Gene annotation
Transcriptome id Sobic.008G047100.1
Synonym Sb08g003980
Functional annotation tetratricopeptide-like helical, putative, expressed
UniProt C5YSA1
Pfam PF14432 PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF117
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15720 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os12g06650.1 : tetratricopeptide-like helical, putative, expressed
MaizeGDB (Corn) Zm00025a053989
Brachypodium KQJ92133 , KQK18417
Barley HORVU1Hr1G073180.7 , HORVU7Hr1G117120.1 , HORVU7Hr1G117120.3 , HORVU7Hr1G117120.2 , HORVU1Hr1G073180.12 , HORVU1Hr1G073180.11 , HORVU1Hr1G073180.4 , HORVU1Hr1G073180.5 , HORVU1Hr1G073180.6 , HORVU1Hr1G073180.1 , HORVU1Hr1G073180.2 , HORVU1Hr1G073180.8 , HORVU1Hr1G073180.9
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G324700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
2 Sobic.009G137300 - -
3 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
4 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.008G086700 CRAL/TRIO domain containing protein, expressed -
6 Sobic.002G176300 RING finger protein, putative, expressed -
7 Sobic.001G176700 CBS domain containing protein, expressed -
8 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
9 Sobic.001G536901 - -
10 Sobic.007G189600 - -
11 Sobic.006G207700 containing DUF163, putative, expressed K00783: 23S rRNA (pseudouridine1915-N3)-methyltransferase
12 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
13 Sobic.004G186800 - -
14 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
15 Sobic.008G193200 expressed protein -
16 Sobic.009G049000 - -
17 Sobic.001G048500 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
18 Sobic.003G097701 - -
19 Sobic.001G496200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.009G152800 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic008G047100 Sobic008G047100 Sobic002G324700 Sobic002G324700 Sobic008G047100--Sobic002G324700 Sobic009G137300 Sobic009G137300 Sobic008G047100--Sobic009G137300 Sobic007G028200 Sobic007G028200 Sobic008G047100--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic008G047100--Sobic010G162500 Sobic008G086700 Sobic008G086700 Sobic008G047100--Sobic008G086700 Sobic002G176300 Sobic002G176300 Sobic008G047100--Sobic002G176300 Sobic001G176700 Sobic001G176700 Sobic008G047100--Sobic001G176700 Sobic001G374400 Sobic001G374400 Sobic008G047100--Sobic001G374400 Sobic001G536901 Sobic001G536901 Sobic008G047100--Sobic001G536901 Sobic002G324700--Sobic001G374400 Sobic002G324700--Sobic008G047100 Sobic004G186800 Sobic004G186800 Sobic002G324700--Sobic004G186800 Sobic003G139700 Sobic003G139700 Sobic002G324700--Sobic003G139700 Sobic004G111200 Sobic004G111200 Sobic002G324700--Sobic004G111200 Sobic001G087800 Sobic001G087800 Sobic002G324700--Sobic001G087800 Sobic009G152800 Sobic009G152800 Sobic002G324700--Sobic009G152800 Sobic002G324700--Sobic001G176700 Sobic003G064901 Sobic003G064901 Sobic002G324700--Sobic003G064901 Sobic007G189600 Sobic007G189600 Sobic009G137300--Sobic007G189600 Sobic009G137300--Sobic001G536901 Sobic003G256700 Sobic003G256700 Sobic009G137300--Sobic003G256700 Sobic009G137300--Sobic010G162500 Sobic002G324500 Sobic002G324500 Sobic009G137300--Sobic002G324500 Sobic001G252401 Sobic001G252401 Sobic009G137300--Sobic001G252401 Sobic009G137300--Sobic008G047100 Sobic005G101300 Sobic005G101300 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic007G141300 Sobic007G141300 Sobic007G028200--Sobic007G141300 Sobic003G097701 Sobic003G097701 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic010G006300 Sobic010G006300 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162500--Sobic003G285600 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic006G048400 Sobic006G048400 Sobic008G086700--Sobic006G048400 Sobic008G086700--Sobic003G139700 Sobic009G210250 Sobic009G210250 Sobic008G086700--Sobic009G210250 Sobic002G009000 Sobic002G009000 Sobic008G086700--Sobic002G009000 Sobic008G132500 Sobic008G132500 Sobic008G086700--Sobic008G132500 Sobic001G250750 Sobic001G250750 Sobic008G086700--Sobic001G250750 Sobic006G072701 Sobic006G072701 Sobic008G086700--Sobic006G072701 Sobic008G086700--Sobic002G176300 Sobic010G136700 Sobic010G136700 Sobic008G086700--Sobic010G136700 Sobic007G085400 Sobic007G085400 Sobic002G176300--Sobic007G085400 Sobic001G420150 Sobic001G420150 Sobic002G176300--Sobic001G420150 Sobic001G093400 Sobic001G093400 Sobic002G176300--Sobic001G093400 Sobic007G116300 Sobic007G116300 Sobic002G176300--Sobic007G116300 Sobic004G276600 Sobic004G276600 Sobic002G176300--Sobic004G276600 Sobic002G176300--Sobic008G086700 Sobic004G134400 Sobic004G134400 Sobic002G176300--Sobic004G134400 Sobic004G274300 Sobic004G274300 Sobic002G176300--Sobic004G274300 Sobic001G255866 Sobic001G255866 Sobic002G176300--Sobic001G255866 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic001G176700--Sobic007G028200 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic008G193200 Sobic008G193200 Sobic001G374400--Sobic008G193200 Sobic001G374400--Sobic002G324700 Sobic001G374400--Sobic001G176700 Sobic001G374400--Sobic009G133800 Sobic001G298400 Sobic001G298400 Sobic001G374400--Sobic001G298400 Sobic002G085400 Sobic002G085400 Sobic001G374400--Sobic002G085400 Sobic009G049000 Sobic009G049000 Sobic001G374400--Sobic009G049000 Sobic001G374400--Sobic003G285600 Sobic001G374400--Sobic007G028200 Sobic001G536901--Sobic001G252401 Sobic001G410700 Sobic001G410700 Sobic001G536901--Sobic001G410700 Sobic001G536901--Sobic009G137300 Sobic003G403800 Sobic003G403800 Sobic001G536901--Sobic003G403800 Sobic010G201600 Sobic010G201600 Sobic001G536901--Sobic010G201600 Sobic004G342500 Sobic004G342500 Sobic001G536901--Sobic004G342500 Sobic003G318300 Sobic003G318300 Sobic001G536901--Sobic003G318300 Sobic001G093500 Sobic001G093500 Sobic001G536901--Sobic001G093500 Sobic001G536901--Sobic005G101300
Octagon: transcription factors


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