Gene annotation
Transcriptome id Sobic.001G167100.2
Synonym Sb01g014620, ACA2
Functional annotation Ca ATPase 2 (PubMedID : 22196357)
calcium-transporting ATPase, plasma membrane-type, putative, expressed
UniProt C5WSB3 , C6JSB2 , C6JSL6 , C6JS61 , C6JSC2
Pfam PF00690 PF12710 PF00689 PF00122
Panther DB PTHR24093 PTHR24093:SF287
NCBI CDD -
KEGG Orthology K01537; P-type Ca2+ transporter type 2C
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT4G37640 : calcium ATPase 2
RAP-DB (Rice) LOC_Os03g42020.1 : calcium-transporting ATPase, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a001148 , Zm00025a004481 , Zm00025a007407
Brachypodium KQK14185 , KQK14184 , KQK14187 , KQK14186 , KQK14183 , KQK14182 , KQK14188 , KQJ86075 , PNT74439
Barley HORVU1Hr1G067550.21 , HORVU1Hr1G067550.20 , HORVU1Hr1G067550.10 , HORVU4Hr1G013660.29 , HORVU4Hr1G013660.28 , HORVU4Hr1G013660.25 , HORVU4Hr1G013660.24 , HORVU4Hr1G013660.27 , HORVU4Hr1G013660.26 , HORVU4Hr1G013660.21 , HORVU4Hr1G013660.20 , HORVU4Hr1G013660.23 , HORVU4Hr1G013660.22 , HORVU4Hr1G013660.8 , HORVU4Hr1G013660.2 , HORVU4Hr1G013660.3 , HORVU4Hr1G013660.1 , HORVU4Hr1G013660.6 , HORVU4Hr1G013660.7 , HORVU4Hr1G013660.4 , HORVU4Hr1G013660.5 , HORVU5Hr1G018160.5 , HORVU5Hr1G018160.4 , HORVU5Hr1G018160.7 , HORVU5Hr1G018160.6 , HORVU5Hr1G018160.1 , HORVU5Hr1G018160.3 , HORVU5Hr1G018160.2 , HORVU1Hr1G067550.6 , HORVU1Hr1G067550.7 , HORVU1Hr1G067550.4 , HORVU1Hr1G067550.5 , HORVU1Hr1G067550.2 , HORVU1Hr1G067550.3 , HORVU1Hr1G067550.1 , HORVU1Hr1G067550.8 , HORVU1Hr1G067550.9 , HORVU1Hr1G067550.18 , HORVU1Hr1G067550.19 , HORVU1Hr1G067550.14 , HORVU1Hr1G067550.15 , HORVU1Hr1G067550.16 , HORVU1Hr1G067550.17 , HORVU1Hr1G067550.11 , HORVU1Hr1G067550.12 , HORVU1Hr1G067550.13 , HORVU4Hr1G013660.19 , HORVU4Hr1G013660.10 , HORVU4Hr1G013660.11 , HORVU4Hr1G013660.12 , HORVU4Hr1G013660.13 , HORVU4Hr1G013660.16
Wheat TraesCS1B02G324000 , TraesCS1D02G312500 , TraesCS4D02G079200 , TraesCS4B02G080300 , TraesCS4B02G080300 , TraesCS5D02G080700 , TraesCS5D02G080700 , TraesCS4A02G234700 , TraesCS4A02G234700 , TraesCS1D02G312500 , TraesCS5A02G068700 , TraesCS5A02G068700
Populus -


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cDNA sequences
Sobic.001G167100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G052600 OsWAK32 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.003G336200 expressed protein -
3 Sobic.004G177500 expressed protein -
4 Sobic.003G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G177900 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.001G284100 RCD1, putative, expressed -
7 Sobic.009G041400 rp1, putative, expressed -
8 Sobic.009G202900 Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
9 Sobic.007G046100 CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
11 Sobic.001G168000 OsFBD13 - F-box and FBD domain containing protein, expressed -
12 Sobic.001G184300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
13 Sobic.009G143900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -
