Gene annotation
Transcriptome id Sobic.002G005800.2,Sobic.002G005800.1,Sobic.002G005800.4
Synonym Sb02g000740
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6Q8M8
Pfam PF00564 PF07714
Panther DB PTHR23257 PTHR23257:SF444
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G79570 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os03g28300.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK21355 , KQK21356 , KQK21345
Barley HORVU5Hr1G097010.27 , HORVU5Hr1G097010.26 , HORVU5Hr1G097010.25 , HORVU5Hr1G097010.24 , HORVU5Hr1G097010.23 , HORVU5Hr1G097010.21 , HORVU5Hr1G097010.20 , HORVU5Hr1G097010.29 , HORVU5Hr1G097010.28 , HORVU5Hr1G097010.34 , HORVU5Hr1G097010.30 , HORVU5Hr1G097010.31 , HORVU5Hr1G097010.32 , HORVU5Hr1G097010.33 , HORVU5Hr1G097010.3 , HORVU5Hr1G097010.18 , HORVU5Hr1G097010.19 , HORVU5Hr1G097010.16 , HORVU5Hr1G097010.17 , HORVU5Hr1G097010.14 , HORVU5Hr1G097010.15 , HORVU5Hr1G097010.12 , HORVU5Hr1G097010.13 , HORVU5Hr1G097010.10 , HORVU5Hr1G097010.11 , HORVU5Hr1G097010.8 , HORVU5Hr1G097010.9 , HORVU5Hr1G097010.4 , HORVU5Hr1G097010.5 , HORVU5Hr1G097010.6 , HORVU5Hr1G097010.7 , HORVU5Hr1G097010.1 , HORVU5Hr1G097010.22
Wheat TraesCS5A02G398200 , TraesCS5D02G407700 , TraesCS5D02G407700 , TraesCS5D02G407700 , TraesCS5B02G403300 , TraesCS5B02G403300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G115050 - -
2 Sobic.005G075100 rp3 protein, putative, expressed -
3 Sobic.005G224800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
5 Sobic.006G133900 NIN, putative, expressed -
6 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
7 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
8 Sobic.004G181600 calmodulin binding protein, putative, expressed -
9 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
10 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
11 Sobic.008G081800 expressed protein -
12 Sobic.008G130100 protein kinase family protein, putative, expressed -
13 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.006G065600 expressed protein -
15 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
16 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
17 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
18 Sobic.009G161550 - -
19 Sobic.004G143475 - -
20 Sobic.001G517800 NIN, putative, expressed -


Gene co-expression network
sample Sobic002G005800 Sobic002G005800 Sobic002G115050 Sobic002G115050 Sobic002G005800--Sobic002G115050 Sobic005G075100 Sobic005G075100 Sobic002G005800--Sobic005G075100 Sobic005G224800 Sobic005G224800 Sobic002G005800--Sobic005G224800 Sobic007G106800 Sobic007G106800 Sobic002G005800--Sobic007G106800 Sobic006G133900 Sobic006G133900 Sobic002G005800--Sobic006G133900 Sobic002G124600 Sobic002G124600 Sobic002G005800--Sobic002G124600 Sobic002G345700 Sobic002G345700 Sobic002G005800--Sobic002G345700 Sobic004G181600 Sobic004G181600 Sobic002G005800--Sobic004G181600 Sobic007G167100 Sobic007G167100 Sobic002G005800--Sobic007G167100 Sobic002G115050--Sobic005G075100 Sobic010G141966 Sobic010G141966 Sobic002G115050--Sobic010G141966 Sobic005G093800 Sobic005G093800 Sobic002G115050--Sobic005G093800 Sobic008G166550 Sobic008G166550 Sobic002G115050--Sobic008G166550 Sobic002G097700 Sobic002G097700 Sobic002G115050--Sobic002G097700 Sobic002G115075 Sobic002G115075 Sobic002G115050--Sobic002G115075 Sobic004G038800 Sobic004G038800 Sobic002G115050--Sobic004G038800 Sobic002G115050--Sobic004G181600 Sobic003G127001 Sobic003G127001 Sobic002G115050--Sobic003G127001 Sobic005G075100--Sobic002G115050 