Gene annotation
Transcriptome id Sobic.007G046100.1
Synonym MPK4, Sb07g003810, ATMPK4
Functional annotation CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5YH06
Pfam PF00069
Panther DB PTHR24055 PTHR24055:SF224
NCBI CDD -
KEGG Orthology K04371; ERK, mitogen-activated protein kinase 1/3
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G01370 : MAP kinase 4
RAP-DB (Rice) LOC_Os08g06060.1 : CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a055161
Brachypodium KQJ95326
Barley HORVU1Hr1G049500.4 , HORVU1Hr1G049500.1 , HORVU1Hr1G049500.3 , HORVU1Hr1G049500.2 , HORVU7Hr1G070970.6 , HORVU7Hr1G070970.7 , HORVU7Hr1G070970.4 , HORVU7Hr1G070970.5 , HORVU7Hr1G070970.2 , HORVU7Hr1G070970.3 , HORVU7Hr1G070970.1 , HORVU7Hr1G070970.9
Wheat TraesCS1D02G192200 , TraesCS1A02G184500 , TraesCS7B02G201000 , TraesCS7A02G299300 , TraesCS7D02G295900 , TraesCS1B02G192600 , TraesCS1B02G192600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G221000 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
2 Sobic.006G177400 amine oxidase, putative, expressed -
3 Sobic.002G206600 class I glutamine amidotransferase, putative, expressed -
4 Sobic.007G116700 dehydrogenase, putative, expressed K18980: EO, 2-methylene-furan-3-one reductase
5 Sobic.004G227600 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
6 Sobic.001G207100 - -
7 Sobic.001G167100 Ca ATPase 2(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
8 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
9 Sobic.003G106900 expressed protein -
10 Sobic.008G164850 - -
11 Sobic.001G175500 transcription factor X1, putative, expressed -
12 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
13 Sobic.004G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G171001 - -
15 Sobic.002G370700 expressed protein -
16 Sobic.009G022600 - -
17 Sobic.006G153000 expressed protein -
18 Sobic.002G036300 expressed protein -
19 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
20 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic007G046100 Sobic007G046100 Sobic004G221000 Sobic004G221000 Sobic007G046100--Sobic004G221000 Sobic006G177400 Sobic006G177400 Sobic007G046100--Sobic006G177400 Sobic002G206600 Sobic002G206600 Sobic007G046100--Sobic002G206600 Sobic007G116700 Sobic007G116700 Sobic007G046100--Sobic007G116700 Sobic004G227600 Sobic004G227600 Sobic007G046100--Sobic004G227600 Sobic001G207100 Sobic001G207100 Sobic007G046100--Sobic001G207100 Sobic001G167100 Sobic001G167100 Sobic007G046100--Sobic001G167100 Sobic003G133700 Sobic003G133700 Sobic007G046100--Sobic003G133700 Sobic003G106900 Sobic003G106900 Sobic007G046100--Sobic003G106900 Sobic004G221000--Sobic007G046100 Sobic004G099800 Sobic004G099800 Sobic004G221000--Sobic004G099800 Sobic001G175500 Sobic001G175500 Sobic004G221000--Sobic001G175500 Sobic009G022800 Sobic009G022800 Sobic004G221000--Sobic009G022800 Sobic003G396200 Sobic003G396200 Sobic004G221000--Sobic003G396200 Sobic005G045000 Sobic005G045000 Sobic004G221000--Sobic005G045000 Sobic010G256700 Sobic010G256700 Sobic004G221000--Sobic010G256700 Sobic003G354300 Sobic003G354300 Sobic004G221000--Sobic003G354300 Sobic006G186500 Sobic006G186500 Sobic004G221000--Sobic006G186500 Sobic003G050000 Sobic003G050000 Sobic006G177400--Sobic003G050000 Sobic010G015500 Sobic010G015500 Sobic006G177400--Sobic010G015500 Sobic008G019400 Sobic008G019400 Sobic006G177400--Sobic008G019400 Sobic006G177400--Sobic002G206600 Sobic001G434000 Sobic001G434000 Sobic006G177400--Sobic001G434000 Sobic006G177400--Sobic003G106900 Sobic001G018000 Sobic001G018000 Sobic006G177400--Sobic001G018000 Sobic006G177400--Sobic007G046100 Sobic002G213400 Sobic002G213400 Sobic006G177400--Sobic002G213400 Sobic007G044201 Sobic007G044201 Sobic002G206600--Sobic007G044201 Sobic002G206600--Sobic003G106900 Sobic002G206600--Sobic006G177400 Sobic001G289000 Sobic001G289000 Sobic002G206600--Sobic001G289000 