14 Sobic.001G173400 Regulator of chromosome condensation domain containing protein, expressed -
15 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
16 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
17 Sobic.003G359500 expressed protein -
18 Sobic.001G090200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed -
19 Sobic.010G055600 ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
20 Sobic.005G182400 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G167100 Sobic001G167100 Sobic008G052600 Sobic008G052600 Sobic001G167100--Sobic008G052600 Sobic003G336200 Sobic003G336200 Sobic001G167100--Sobic003G336200 Sobic004G177500 Sobic004G177500 Sobic001G167100--Sobic004G177500 Sobic003G249400 Sobic003G249400 Sobic001G167100--Sobic003G249400 Sobic008G177900 Sobic008G177900 Sobic001G167100--Sobic008G177900 Sobic001G284100 Sobic001G284100 Sobic001G167100--Sobic001G284100 Sobic009G041400 Sobic009G041400 Sobic001G167100--Sobic009G041400 Sobic009G202900 Sobic009G202900 Sobic001G167100--Sobic009G202900 Sobic007G046100 Sobic007G046100 Sobic001G167100--Sobic007G046100 Sobic008G052600--Sobic001G167100 Sobic005G143200 Sobic005G143200 Sobic008G052600--Sobic005G143200 Sobic003G403900 Sobic003G403900 Sobic008G052600--Sobic003G403900 Sobic005G093800 Sobic005G093800 Sobic008G052600--Sobic005G093800 Sobic004G165700 Sobic004G165700 Sobic008G052600--Sobic004G165700 Sobic003G190100 Sobic003G190100 Sobic008G052600--Sobic003G190100 Sobic006G243800 Sobic006G243800 Sobic008G052600--Sobic006G243800 Sobic003G160100 Sobic003G160100 Sobic008G052600--Sobic003G160100 Sobic005G182400 Sobic005G182400 Sobic008G052600--Sobic005G182400 Sobic010G244600 Sobic010G244600 Sobic003G336200--Sobic010G244600 Sobic004G072000 Sobic004G072000 Sobic003G336200--Sobic004G072000 Sobic001G543500 Sobic001G543500 Sobic003G336200--Sobic001G543500 Sobic002G088200 Sobic002G088200 Sobic003G336200--Sobic002G088200 Sobic003G107100 Sobic003G107100 Sobic003G336200--Sobic003G107100 Sobic009G255300 Sobic009G255300 Sobic003G336200--Sobic009G255300 Sobic005G169800 Sobic005G169800 Sobic003G336200--Sobic005G169800 Sobic004G034500 Sobic004G034500 Sobic003G336200--Sobic004G034500 Sobic007G204400 Sobic007G204400 Sobic003G336200--Sobic007G204400 Sobic002G320700 Sobic002G320700 Sobic004G177500--Sobic002G320700 Sobic002G118400 Sobic002G118400 Sobic004G177500--Sobic002G118400 Sobic007G174200 Sobic007G174200 Sobic004G177500--Sobic007G174200 Sobic001G061000 Sobic001G061000 Sobic004G177500--Sobic001G061000 Sobic002G227100 Sobic002G227100 Sobic004G177500--Sobic002G227100 Sobic007G200300 Sobic007G200300 Sobic004G177500--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic004G177500--Sobic002G280001 Sobic006G170800 Sobic006G170800 Sobic004G177500--Sobic006G170800 Sobic004G203600 Sobic004G203600 Sobic004G177500--Sobic004G203600 Sobic003G249400--Sobic004G177500 Sobic001G483200 Sobic001G483200 Sobic003G249400--Sobic001G483200 Sobic002G373200 Sobic002G373200 Sobic003G249400--Sobic002G373200 Sobic002G314950 