Gene annotation
Transcriptome id Sobic.002G287400.3,Sobic.002G287400.1
Synonym Sb02g031970
Functional annotation NIN, putative, expressed
UniProt A0A1B6QDX7 , C5X7L5
Pfam PF00564 PF02042
Panther DB PTHR32002 PTHR32002:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G76350 : Plant regulator RWP-RK family protein
RAP-DB (Rice) LOC_Os09g37710.1,LOC_Os09g37710.2 : NIN, putative, expressed
MaizeGDB (Corn) Zm00025a047968 , Zm00025a014507
Brachypodium KQJ91358 , KQJ91359
Barley HORVU5Hr1G086970.19 , HORVU5Hr1G086970.18 , HORVU5Hr1G086970.15 , HORVU5Hr1G086970.14 , HORVU5Hr1G086970.17 , HORVU5Hr1G086970.16 , HORVU5Hr1G086970.11 , HORVU5Hr1G086970.10 , HORVU5Hr1G086970.13 , HORVU5Hr1G086970.12 , HORVU5Hr1G114920.8 , HORVU5Hr1G114920.9 , HORVU5Hr1G114920.6 , HORVU5Hr1G114920.4 , HORVU5Hr1G114920.5 , HORVU5Hr1G114920.2 , HORVU5Hr1G114920.1 , HORVU5Hr1G086970.9 , HORVU5Hr1G086970.5 , HORVU5Hr1G086970.4 , HORVU5Hr1G086970.6 , HORVU5Hr1G086970.20 , HORVU5Hr1G086970.21 , HORVU5Hr1G086970.22 , HORVU5Hr1G086970.23 , HORVU5Hr1G086970.24 , HORVU5Hr1G086970.25 , HORVU5Hr1G114920.14 , HORVU5Hr1G114920.15 , HORVU5Hr1G114920.16 , HORVU5Hr1G114920.17 , HORVU5Hr1G114920.10 , HORVU5Hr1G114920.11 , HORVU5Hr1G114920.12 , HORVU5Hr1G114920.13
Wheat TraesCS5B02G350900 , TraesCS5A02G349500 , TraesCS5D02G355900 , TraesCS5D02G355900 , TraesCS5D02G355900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G338000 PPCK(PubMedID : 19549309)@PEP carboxylase kinase(PubMedID : 20410319)@-(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@calcium-dependent protein kinase isoform AK1, putative, expressed -
2 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
3 Sobic.005G224800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
5 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
6 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.003G301500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
8 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
9 Sobic.008G115700 MLA12, putative, expressed -
10 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
11 Sobic.002G213400 expressed protein -
12 Sobic.004G047300 receptor-like protein kinase precursor, putative, expressed -
13 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G133700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.004G006800 expressed protein -
16 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
17 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.004G323400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed -
19 Sobic.004G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.005G002400 expressed protein -


Gene co-expression network
sample Sobic002G287400 Sobic002G287400 Sobic004G338000 Sobic004G338000 Sobic002G287400--Sobic004G338000 Sobic002G291800 Sobic002G291800 Sobic002G287400--Sobic002G291800 Sobic005G224800 Sobic005G224800 Sobic002G287400--Sobic005G224800 Sobic006G041000 Sobic006G041000 Sobic002G287400--Sobic006G041000 Sobic004G190100 Sobic004G190100 Sobic002G287400--Sobic004G190100 Sobic007G006200 Sobic007G006200 Sobic002G287400--Sobic007G006200 Sobic003G301500 Sobic003G301500 Sobic002G287400--Sobic003G301500 Sobic010G223200 Sobic010G223200 Sobic002G287400--Sobic010G223200 Sobic008G115700 Sobic008G115700 Sobic002G287400--Sobic008G115700 Sobic006G235300 Sobic006G235300 Sobic004G338000--Sobic006G235300 Sobic002G161400 Sobic002G161400 Sobic004G338000--Sobic002G161400 Sobic004G338000--Sobic007G006200 Sobic006G191500 Sobic006G191500 Sobic004G338000--Sobic006G191500 Sobic004G127800 Sobic004G127800 Sobic004G338000--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic004G338000--Sobic002G293500 Sobic010G131700 Sobic010G131700 Sobic004G338000--Sobic010G131700 