Gene annotation
Transcriptome id Sobic.001G496200.1
Synonym Sb01g046350, HSFA6B, AT-HSFA6B
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
heat stress transcription factor, putative, expressed
UniProt C5WWX9
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF201
NCBI CDD KOG0627; Heat shock transcription factor
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G22830 : heat shock transcription factor A6B
RAP-DB (Rice) LOC_Os03g06630.2 : heat stress transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a008110 , Zm00025a045167 , Zm00025a015267 , Zm00025a038009 , Zm00025a040051 , Zm00025a051078 , Zm00025a000764 , Zm00025a048930 , Zm00025a002613 , Zm00025a033648 , Zm00025a020360
Brachypodium KQJ94147 , KQK13249 , KQK05247 , KQK14978 , KQK14979 , KQK05248 , PNT68735 , KQJ96747 , KQK08811 , KQK18031 , KQK12714 , KQK18032 , KQJ99265 , KQK23525 , PNT72861 , PNT72862 , KQK13250 , PNT77358 , PNT67394 , KQJ96750 , KQJ96751 , PNT70844 , KQJ99684 , PNT74158 , PNT74157 , PNT74156 , PNT74155 , KQK21569 , PNT72425 , KQK09735 , KQK23526
Barley HORVU1Hr1G083420.8 , HORVU1Hr1G083420.9 , HORVU1Hr1G083420.4 , HORVU1Hr1G083420.5 , HORVU1Hr1G083420.6 , HORVU1Hr1G083420.7 , HORVU1Hr1G083420.1 , HORVU1Hr1G083420.2 , HORVU1Hr1G083420.3 , HORVU1Hr1G083420.14 , HORVU1Hr1G083420.15 , HORVU1Hr1G083420.12 , HORVU1Hr1G083420.13 , HORVU1Hr1G083420.10 , HORVU1Hr1G083420.11 , HORVU2Hr1G026020.1 , HORVU1Hr1G081300.5 , HORVU3Hr1G071550.3 , HORVU3Hr1G071550.2 , HORVU3Hr1G071550.1 , HORVU1Hr1G081300.4 , HORVU1Hr1G081300.3 , HORVU1Hr1G081300.2 , HORVU3Hr1G071550.5 , HORVU3Hr1G071550.4 , HORVU1Hr1G081300.1 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU3Hr1G088890.2 , HORVU3Hr1G088890.1 , HORVU4Hr1G073650.5 , HORVU4Hr1G073650.4 , HORVU4Hr1G073650.7 , HORVU4Hr1G073650.6 , HORVU4Hr1G073650.1 , HORVU4Hr1G073650.3 , HORVU4Hr1G073650.2 , HORVU3Hr1G055960.4 , HORVU3Hr1G055960.5 , HORVU3Hr1G055960.1 , HORVU3Hr1G055960.2 , HORVU3Hr1G055960.3 , HORVU5Hr1G105770.4 , HORVU5Hr1G105770.1 , HORVU5Hr1G105770.3 , HORVU5Hr1G105770.2 , HORVU3Hr1G069590.2 , HORVU3Hr1G069590.3 , HORVU3Hr1G069590.1 , HORVU3Hr1G069590.4
Wheat TraesCS3A02G393200 , TraesCS3A02G280800 , TraesCS5A02G383800 , TraesCS5D02G393200 , TraesCS3D02G386000 , TraesCS2D02G211400 , TraesCS2D02G211400 , TraesCS1A02G375600 , TraesCS3A02G289200 , TraesCS4B02G278100 , TraesCS1A02G375600 , TraesCS2D02G151200 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS2B02G171900 , TraesCS2B02G232000 , TraesCS2B02G232000 , TraesCS4D02G276500 , TraesCS4A02G027700 , TraesCS2A02G204500 , TraesCS2A02G204500 , TraesCS3A02G229000 , TraesCS3B02G255600 , TraesCS3D02G227200 , TraesCS3D02G280600 , TraesCS7B02G272500 , TraesCS3D02G385900 , TraesCS1D02G382900 , TraesCS2A02G146600 , TraesCS1B02G396000
Populus PNT39523


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G520800 expressed protein -
2 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
3 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
4 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
5 Sobic.003G199800 expressed protein -
6 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
7 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
8 Sobic.004G035601 - -
9 Sobic.007G189700 - -
10 Sobic.004G035700 - -
11 Sobic.008G104601 - -
12 Sobic.003G256700 expressed protein -
13 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
14 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.003G235500 expressed protein -
16 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
17 Sobic.010G183032 - -
18 Sobic.010G108401 - -
19 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
20 Sobic.010G260700 kelch motif family protein, expressed -


