Gene annotation
Transcriptome id Sobic.009G137300.1
Synonym
Functional annotation -
UniProt A0A1B6P8D2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G189600 - -
2 Sobic.001G536901 - -
3 Sobic.003G256700 expressed protein -
4 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
6 Sobic.001G252401 - -
7 Sobic.008G047100 tetratricopeptide-like helical, putative, expressed -
8 Sobic.005G101300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
9 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
10 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
11 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
12 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
13 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
14 Sobic.001G176700 CBS domain containing protein, expressed -
15 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
16 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
17 Sobic.002G220900 expressed protein -
18 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
19 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
20 Sobic.006G093100 ferric-chelate reductase, putative, expressed -


Gene co-expression network
sample Sobic009G137300 Sobic009G137300 Sobic007G189600 Sobic007G189600 Sobic009G137300--Sobic007G189600 Sobic001G536901 Sobic001G536901 Sobic009G137300--Sobic001G536901 Sobic003G256700 Sobic003G256700 Sobic009G137300--Sobic003G256700 Sobic010G162500 Sobic010G162500 Sobic009G137300--Sobic010G162500 Sobic002G324500 Sobic002G324500 Sobic009G137300--Sobic002G324500 Sobic001G252401 Sobic001G252401 Sobic009G137300--Sobic001G252401 Sobic008G047100 Sobic008G047100 Sobic009G137300--Sobic008G047100 Sobic005G101300 Sobic005G101300 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic007G189600--Sobic003G256700 Sobic003G266500 Sobic003G266500 Sobic007G189600--Sobic003G266500 Sobic008G026800 Sobic008G026800 Sobic007G189600--Sobic008G026800 Sobic006G244000 Sobic006G244000 Sobic007G189600--Sobic006G244000 Sobic007G189600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic007G189600--Sobic003G431900 Sobic006G093000 Sobic006G093000 Sobic007G189600--Sobic006G093000 Sobic007G189600--Sobic009G137300 Sobic007G189700 Sobic007G189700 Sobic007G189600--Sobic007G189700 Sobic001G536901--Sobic001G252401 Sobic001G410700 Sobic001G410700 Sobic001G536901--Sobic001G410700 Sobic001G536901--Sobic009G137300 Sobic003G403800 Sobic003G403800 Sobic001G536901--Sobic003G403800 Sobic010G201600 Sobic010G201600 Sobic001G536901--Sobic010G201600 Sobic004G342500 Sobic004G342500 Sobic001G536901--Sobic004G342500 Sobic003G318300 Sobic003G318300 Sobic001G536901--Sobic003G318300 Sobic001G093500 Sobic001G093500 Sobic001G536901--Sobic001G093500 Sobic001G536901--Sobic005G101300 Sobic003G256700--Sobic003G431900 Sobic003G256700--Sobic006G244000 Sobic003G256700--Sobic002G324500 Sobic004G125700 Sobic004G125700 Sobic003G256700--Sobic004G125700 Sobic009G104800 Sobic009G104800 Sobic003G256700--Sobic009G104800 Sobic008G053200 Sobic008G053200 Sobic003G256700--Sobic008G053200 Sobic002G036000 Sobic002G036000 Sobic003G256700--Sobic002G036000 Sobic001G329400 Sobic001G329400 Sobic003G256700--Sobic001G329400 Sobic003G234200 Sobic003G234200 Sobic003G256700--Sobic003G234200 Sobic010G006300 Sobic010G006300 Sobic010G162500--Sobic010G006300 Sobic007G028200 Sobic007G028200 Sobic010G162500--Sobic007G028200 Sobic001G176700 Sobic001G176700 Sobic010G162500--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic003G097701 Sobic003G097701 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic003G367500 Sobic003G367500 Sobic002G324500--Sobic003G367500 Sobic002G324500--Sobic003G234200 Sobic008G117000 Sobic008G117000 Sobic002G324500--Sobic008G117000 Sobic002G324500--Sobic003G431900 Sobic004G215800 Sobic004G215800 Sobic002G324500--Sobic004G215800 Sobic002G324500--Sobic003G256700 Sobic007G009200 Sobic007G009200 Sobic002G324500--Sobic007G009200 Sobic003G024300 Sobic003G024300 Sobic002G324500--Sobic003G024300 Sobic005G089600 Sobic005G089600 Sobic002G324500--Sobic005G089600 Sobic001G252401--Sobic010G006300 Sobic001G252401--Sobic001G536901 Sobic001G252401--Sobic003G403800 Sobic001G252401--Sobic003G285600 Sobic007G080780 Sobic007G080780 Sobic001G252401--Sobic007G080780 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic001G252401--Sobic005G101300 Sobic002G324700 Sobic002G324700 Sobic008G047100--Sobic002G324700 Sobic008G047100--Sobic009G137300 Sobic008G047100--Sobic007G028200 Sobic008G047100--Sobic010G162500 Sobic008G086700 Sobic008G086700 Sobic008G047100--Sobic008G086700 Sobic002G176300 Sobic002G176300 Sobic008G047100--Sobic002G176300 Sobic008G047100--Sobic001G176700 Sobic001G374400 Sobic001G374400 Sobic008G047100--Sobic001G374400 Sobic008G047100--Sobic001G536901 Sobic010G039500 Sobic010G039500 Sobic005G101300--Sobic010G039500 Sobic005G101300--Sobic003G367500 Sobic005G101300--Sobic003G024300 Sobic005G101300--Sobic007G009200 Sobic003G398800 Sobic003G398800 Sobic005G101300--Sobic003G398800 Sobic005G101300--Sobic001G329400 Sobic004G356400 Sobic004G356400 Sobic005G101300--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic005G101300--Sobic001G134100 Sobic007G105500 Sobic007G105500 Sobic005G101300--Sobic007G105500 Sobic001G520800 Sobic001G520800 Sobic005G039600--Sobic001G520800 Sobic007G034300 Sobic007G034300 Sobic005G039600--Sobic007G034300 Sobic003G199800 Sobic003G199800 Sobic005G039600--Sobic003G199800 Sobic003G310400 Sobic003G310400 Sobic005G039600--Sobic003G310400 Sobic003G231800 Sobic003G231800 Sobic005G039600--Sobic003G231800 Sobic005G039600--Sobic003G431900 Sobic009G244300 Sobic009G244300 Sobic005G039600--Sobic009G244300 Sobic004G035500 Sobic004G035500 Sobic005G039600--Sobic004G035500 Sobic005G030500 Sobic005G030500 Sobic005G039600--Sobic005G030500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.