Gene annotation
Transcriptome id Sobic.004G030200.2,Sobic.004G030200.1
Synonym Sb04g002640
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5RKM9 , A0A1Z5RKN5 , A0A109NDU5
Pfam -
Panther DB PTHR35511
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40450 : -
RAP-DB (Rice) LOC_Os02g03840.2 : expressed protein
MaizeGDB (Corn) Zm00025a018854
Brachypodium PNT65805 , PNT65804
Barley HORVU6Hr1G016750.11 , HORVU6Hr1G016750.10 , HORVU6Hr1G016750.9 , HORVU6Hr1G016750.8 , HORVU6Hr1G016750.7 , HORVU6Hr1G016750.6 , HORVU6Hr1G016750.5 , HORVU6Hr1G016750.4 , HORVU6Hr1G016750.3
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G057700 expressed protein -
2 Sobic.010G187000 - -
3 Sobic.002G287400 NIN, putative, expressed -
4 Sobic.004G154466 - -
5 Sobic.002G379750 - -
6 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
7 Sobic.006G128500 osFTL6 FT-Like6 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
9 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
10 Sobic.004G006800 expressed protein -
11 Sobic.002G005800 protein kinase domain containing protein, expressed -
12 Sobic.008G122100 - -
13 Sobic.003G080000 Ser/Thr protein kinase, putative, expressed -
14 Sobic.004G338000 PPCK(PubMedID : 19549309)@PEP carboxylase kinase(PubMedID : 20410319)@-(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@calcium-dependent protein kinase isoform AK1, putative, expressed -
15 Sobic.004G154532 - -
16 Sobic.001G459600 expressed protein -
17 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
18 Sobic.005G224800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.003G227501 - -
20 Sobic.007G044201 - -


Gene co-expression network
sample Sobic004G030200 Sobic004G030200 Sobic005G057700 Sobic005G057700 Sobic004G030200--Sobic005G057700 Sobic010G187000 Sobic010G187000 Sobic004G030200--Sobic010G187000 Sobic002G287400 Sobic002G287400 Sobic004G030200--Sobic002G287400 Sobic004G154466 Sobic004G154466 Sobic004G030200--Sobic004G154466 Sobic002G379750 Sobic002G379750 Sobic004G030200--Sobic002G379750 Sobic002G293500 Sobic002G293500 Sobic004G030200--Sobic002G293500 Sobic006G128500 Sobic006G128500 Sobic004G030200--Sobic006G128500 Sobic010G131700 Sobic010G131700 Sobic004G030200--Sobic010G131700 Sobic001G062300 Sobic001G062300 Sobic004G030200--Sobic001G062300 Sobic003G386500 Sobic003G386500 Sobic005G057700--Sobic003G386500 Sobic003G080000 Sobic003G080000 Sobic005G057700--Sobic003G080000 Sobic010G138800 Sobic010G138800 Sobic005G057700--Sobic010G138800 Sobic005G057700--Sobic004G030200 Sobic003G106900 Sobic003G106900 Sobic005G057700--Sobic003G106900 Sobic009G018600 Sobic009G018600 Sobic005G057700--Sobic009G018600 Sobic006G235400 Sobic006G235400 Sobic005G057700--Sobic006G235400 Sobic008G115700 Sobic008G115700 Sobic005G057700--Sobic008G115700 Sobic004G128900 Sobic004G128900 Sobic005G057700--Sobic004G128900 Sobic010G187000--Sobic004G030200 Sobic010G187000--Sobic005G057700 Sobic003G139366 Sobic003G139366 Sobic010G187000--Sobic003G139366 Sobic002G266100 Sobic002G266100 Sobic010G187000--Sobic002G266100 Sobic010G187000--Sobic004G154466 Sobic007G044201 Sobic007G044201 Sobic010G187000--Sobic007G044201 Sobic007G095300 Sobic007G095300 Sobic010G187000--Sobic007G095300 Sobic004G154532 Sobic004G154532 Sobic010G187000--Sobic004G154532 Sobic003G227501 Sobic003G227501 Sobic010G187000--Sobic003G227501 Sobic004G338000 Sobic004G338000 Sobic002G287400--Sobic004G338000 Sobic002G291800 Sobic002G291800 Sobic002G287400--Sobic002G291800 Sobic005G224800 Sobic005G224800 Sobic002G287400--Sobic005G224800 Sobic006G041000 