Sobic002G314950 Sobic003G249400--Sobic002G314950 Sobic001G527900 Sobic001G527900 Sobic003G249400--Sobic001G527900 Sobic009G143900 Sobic009G143900 Sobic003G249400--Sobic009G143900 Sobic003G082401 Sobic003G082401 Sobic003G249400--Sobic003G082401 Sobic010G278300 Sobic010G278300 Sobic003G249400--Sobic010G278300 Sobic004G012100 Sobic004G012100 Sobic003G249400--Sobic004G012100 Sobic008G177900--Sobic004G177500 Sobic001G173400 Sobic001G173400 Sobic008G177900--Sobic001G173400 Sobic001G423000 Sobic001G423000 Sobic008G177900--Sobic001G423000 Sobic008G177900--Sobic001G061000 Sobic008G177900--Sobic002G118400 Sobic005G145700 Sobic005G145700 Sobic008G177900--Sobic005G145700 Sobic008G177900--Sobic009G202900 Sobic003G159400 Sobic003G159400 Sobic008G177900--Sobic003G159400 Sobic008G177900--Sobic002G320700 Sobic001G168000 Sobic001G168000 Sobic001G284100--Sobic001G168000 Sobic001G284100--Sobic009G255300 Sobic001G017900 Sobic001G017900 Sobic001G284100--Sobic001G017900 Sobic005G154900 Sobic005G154900 Sobic001G284100--Sobic005G154900 Sobic001G284100--Sobic003G336200 Sobic003G264700 Sobic003G264700 Sobic001G284100--Sobic003G264700 Sobic008G163700 Sobic008G163700 Sobic001G284100--Sobic008G163700 Sobic010G036000 Sobic010G036000 Sobic001G284100--Sobic010G036000 Sobic003G440400 Sobic003G440400 Sobic001G284100--Sobic003G440400 Sobic001G184300 Sobic001G184300 Sobic009G041400--Sobic001G184300 Sobic003G137200 Sobic003G137200 Sobic009G041400--Sobic003G137200 Sobic009G041400--Sobic003G249400 Sobic002G208301 Sobic002G208301 Sobic009G041400--Sobic002G208301 Sobic009G041400--Sobic004G177500 Sobic004G081000 Sobic004G081000 Sobic009G041400--Sobic004G081000 Sobic009G041400--Sobic002G280001 Sobic009G144050 Sobic009G144050 Sobic009G041400--Sobic009G144050 Sobic006G024400 Sobic006G024400 Sobic009G041400--Sobic006G024400 Sobic003G149900 Sobic003G149900 Sobic009G202900--Sobic003G149900 Sobic009G202900--Sobic002G373200 Sobic007G174100 Sobic007G174100 Sobic009G202900--Sobic007G174100 Sobic010G155901 Sobic010G155901 Sobic009G202900--Sobic010G155901 Sobic006G058300 Sobic006G058300 Sobic009G202900--Sobic006G058300 Sobic003G400332 Sobic003G400332 Sobic009G202900--Sobic003G400332 Sobic005G076100 Sobic005G076100 Sobic009G202900--Sobic005G076100 Sobic006G037000 Sobic006G037000 Sobic009G202900--Sobic006G037000 Sobic006G069050 Sobic006G069050 Sobic009G202900--Sobic006G069050 Sobic004G221000 Sobic004G221000 Sobic007G046100--Sobic004G221000 Sobic006G177400 Sobic006G177400 Sobic007G046100--Sobic006G177400 Sobic002G206600 Sobic002G206600 Sobic007G046100--Sobic002G206600 Sobic007G116700 Sobic007G116700 Sobic007G046100--Sobic007G116700 Sobic004G227600 Sobic004G227600 Sobic007G046100--Sobic004G227600 Sobic001G207100 Sobic001G207100 Sobic007G046100--Sobic001G207100 Sobic007G046100--Sobic001G167100 Sobic003G133700 Sobic003G133700 Sobic007G046100--Sobic003G133700 Sobic003G106900 Sobic003G106900 Sobic007G046100--Sobic003G106900
Octagon: transcription factors


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