Gene co-expression network
sample Sobic001G496200 Sobic001G496200 Sobic001G520800 Sobic001G520800 Sobic001G496200--Sobic001G520800 Sobic005G039600 Sobic005G039600 Sobic001G496200--Sobic005G039600 Sobic009G191300 Sobic009G191300 Sobic001G496200--Sobic009G191300 Sobic008G038300 Sobic008G038300 Sobic001G496200--Sobic008G038300 Sobic003G199800 Sobic003G199800 Sobic001G496200--Sobic003G199800 Sobic003G431900 Sobic003G431900 Sobic001G496200--Sobic003G431900 Sobic002G040100 Sobic002G040100 Sobic001G496200--Sobic002G040100 Sobic004G035601 Sobic004G035601 Sobic001G496200--Sobic004G035601 Sobic007G189700 Sobic007G189700 Sobic001G496200--Sobic007G189700 Sobic007G034300 Sobic007G034300 Sobic001G520800--Sobic007G034300 Sobic001G520800--Sobic005G039600 Sobic001G520800--Sobic003G199800 Sobic008G104601 Sobic008G104601 Sobic001G520800--Sobic008G104601 Sobic003G231800 Sobic003G231800 Sobic001G520800--Sobic003G231800 Sobic002G233300 Sobic002G233300 Sobic001G520800--Sobic002G233300 Sobic009G244300 Sobic009G244300 Sobic001G520800--Sobic009G244300 Sobic001G520800--Sobic007G189700 Sobic001G520800--Sobic003G431900 Sobic005G039600--Sobic001G520800 Sobic005G039600--Sobic007G034300 Sobic005G039600--Sobic003G199800 Sobic003G310400 Sobic003G310400 Sobic005G039600--Sobic003G310400 Sobic005G039600--Sobic003G231800 Sobic005G039600--Sobic003G431900 Sobic005G039600--Sobic009G244300 Sobic004G035500 Sobic004G035500 Sobic005G039600--Sobic004G035500 Sobic005G030500 Sobic005G030500 Sobic005G039600--Sobic005G030500 Sobic009G191300--Sobic008G038300 Sobic003G209800 Sobic003G209800 Sobic009G191300--Sobic003G209800 Sobic009G191300--Sobic002G040100 Sobic003G052500 Sobic003G052500 Sobic009G191300--Sobic003G052500 Sobic009G191300--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic009G191300--Sobic003G359100 Sobic009G191300--Sobic003G199800 Sobic010G109500 Sobic010G109500 Sobic009G191300--Sobic010G109500 Sobic001G338700 Sobic001G338700 Sobic009G191300--Sobic001G338700 Sobic008G038300--Sobic002G040100 Sobic001G274600 Sobic001G274600 Sobic008G038300--Sobic001G274600 Sobic010G183032 Sobic010G183032 Sobic008G038300--Sobic010G183032 Sobic008G038300--Sobic003G209800 Sobic010G108401 Sobic010G108401 Sobic008G038300--Sobic010G108401 Sobic002G000500 Sobic002G000500 Sobic008G038300--Sobic002G000500 Sobic008G038300--Sobic009G191300 Sobic004G071800 Sobic004G071800 Sobic008G038300--Sobic004G071800 Sobic008G038300--Sobic003G199800 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic003G199800--Sobic009G191300 Sobic008G053200 Sobic008G053200 Sobic003G431900--Sobic008G053200 Sobic003G234200 Sobic003G234200 Sobic003G431900--Sobic003G234200 Sobic004G305800 Sobic004G305800 Sobic003G431900--Sobic004G305800 Sobic003G256700 Sobic003G256700 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic005G165500 Sobic005G165500 Sobic003G431900--Sobic005G165500 Sobic002G324500 Sobic002G324500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431900--Sobic004G272100 Sobic002G040100--Sobic002G000500 Sobic002G040100--Sobic008G038300 Sobic002G040100--Sobic003G199800 Sobic002G040100--Sobic010G276400 Sobic001G068400 Sobic001G068400 Sobic002G040100--Sobic001G068400 Sobic002G040100--Sobic010G109500 Sobic010G038500 Sobic010G038500 Sobic002G040100--Sobic010G038500 Sobic002G040100--Sobic010G183032 Sobic002G040100--Sobic003G209800 Sobic006G051300 Sobic006G051300 Sobic004G035601--Sobic006G051300 Sobic004G035601--Sobic003G199800 Sobic008G016250 Sobic008G016250 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G026700 Sobic004G026700 Sobic004G035601--Sobic004G026700 Sobic004G035601--Sobic002G000500 Sobic004G035601--Sobic010G183100 Sobic004G035601--Sobic002G040100 Sobic004G035601--Sobic008G038300 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic009G222200 Sobic009G222200 Sobic007G189700--Sobic009G222200 Sobic009G254600 Sobic009G254600 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000
Octagon: transcription factors


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