Sobic005G075100--Sobic004G181600 Sobic002G173100 Sobic002G173100 Sobic005G075100--Sobic002G173100 Sobic005G075100--Sobic002G345700 Sobic003G190000 Sobic003G190000 Sobic005G075100--Sobic003G190000 Sobic005G075100--Sobic010G141966 Sobic005G075100--Sobic006G133900 Sobic006G219600 Sobic006G219600 Sobic005G075100--Sobic006G219600 Sobic009G097200 Sobic009G097200 Sobic005G075100--Sobic009G097200 Sobic006G259600 Sobic006G259600 Sobic005G224800--Sobic006G259600 Sobic001G359300 Sobic001G359300 Sobic005G224800--Sobic001G359300 Sobic002G382700 Sobic002G382700 Sobic005G224800--Sobic002G382700 Sobic006G090100 Sobic006G090100 Sobic005G224800--Sobic006G090100 Sobic010G131700 Sobic010G131700 Sobic005G224800--Sobic010G131700 Sobic001G333800 Sobic001G333800 Sobic005G224800--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic005G224800--Sobic001G207800 Sobic001G243200 Sobic001G243200 Sobic005G224800--Sobic001G243200 Sobic010G275700 Sobic010G275700 Sobic005G224800--Sobic010G275700 Sobic003G191700 Sobic003G191700 Sobic007G106800--Sobic003G191700 Sobic007G106800--Sobic006G133900 Sobic003G155100 Sobic003G155100 Sobic007G106800--Sobic003G155100 Sobic001G375100 Sobic001G375100 Sobic007G106800--Sobic001G375100 Sobic001G454500 Sobic001G454500 Sobic007G106800--Sobic001G454500 Sobic004G174200 Sobic004G174200 Sobic007G106800--Sobic004G174200 Sobic006G065600 Sobic006G065600 Sobic007G106800--Sobic006G065600 Sobic008G001200 Sobic008G001200 Sobic007G106800--Sobic008G001200 Sobic003G198800 Sobic003G198800 Sobic007G106800--Sobic003G198800 Sobic006G133900--Sobic004G181600 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic002G104100 Sobic002G104100 Sobic006G133900--Sobic002G104100 Sobic008G130100 Sobic008G130100 Sobic006G133900--Sobic008G130100 Sobic006G133900--Sobic006G065600 Sobic006G133900--Sobic003G191700 Sobic002G124600--Sobic006G219600 Sobic002G124600--Sobic003G155100 Sobic002G124600--Sobic001G375100 Sobic002G124600--Sobic006G133900 Sobic002G124600--Sobic008G001200 Sobic001G298900 Sobic001G298900 Sobic002G124600--Sobic001G298900 Sobic002G124600--Sobic008G130100 Sobic002G124600--Sobic004G174200 Sobic004G356700 Sobic004G356700 Sobic002G124600--Sobic004G356700 Sobic008G172300 Sobic008G172300 Sobic002G345700--Sobic008G172300 Sobic002G345700--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic002G345700--Sobic005G142800 Sobic001G396000 Sobic001G396000 Sobic002G345700--Sobic001G396000 Sobic002G198200 Sobic002G198200 Sobic002G345700--Sobic002G198200 Sobic004G026500 Sobic004G026500 Sobic002G345700--Sobic004G026500 Sobic001G124100 Sobic001G124100 Sobic002G345700--Sobic001G124100 Sobic002G345700--Sobic004G181600 Sobic007G111400 Sobic007G111400 Sobic002G345700--Sobic007G111400 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic004G181600--Sobic005G075100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic004G181600--Sobic006G219600 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic007G167100--Sobic006G065600 Sobic007G167100--Sobic004G181600 Sobic010G002700 Sobic010G002700 Sobic007G167100--Sobic010G002700 Sobic007G167100--Sobic006G133900 Sobic005G179300 Sobic005G179300 Sobic007G167100--Sobic005G179300 Sobic001G169900 Sobic001G169900 Sobic007G167100--Sobic001G169900 Sobic006G212800 Sobic006G212800 Sobic007G167100--Sobic006G212800 Sobic004G042200 Sobic004G042200 Sobic007G167100--Sobic004G042200 Sobic003G343500 Sobic003G343500 Sobic007G167100--Sobic003G343500
Octagon: transcription factors


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