700--Sobic002G199000 Sobic006G204600 Sobic006G204600 Sobic001G410700--Sobic006G204600 Sobic001G410700--Sobic001G536901 Sobic010G009466 Sobic010G009466 Sobic001G410700--Sobic010G009466 Sobic001G410700--Sobic004G342500 Sobic001G001300 Sobic001G001300 Sobic001G410700--Sobic001G001300 Sobic003G160800 Sobic003G160800 Sobic001G410700--Sobic003G160800 Sobic009G121000 Sobic009G121000 Sobic001G410700--Sobic009G121000 Sobic007G189600 Sobic007G189600 Sobic009G137300--Sobic007G189600 Sobic009G137300--Sobic001G536901 Sobic003G256700 Sobic003G256700 Sobic009G137300--Sobic003G256700 Sobic009G137300--Sobic010G162500 Sobic002G324500 Sobic002G324500 Sobic009G137300--Sobic002G324500 Sobic009G137300--Sobic001G252401 Sobic008G047100 Sobic008G047100 Sobic009G137300--Sobic008G047100 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic006G063900 Sobic006G063900 Sobic003G403800--Sobic006G063900 Sobic003G403800--Sobic001G252401 Sobic003G403800--Sobic010G201600 Sobic001G167900 Sobic001G167900 Sobic003G403800--Sobic001G167900 Sobic003G050000 Sobic003G050000 Sobic003G403800--Sobic003G050000 Sobic002G061900 Sobic002G061900 Sobic003G403800--Sobic002G061900 Sobic004G359600 Sobic004G359600 Sobic003G403800--Sobic004G359600 Sobic004G124400 Sobic004G124400 Sobic003G403800--Sobic004G124400 Sobic001G176700 Sobic001G176700 Sobic003G403800--Sobic001G176700 Sobic005G100300 Sobic005G100300 Sobic010G201600--Sobic005G100300 Sobic002G405100 Sobic002G405100 Sobic010G201600--Sobic002G405100 Sobic001G128600 Sobic001G128600 Sobic010G201600--Sobic001G128600 Sobic002G133900 Sobic002G133900 Sobic010G201600--Sobic002G133900 Sobic002G233700 Sobic002G233700 Sobic010G201600--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic010G201600--Sobic002G401800 Sobic004G303200 Sobic004G303200 Sobic010G201600--Sobic004G303200 Sobic007G052400 Sobic007G052400 Sobic010G201600--Sobic007G052400 Sobic003G094350 Sobic003G094350 Sobic010G201600--Sobic003G094350 Sobic004G342500--Sobic006G204600 Sobic010G279100 Sobic010G279100 Sobic004G342500--Sobic010G279100 Sobic004G342500--Sobic002G199000 Sobic004G342500--Sobic001G410700 Sobic004G235100 Sobic004G235100 Sobic004G342500--Sobic004G235100 Sobic003G214800 Sobic003G214800 Sobic004G342500--Sobic003G214800 Sobic001G455500 Sobic001G455500 Sobic004G342500--Sobic001G455500 Sobic006G049200 Sobic006G049200 Sobic004G342500--Sobic006G049200 Sobic004G342500--Sobic006G122500 Sobic002G220900 Sobic002G220900 Sobic003G318300--Sobic002G220900 Sobic007G009200 Sobic007G009200 Sobic003G318300--Sobic007G009200 Sobic003G398800 Sobic003G398800 Sobic003G318300--Sobic003G398800 Sobic010G214100 Sobic010G214100 Sobic003G318300--Sobic010G214100 Sobic003G024300 Sobic003G024300 Sobic003G318300--Sobic003G024300 Sobic006G077400 Sobic006G077400 Sobic003G318300--Sobic006G077400 Sobic010G035400 Sobic010G035400 Sobic003G318300--Sobic010G035400 Sobic007G225500 Sobic007G225500 Sobic003G318300--Sobic007G225500 Sobic003G318300--Sobic002G324500 Sobic006G162200 Sobic006G162200 Sobic001G093500--Sobic006G162200 Sobic005G165500 Sobic005G165500 Sobic001G093500--Sobic005G165500 Sobic001G093500--Sobic005G039600 Sobic008G065000 Sobic008G065000 Sobic001G093500--Sobic008G065000 Sobic001G093500--Sobic001G536901 Sobic006G272900 Sobic006G272900 Sobic001G093500--Sobic006G272900 Sobic007G034300 Sobic007G034300 Sobic001G093500--Sobic007G034300 Sobic004G305800 Sobic004G305800 Sobic001G093500--Sobic004G305800 Sobic010G201700 Sobic010G201700 Sobic001G093500--Sobic010G201700 Sobic010G039500 Sobic010G039500 Sobic005G101300--Sobic010G039500 Sobic003G367500 Sobic003G367500 Sobic005G101300--Sobic003G367500 Sobic005G101300--Sobic003G024300 Sobic005G101300--Sobic007G009200 Sobic005G101300--Sobic003G398800 Sobic001G329400 Sobic001G329400 Sobic005G101300--Sobic001G329400 Sobic004G356400 Sobic004G356400 Sobic005G101300--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic005G101300--Sobic001G134100 Sobic007G105500 Sobic007G105500 Sobic005G101300--Sobic007G105500
Octagon: transcription factors


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