Sobic006G041000 Sobic002G287400--Sobic006G041000 Sobic004G190100 Sobic004G190100 Sobic002G287400--Sobic004G190100 Sobic007G006200 Sobic007G006200 Sobic002G287400--Sobic007G006200 Sobic003G301500 Sobic003G301500 Sobic002G287400--Sobic003G301500 Sobic010G223200 Sobic010G223200 Sobic002G287400--Sobic010G223200 Sobic002G287400--Sobic008G115700 Sobic004G154466--Sobic004G154532 Sobic004G154466--Sobic003G227501 Sobic005G217000 Sobic005G217000 Sobic004G154466--Sobic005G217000 Sobic010G275700 Sobic010G275700 Sobic004G154466--Sobic010G275700 Sobic001G200000 Sobic001G200000 Sobic004G154466--Sobic001G200000 Sobic006G036700 Sobic006G036700 Sobic004G154466--Sobic006G036700 Sobic002G171101 Sobic002G171101 Sobic004G154466--Sobic002G171101 Sobic004G154466--Sobic002G293500 Sobic003G391200 Sobic003G391200 Sobic004G154466--Sobic003G391200 Sobic004G006800 Sobic004G006800 Sobic002G379750--Sobic004G006800 Sobic004G127800 Sobic004G127800 Sobic002G379750--Sobic004G127800 Sobic003G160100 Sobic003G160100 Sobic002G379750--Sobic003G160100 Sobic002G124600 Sobic002G124600 Sobic002G379750--Sobic002G124600 Sobic006G235300 Sobic006G235300 Sobic002G379750--Sobic006G235300 Sobic006G065100 Sobic006G065100 Sobic002G379750--Sobic006G065100 Sobic005G095000 Sobic005G095000 Sobic002G379750--Sobic005G095000 Sobic004G312600 Sobic004G312600 Sobic002G379750--Sobic004G312600 Sobic006G219600 Sobic006G219600 Sobic002G379750--Sobic006G219600 Sobic004G153900 Sobic004G153900 Sobic002G293500--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic002G293500--Sobic001G046000 Sobic002G161400 Sobic002G161400 Sobic002G293500--Sobic002G161400 Sobic001G331600 Sobic001G331600 Sobic002G293500--Sobic001G331600 Sobic002G293500--Sobic004G312600 Sobic002G293500--Sobic004G127800 Sobic007G227100 Sobic007G227100 Sobic002G293500--Sobic007G227100 Sobic002G293500--Sobic010G131700 Sobic001G485100 Sobic001G485100 Sobic002G293500--Sobic001G485100 Sobic010G019200 Sobic010G019200 Sobic006G128500--Sobic010G019200 Sobic004G107500 Sobic004G107500 Sobic006G128500--Sobic004G107500 Sobic002G198700 Sobic002G198700 Sobic006G128500--Sobic002G198700 Sobic006G128500--Sobic005G057700 Sobic008G005900 Sobic008G005900 Sobic006G128500--Sobic008G005900 Sobic001G184300 Sobic001G184300 Sobic006G128500--Sobic001G184300 Sobic002G326300 Sobic002G326300 Sobic006G128500--Sobic002G326300 Sobic006G128500--Sobic004G030200 Sobic001G174200 Sobic001G174200 Sobic006G128500--Sobic001G174200 Sobic010G131700--Sobic002G293500 Sobic010G131700--Sobic004G127800 Sobic010G131700--Sobic005G095000 Sobic008G038500 Sobic008G038500 Sobic010G131700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic010G131700--Sobic002G119100 Sobic006G090100 Sobic006G090100 Sobic010G131700--Sobic006G090100 Sobic001G359300 Sobic001G359300 Sobic010G131700--Sobic001G359300 Sobic010G131700--Sobic007G227100 Sobic009G194500 Sobic009G194500 Sobic010G131700--Sobic009G194500 Sobic006G257800 Sobic006G257800 Sobic001G062300--Sobic006G257800 Sobic004G189200 Sobic004G189200 Sobic001G062300--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic001G062300--Sobic006G275100 Sobic008G167600 Sobic008G167600 Sobic001G062300--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic001G062300--Sobic007G190000 Sobic004G211866 Sobic004G211866 Sobic001G062300--Sobic004G211866 Sobic001G062300--Sobic003G301500 Sobic010G272800 Sobic010G272800 Sobic001G062300--Sobic010G272800 Sobic002G383600 Sobic002G383600 Sobic001G062300--Sobic002G383600
Octagon: transcription factors


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