Gene annotation
Transcriptome id Sobic.005G057700.1
Synonym Sb05g004660
Functional annotation expressed protein
UniProt A0A1B6PQD8
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF116
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g07260.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G019490.13 , HORVU4Hr1G019490.12 , HORVU4Hr1G019490.11 , HORVU4Hr1G019490.10 , HORVU4Hr1G019490.17 , HORVU4Hr1G019490.16 , HORVU4Hr1G019490.15 , HORVU4Hr1G019490.14 , HORVU4Hr1G019490.19 , HORVU4Hr1G019490.18 , HORVU4Hr1G019490.3 , HORVU4Hr1G019490.2 , HORVU4Hr1G019490.1 , HORVU4Hr1G019490.7 , HORVU4Hr1G019490.6 , HORVU4Hr1G019490.5 , HORVU4Hr1G019490.4 , HORVU4Hr1G019490.9 , HORVU4Hr1G019490.8 , HORVU4Hr1G019490.31 , HORVU4Hr1G019490.30 , HORVU4Hr1G019490.33 , HORVU4Hr1G019490.32 , HORVU4Hr1G019490.28 , HORVU4Hr1G019490.29 , HORVU4Hr1G019490.22 , HORVU4Hr1G019490.23 , HORVU4Hr1G019490.20 , HORVU4Hr1G019490.21 , HORVU4Hr1G019490.26 , HORVU4Hr1G019490.27 , HORVU4Hr1G019490.24 , HORVU4Hr1G019490.25
Wheat TraesCS4D02G107000 , TraesCS3B02G007000 , TraesCS4B02G109600 , TraesCS4D02G106900 , TraesCS3A02G007200 , TraesCS3B02G011500 , TraesCS4A02G206000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G386500 LSM domain containing protein, expressed -
2 Sobic.003G080000 Ser/Thr protein kinase, putative, expressed -
3 Sobic.010G138800 phosphate transporter 1, putative, expressed -
4 Sobic.004G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G106900 expressed protein -
6 Sobic.009G018600 TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
8 Sobic.008G115700 MLA12, putative, expressed -
9 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
10 Sobic.006G049200 violaxanthin de-epoxidase, putative, expressed K09839: VDE, violaxanthin de-epoxidase
11 Sobic.004G107500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium channel KAT1, putative, expressed -
12 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
13 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
14 Sobic.003G208100 Mo25, putative, expressed -
15 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
16 Sobic.002G137850 - -
17 Sobic.010G019200 - -
18 Sobic.004G153900 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
19 Sobic.006G128500 osFTL6 FT-Like6 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
20 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -


Gene co-expression network
sample Sobic005G057700 Sobic005G057700 Sobic003G386500 Sobic003G386500 Sobic005G057700--Sobic003G386500 Sobic003G080000 Sobic003G080000 Sobic005G057700--Sobic003G080000 Sobic010G138800 Sobic010G138800 Sobic005G057700--Sobic010G138800 Sobic004G030200 Sobic004G030200 Sobic005G057700--Sobic004G030200 Sobic003G106900 Sobic003G106900 Sobic005G057700--Sobic003G106900 Sobic009G018600 Sobic009G018600 Sobic005G057700--Sobic009G018600 Sobic006G235400 Sobic006G235400 Sobic005G057700--Sobic006G235400 Sobic008G115700 Sobic008G115700 Sobic005G057700--Sobic008G115700 Sobic004G128900 Sobic004G128900 Sobic005G057700--Sobic004G128900 Sobic003G386500--Sobic005G057700 Sobic003G208100 Sobic003G208100 Sobic003G386500--Sobic003G208100 Sobic003G386500--Sobic003G080000 Sobic003G386500--Sobic009G018600 Sobic003G386500--Sobic008G115700 Sobic003G386500--Sobic010G138800 Sobic007G117900 Sobic007G117900 Sobic003G386500--Sobic007G117900 Sobic005G025001 Sobic005G025001 Sobic003G386500--Sobic005G025001 Sobic010G244200 Sobic010G244200 Sobic003G386500--Sobic010G244200 Sobic003G080000--Sobic005G057700 Sobic010G019200 Sobic010G019200 Sobic003G080000--Sobic010G019200 Sobic005G095680 Sobic005G095680 Sobic003G080000--Sobic005G095680 Sobic006G049200 Sobic006G049200 Sobic003G080000--Sobic006G049200 Sobic008G094150 Sobic008G094150 Sobic003G080000--Sobic008G094150 Sobic001G087800 Sobic001G087800 Sobic003G080000--Sobic001G087800 