Sobic003G016700 Sobic003G016700 Sobic002G206600--Sobic003G016700 Sobic010G133500 Sobic010G133500 Sobic002G206600--Sobic010G133500 Sobic003G188900 Sobic003G188900 Sobic002G206600--Sobic003G188900 Sobic001G502300 Sobic001G502300 Sobic002G206600--Sobic001G502300 Sobic001G172050 Sobic001G172050 Sobic002G206600--Sobic001G172050 Sobic002G055000 Sobic002G055000 Sobic007G116700--Sobic002G055000 Sobic006G161200 Sobic006G161200 Sobic007G116700--Sobic006G161200 Sobic010G011500 Sobic010G011500 Sobic007G116700--Sobic010G011500 Sobic004G296750 Sobic004G296750 Sobic007G116700--Sobic004G296750 Sobic001G480900 Sobic001G480900 Sobic007G116700--Sobic001G480900 Sobic006G049633 Sobic006G049633 Sobic007G116700--Sobic006G049633 Sobic008G061900 Sobic008G061900 Sobic007G116700--Sobic008G061900 Sobic003G337900 Sobic003G337900 Sobic007G116700--Sobic003G337900 Sobic003G281000 Sobic003G281000 Sobic007G116700--Sobic003G281000 Sobic008G192900 Sobic008G192900 Sobic004G227600--Sobic008G192900 Sobic007G075600 Sobic007G075600 Sobic004G227600--Sobic007G075600 Sobic001G442000 Sobic001G442000 Sobic004G227600--Sobic001G442000 Sobic001G454600 Sobic001G454600 Sobic004G227600--Sobic001G454600 Sobic005G068000 Sobic005G068000 Sobic004G227600--Sobic005G068000 Sobic004G218400 Sobic004G218400 Sobic004G227600--Sobic004G218400 Sobic004G072201 Sobic004G072201 Sobic004G227600--Sobic004G072201 Sobic004G127600 Sobic004G127600 Sobic004G227600--Sobic004G127600 Sobic003G067600 Sobic003G067600 Sobic004G227600--Sobic003G067600 Sobic006G155400 Sobic006G155400 Sobic001G207100--Sobic006G155400 Sobic005G150250 Sobic005G150250 Sobic001G207100--Sobic005G150250 Sobic003G149700 Sobic003G149700 Sobic001G207100--Sobic003G149700 Sobic009G022600 Sobic009G022600 Sobic001G207100--Sobic009G022600 Sobic002G132201 Sobic002G132201 Sobic001G207100--Sobic002G132201 Sobic005G073300 Sobic005G073300 Sobic001G207100--Sobic005G073300 Sobic001G112300 Sobic001G112300 Sobic001G207100--Sobic001G112300 Sobic006G222200 Sobic006G222200 Sobic001G207100--Sobic006G222200 Sobic003G193900 Sobic003G193900 Sobic001G207100--Sobic003G193900 Sobic008G052600 Sobic008G052600 Sobic001G167100--Sobic008G052600 Sobic003G336200 Sobic003G336200 Sobic001G167100--Sobic003G336200 Sobic004G177500 Sobic004G177500 Sobic001G167100--Sobic004G177500 Sobic003G249400 Sobic003G249400 Sobic001G167100--Sobic003G249400 Sobic008G177900 Sobic008G177900 Sobic001G167100--Sobic008G177900 Sobic001G284100 Sobic001G284100 Sobic001G167100--Sobic001G284100 Sobic009G041400 Sobic009G041400 Sobic001G167100--Sobic009G041400 Sobic009G202900 Sobic009G202900 Sobic001G167100--Sobic009G202900 Sobic001G167100--Sobic007G046100 Sobic003G050800 Sobic003G050800 Sobic003G133700--Sobic003G050800 Sobic006G074500 Sobic006G074500 Sobic003G133700--Sobic006G074500 Sobic006G101600 Sobic006G101600 Sobic003G133700--Sobic006G101600 Sobic004G224000 Sobic004G224000 Sobic003G133700--Sobic004G224000 Sobic002G430100 Sobic002G430100 Sobic003G133700--Sobic002G430100 Sobic010G249600 Sobic010G249600 Sobic003G133700--Sobic010G249600 Sobic007G077466 Sobic007G077466 Sobic003G133700--Sobic007G077466 Sobic001G184300 Sobic001G184300 Sobic003G133700--Sobic001G184300 Sobic009G213900 Sobic009G213900 Sobic003G133700--Sobic009G213900 Sobic003G106900--Sobic002G206600 Sobic003G339200 Sobic003G339200 Sobic003G106900--Sobic003G339200 Sobic010G271800 Sobic010G271800 Sobic003G106900--Sobic010G271800 Sobic003G304300 Sobic003G304300 Sobic003G106900--Sobic003G304300 Sobic004G344600 Sobic004G344600 Sobic003G106900--Sobic004G344600 Sobic003G106900--Sobic007G044201 Sobic002G161400 Sobic002G161400 Sobic003G106900--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G106900--Sobic001G112900 Sobic010G104700 Sobic010G104700 Sobic003G106900--Sobic010G104700
Octagon: transcription factors


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