Sobic002G119100 Sobic002G119100 Sobic004G338000--Sobic002G119100 Sobic005G095000 Sobic005G095000 Sobic004G338000--Sobic005G095000 Sobic002G291800--Sobic010G223200 Sobic008G167600 Sobic008G167600 Sobic002G291800--Sobic008G167600 Sobic003G162400 Sobic003G162400 Sobic002G291800--Sobic003G162400 Sobic002G291800--Sobic006G235300 Sobic003G440300 Sobic003G440300 Sobic002G291800--Sobic003G440300 Sobic002G291800--Sobic004G127800 Sobic002G291800--Sobic004G190100 Sobic002G275100 Sobic002G275100 Sobic002G291800--Sobic002G275100 Sobic001G112900 Sobic001G112900 Sobic002G291800--Sobic001G112900 Sobic006G259600 Sobic006G259600 Sobic005G224800--Sobic006G259600 Sobic001G359300 Sobic001G359300 Sobic005G224800--Sobic001G359300 Sobic002G382700 Sobic002G382700 Sobic005G224800--Sobic002G382700 Sobic006G090100 Sobic006G090100 Sobic005G224800--Sobic006G090100 Sobic005G224800--Sobic010G131700 Sobic001G333800 Sobic001G333800 Sobic005G224800--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic005G224800--Sobic001G207800 Sobic001G243200 Sobic001G243200 Sobic005G224800--Sobic001G243200 Sobic010G275700 Sobic010G275700 Sobic005G224800--Sobic010G275700 Sobic009G259100 Sobic009G259100 Sobic006G041000--Sobic009G259100 Sobic006G041000--Sobic004G190100 Sobic006G041000--Sobic001G112900 Sobic006G041000--Sobic003G440300 Sobic004G267700 Sobic004G267700 Sobic006G041000--Sobic004G267700 Sobic002G351200 Sobic002G351200 Sobic006G041000--Sobic002G351200 Sobic002G213400 Sobic002G213400 Sobic006G041000--Sobic002G213400 Sobic007G121300 Sobic007G121300 Sobic006G041000--Sobic007G121300 Sobic003G304300 Sobic003G304300 Sobic006G041000--Sobic003G304300 Sobic005G002400 Sobic005G002400 Sobic004G190100--Sobic005G002400 Sobic004G190100--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic004G190100--Sobic003G326000 Sobic008G002400 Sobic008G002400 Sobic004G190100--Sobic008G002400 Sobic004G190100--Sobic001G112900 Sobic010G271800 Sobic010G271800 Sobic004G190100--Sobic010G271800 Sobic004G190100--Sobic010G223200 Sobic004G190100--Sobic003G162400 Sobic006G154800 Sobic006G154800 Sobic004G190100--Sobic006G154800 Sobic007G006200--Sobic006G191500 Sobic007G006200--Sobic002G161400 Sobic007G006200--Sobic004G127800 Sobic007G006200--Sobic010G223200 Sobic007G006200--Sobic006G235300 Sobic003G380200 Sobic003G380200 Sobic007G006200--Sobic003G380200 Sobic007G006200--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic007G006200--Sobic001G077300 Sobic007G006200--Sobic002G119100 Sobic004G189200 Sobic004G189200 Sobic003G301500--Sobic004G189200 Sobic003G301500--Sobic008G167600 Sobic002G431500 Sobic002G431500 Sobic003G301500--Sobic002G431500 Sobic001G062300 Sobic001G062300 Sobic003G301500--Sobic001G062300 Sobic010G272800 Sobic010G272800 Sobic003G301500--Sobic010G272800 Sobic003G301500--Sobic010G223200 Sobic010G020800 Sobic010G020800 Sobic003G301500--Sobic010G020800 Sobic003G301500--Sobic002G291800 Sobic003G301500--Sobic007G006200 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic010G223200--Sobic002G291800 Sobic010G223200--Sobic007G006200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic004G223400 Sobic004G223400 Sobic008G115700--Sobic004G223400 Sobic010G178000 Sobic010G178000 Sobic008G115700--Sobic010G178000 Sobic001G313000 Sobic001G313000 Sobic008G115700--Sobic001G313000 Sobic009G018600 Sobic009G018600 Sobic008G115700--Sobic009G018600 Sobic004G344600 Sobic004G344600 Sobic008G115700--Sobic004G344600 Sobic010G177800 Sobic010G177800 Sobic008G115700--Sobic010G177800 Sobic003G154400 Sobic003G154400 Sobic008G115700--Sobic003G154400 Sobic008G115700--Sobic006G041000 Sobic008G115700--Sobic009G259100
Octagon: transcription factors


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