Sobic003G080000--Sobic008G115700 Sobic003G080000--Sobic003G386500 Sobic003G080000--Sobic010G138800 Sobic010G138800--Sobic006G235400 Sobic002G072500 Sobic002G072500 Sobic010G138800--Sobic002G072500 Sobic010G138800--Sobic004G128900 Sobic001G180200 Sobic001G180200 Sobic010G138800--Sobic001G180200 Sobic001G317800 Sobic001G317800 Sobic010G138800--Sobic001G317800 Sobic007G135800 Sobic007G135800 Sobic010G138800--Sobic007G135800 Sobic001G470300 Sobic001G470300 Sobic010G138800--Sobic001G470300 Sobic009G038701 Sobic009G038701 Sobic010G138800--Sobic009G038701 Sobic010G231300 Sobic010G231300 Sobic010G138800--Sobic010G231300 Sobic004G030200--Sobic005G057700 Sobic010G187000 Sobic010G187000 Sobic004G030200--Sobic010G187000 Sobic002G287400 Sobic002G287400 Sobic004G030200--Sobic002G287400 Sobic004G154466 Sobic004G154466 Sobic004G030200--Sobic004G154466 Sobic002G379750 Sobic002G379750 Sobic004G030200--Sobic002G379750 Sobic002G293500 Sobic002G293500 Sobic004G030200--Sobic002G293500 Sobic006G128500 Sobic006G128500 Sobic004G030200--Sobic006G128500 Sobic010G131700 Sobic010G131700 Sobic004G030200--Sobic010G131700 Sobic001G062300 Sobic001G062300 Sobic004G030200--Sobic001G062300 Sobic002G206600 Sobic002G206600 Sobic003G106900--Sobic002G206600 Sobic003G339200 Sobic003G339200 Sobic003G106900--Sobic003G339200 Sobic010G271800 Sobic010G271800 Sobic003G106900--Sobic010G271800 Sobic003G304300 Sobic003G304300 Sobic003G106900--Sobic003G304300 Sobic004G344600 Sobic004G344600 Sobic003G106900--Sobic004G344600 Sobic007G044201 Sobic007G044201 Sobic003G106900--Sobic007G044201 Sobic002G161400 Sobic002G161400 Sobic003G106900--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G106900--Sobic001G112900 Sobic010G104700 Sobic010G104700 Sobic003G106900--Sobic010G104700 Sobic002G109200 Sobic002G109200 Sobic009G018600--Sobic002G109200 Sobic009G018600--Sobic008G115700 Sobic007G090451 Sobic007G090451 Sobic009G018600--Sobic007G090451 Sobic003G340300 Sobic003G340300 Sobic009G018600--Sobic003G340300 Sobic010G208750 Sobic010G208750 Sobic009G018600--Sobic010G208750 Sobic005G073800 Sobic005G073800 Sobic009G018600--Sobic005G073800 Sobic008G012150 Sobic008G012150 Sobic009G018600--Sobic008G012150 Sobic008G012100 Sobic008G012100 Sobic009G018600--Sobic008G012100 Sobic009G246400 Sobic009G246400 Sobic009G018600--Sobic009G246400 Sobic006G235400--Sobic010G231300 Sobic001G077300 Sobic001G077300 Sobic006G235400--Sobic001G077300 Sobic006G235400--Sobic004G128900 Sobic003G341300 Sobic003G341300 Sobic006G235400--Sobic003G341300 Sobic003G409700 Sobic003G409700 Sobic006G235400--Sobic003G409700 Sobic008G129900 Sobic008G129900 Sobic006G235400--Sobic008G129900 Sobic006G161500 Sobic006G161500 Sobic006G235400--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic006G235400--Sobic003G380200 Sobic006G235400--Sobic001G180200 Sobic004G223400 Sobic004G223400 Sobic008G115700--Sobic004G223400 Sobic010G178000 Sobic010G178000 Sobic008G115700--Sobic010G178000 Sobic001G313000 Sobic001G313000 Sobic008G115700--Sobic001G313000 Sobic008G115700--Sobic009G018600 Sobic008G115700--Sobic004G344600 Sobic010G177800 Sobic010G177800 Sobic008G115700--Sobic010G177800 Sobic003G154400 Sobic003G154400 Sobic008G115700--Sobic003G154400 Sobic006G041000 Sobic006G041000 Sobic008G115700--Sobic006G041000 Sobic009G259100 Sobic009G259100 Sobic008G115700--Sobic009G259100 Sobic004G128900--Sobic002G161400 Sobic004G153900 Sobic004G153900 Sobic004G128900--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic004G128900--Sobic006G191500 Sobic004G128900--Sobic006G235400 Sobic004G128900--Sobic006G161500 Sobic004G128900--Sobic004G344600 Sobic004G128900--Sobic003G380200 Sobic001G331600 Sobic001G331600 Sobic004G128900--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic004G128900--Sobic001G485100
Octagon: transcription factors


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