Gene annotation
Transcriptome id Sobic.001G252401.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7B9
Pfam -
Panther DB PTHR33781
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18810 : phytochrome kinase substrate-related
RAP-DB (Rice) LOC_Os10g26670.1 : expressed protein
MaizeGDB (Corn) Zm00025a017807 , Zm00025a006989
Brachypodium -
Barley HORVU1Hr1G048290.2 , HORVU1Hr1G048290.1 , HORVU4Hr1G079210.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G006300 homeobox domain containing protein, expressed -
2 Sobic.001G536901 - -
3 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
5 Sobic.007G080780 - -
6 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
7 Sobic.006G122500 methyltransferase domain containing protein, expressed -
8 Sobic.008G193200 expressed protein -
9 Sobic.005G101300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
10 Sobic.009G045600 pro-resilin precursor, putative, expressed -
11 Sobic.006G158700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
12 Sobic.001G176700 CBS domain containing protein, expressed -
13 Sobic.010G039500 genetic modifier, putative, expressed -
14 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
15 Sobic.003G203000 high light inducible protein, putative, expressed -
16 Sobic.010G201600 tic21, putative, expressed -
17 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
18 Sobic.009G137300 - -
19 Sobic.004G211600 psaB translation factor, putative, expressed -
20 Sobic.003G403900 "domain confirmed by Pfam database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein


Gene co-expression network
sample Sobic001G252401 Sobic001G252401 Sobic010G006300 Sobic010G006300 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic003G403800 Sobic003G403800 Sobic001G252401--Sobic003G403800 Sobic003G285600 Sobic003G285600 Sobic001G252401--Sobic003G285600 Sobic007G080780 Sobic007G080780 Sobic001G252401--Sobic007G080780 Sobic010G162500 Sobic010G162500 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic001G176700 Sobic001G176700 Sobic010G006300--Sobic001G176700 Sobic007G028200 Sobic007G028200 Sobic010G006300--Sobic007G028200 Sobic010G006300--Sobic003G403800 Sobic010G006300--Sobic006G122500 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic001G536901--Sobic001G252401 Sobic001G410700 Sobic001G410700 Sobic001G536901--Sobic001G410700 Sobic009G137300 Sobic009G137300 Sobic001G536901--Sobic009G137300 Sobic001G536901--Sobic003G403800 Sobic010G201600 Sobic010G201600 Sobic001G536901--Sobic010G201600 Sobic004G342500 Sobic004G342500 Sobic001G536901--Sobic004G342500 Sobic003G318300 Sobic003G318300 Sobic001G536901--Sobic003G318300 Sobic001G093500 Sobic001G093500 Sobic001G536901--Sobic001G093500 Sobic001G536901--Sobic005G101300 Sobic006G063900 Sobic006G063900 Sobic003G403800--Sobic006G063900 Sobic003G403800--Sobic001G252401 Sobic003G403800--Sobic010G201600 Sobic001G167900 Sobic001G167900 Sobic003G403800--Sobic001G167900 Sobic003G050000 Sobic003G050000 Sobic003G403800--Sobic003G050000 Sobic002G061900 Sobic002G061900 Sobic003G403800--Sobic002G061900 Sobic004G359600 Sobic004G359600 Sobic003G403800--Sobic004G359600 Sobic004G124400 Sobic004G124400 Sobic003G403800--Sobic004G124400 Sobic003G403800--Sobic001G176700 Sobic010G162200 Sobic010G162200 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic003G285600--Sobic003G097701 Sobic007G080780--Sobic001G252401 Sobic001G071200 Sobic001G071200 Sobic007G080780--Sobic001G071200 Sobic003G284800 Sobic003G284800 Sobic007G080780--Sobic003G284800 Sobic003G255900 Sobic003G255900 Sobic007G080780--Sobic003G255900 Sobic004G099700 Sobic004G099700 Sobic007G080780--Sobic004G099700 Sobic006G014900 Sobic006G014900 Sobic007G080780--Sobic006G014900 Sobic007G080780--Sobic010G006300 Sobic006G123500 Sobic006G123500 Sobic007G080780--Sobic006G123500 Sobic006G093000 Sobic006G093000 Sobic007G080780--Sobic006G093000 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic006G049200 Sobic006G049200 Sobic006G122500--Sobic006G049200 Sobic006G122500--Sobic001G252401 Sobic006G122500--Sobic010G006300 Sobic006G122500--Sobic010G162500 Sobic004G289300 Sobic004G289300 Sobic006G122500--Sobic004G289300 Sobic006G122500--Sobic004G342500 Sobic006G122500--Sobic003G285600 Sobic006G122500--Sobic003G403800 Sobic001G193800 Sobic001G193800 Sobic006G122500--Sobic001G193800 Sobic009G049000 Sobic009G049000 Sobic008G193200--Sobic009G049000 Sobic003G403900 Sobic003G403900 Sobic008G193200--Sobic003G403900 Sobic001G374400 Sobic001G374400 Sobic008G193200--Sobic001G374400 Sobic008G193200--Sobic001G252401 Sobic010G188300 Sobic010G188300 Sobic008G193200--Sobic010G188300 Sobic010G042400 Sobic010G042400 Sobic008G193200--Sobic010G042400 Sobic004G165700 Sobic004G165700 Sobic008G193200--Sobic004G165700 Sobic001G298400 Sobic001G298400 Sobic008G193200--Sobic001G298400 Sobic008G193200--Sobic010G006300 Sobic010G039500 Sobic010G039500 Sobic005G101300--Sobic010G039500 Sobic003G367500 Sobic003G367500 Sobic005G101300--Sobic003G367500 Sobic003G024300 Sobic003G024300 Sobic005G101300--Sobic003G024300 Sobic007G009200 Sobic007G009200 Sobic005G101300--Sobic007G009200 Sobic003G398800 Sobic003G398800 Sobic005G101300--Sobic003G398800 Sobic001G329400 Sobic001G329400 Sobic005G101300--Sobic001G329400 Sobic004G356400 Sobic004G356400 Sobic005G101300--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic005G101300--Sobic001G134100 Sobic007G105500 Sobic007G105500 Sobic005G101300--Sobic007G105500
Octagon: transcription factors


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