Gene annotation
Transcriptome id Sobic.006G153000.2,Sobic.006G153000.1
Synonym Sb06g023050
Functional annotation expressed protein
UniProt C5YCG9
Pfam PF02620
Panther DB PTHR37734 PTHR37734:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19800 : Protein of unknown function (DUF177)
RAP-DB (Rice) LOC_Os04g44340.1 : expressed protein
MaizeGDB (Corn) Zm00025a010611
Brachypodium KQJ83672 , KQJ83673
Barley HORVU2Hr1G090400.1 , HORVU2Hr1G090400.3 , HORVU2Hr1G090400.2 , HORVU2Hr1G090400.5 , HORVU2Hr1G090400.7 , HORVU2Hr1G090400.6 , HORVU2Hr1G090400.9 , HORVU2Hr1G090400.8 , HORVU2Hr1G090400.15 , HORVU2Hr1G090400.14 , HORVU2Hr1G090400.17 , HORVU2Hr1G090400.11 , HORVU2Hr1G090400.10 , HORVU2Hr1G090400.12 , HORVU2Hr1G090400.18
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G108200 expressed protein -
2 Sobic.006G270200 smr domain containing protein, expressed K07456: DNA mismatch repair protein MutS2
3 Sobic.007G130400 FAD dependent oxidoreductase, putative, expressed -
4 Sobic.003G419900 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed K08903: photosystem II 13kDa protein
5 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
6 Sobic.002G406700 tyrosine-specific transport protein, putative, expressed K03834: tyrosine-specific transport protein
7 Sobic.003G408000 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
8 Sobic.003G275200 methyltransferase domain containing protein, expressed -
9 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
10 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
11 Sobic.001G005200 expressed protein -
12 Sobic.006G197300 expressed protein -
13 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
15 Sobic.001G423400 RNA polymerase sigma factor, putative, expressed -
16 Sobic.004G328400 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
17 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
18 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
19 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
20 Sobic.007G181400 TraB family protein, putative, expressed -


Gene co-expression network
sample Sobic006G153000 Sobic006G153000 Sobic006G108200 Sobic006G108200 Sobic006G153000--Sobic006G108200 Sobic006G270200 Sobic006G270200 Sobic006G153000--Sobic006G270200 Sobic007G130400 Sobic007G130400 Sobic006G153000--Sobic007G130400 Sobic003G419900 Sobic003G419900 Sobic006G153000--Sobic003G419900 Sobic004G359600 Sobic004G359600 Sobic006G153000--Sobic004G359600 Sobic002G406700 Sobic002G406700 Sobic006G153000--Sobic002G406700 Sobic003G408000 Sobic003G408000 Sobic006G153000--Sobic003G408000 Sobic003G275200 Sobic003G275200 Sobic006G153000--Sobic003G275200 Sobic004G239100 Sobic004G239100 Sobic006G153000--Sobic004G239100 Sobic006G108200--Sobic003G275200 Sobic002G351600 Sobic002G351600 Sobic006G108200--Sobic002G351600 Sobic004G055000 Sobic004G055000 Sobic006G108200--Sobic004G055000 Sobic004G028300 Sobic004G028300 Sobic006G108200--Sobic004G028300 Sobic004G154800 Sobic004G154800 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic001G220000 Sobic001G220000 Sobic006G108200--Sobic001G220000 Sobic001G167900 Sobic001G167900 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic001G028100 Sobic001G028100 Sobic006G270200--Sobic001G028100 Sobic003G352500 Sobic003G352500 Sobic006G270200--Sobic003G352500 Sobic001G054100 Sobic001G054100 Sobic006G270200--Sobic001G054100 Sobic008G039600 Sobic008G039600 Sobic006G270200--Sobic008G039600 Sobic002G181000 Sobic002G181000 Sobic006G270200--Sobic002G181000 Sobic010G002000 Sobic010G002000 Sobic006G270200--Sobic010G002000 Sobic006G270200--Sobic001G220000 Sobic003G094350 Sobic003G094350 Sobic006G270200--Sobic003G094350 Sobic003G232700 Sobic003G232700 Sobic006G270200--Sobic003G232700 Sobic007G130400--Sobic001G167900 Sobic006G063900 Sobic006G063900 Sobic007G130400--Sobic006G063900 Sobic007G130400--Sobic004G359600 Sobic003G058700 Sobic003G058700 Sobic007G130400--Sobic003G058700 Sobic007G130400--Sobic002G351600 Sobic007G130400--Sobic004G028300 Sobic004G124400 Sobic004G124400 Sobic007G130400--Sobic004G124400 Sobic007G130400--Sobic006G108200 Sobic007G225500 Sobic007G225500 Sobic007G130400--Sobic007G225500 Sobic007G181400 Sobic007G181400 Sobic003G419900--Sobic007G181400 Sobic004G353100 Sobic004G353100 Sobic003G419900--Sobic004G353100 Sobic003G419900--Sobic004G359600 Sobic004G202200 Sobic004G202200 Sobic003G419900--Sobic004G202200 Sobic002G233700 Sobic002G233700 Sobic003G419900--Sobic002G233700 Sobic006G140500 Sobic006G140500 Sobic003G419900--Sobic006G140500 Sobic003G419900--Sobic004G028300 Sobic001G289500 Sobic001G289500 Sobic003G419900--Sobic001G289500 Sobic001G015200 Sobic001G015200 Sobic003G419900--Sobic001G015200 Sobic007G173800 Sobic007G173800 Sobic004G359600--Sobic007G173800 Sobic004G359600--Sobic001G167900 Sobic008G102000 Sobic008G102000 Sobic004G359600--Sobic008G102000 Sobic004G359600--Sobic007G181400 Sobic003G378600 Sobic003G378600 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic001G005200 Sobic001G005200 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic009G140600 Sobic009G140600 Sobic004G359600--Sobic009G140600 Sobic004G336200 Sobic004G336200 Sobic002G406700--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic002G406700--Sobic008G073100 Sobic003G151500 Sobic003G151500 Sobic002G406700--Sobic003G151500 Sobic003G372900 Sobic003G372900 Sobic002G406700--Sobic003G372900 Sobic002G272100 Sobic002G272100 Sobic002G406700--Sobic002G272100 Sobic002G406700--Sobic003G094350 Sobic003G301300 Sobic003G301300 Sobic002G406700--Sobic003G301300 Sobic009G148500 Sobic009G148500 Sobic002G406700--Sobic009G148500 Sobic003G077400 Sobic003G077400 Sobic002G406700--Sobic003G077400 Sobic001G405700 Sobic001G405700 Sobic003G408000--Sobic001G405700 Sobic004G012900 Sobic004G012900 Sobic003G408000--Sobic004G012900 Sobic003G408000--Sobic003G419900 Sobic009G131800 Sobic009G131800 Sobic003G408000--Sobic009G131800 Sobic003G408000--Sobic008G039600 Sobic003G408000--Sobic003G077400 Sobic002G405100 Sobic002G405100 Sobic003G408000--Sobic002G405100 Sobic009G055800 Sobic009G055800 Sobic003G408000--Sobic009G055800 Sobic002G401800 Sobic002G401800 Sobic003G408000--Sobic002G401800 Sobic003G275200--Sobic004G055000 Sobic003G275200--Sobic006G108200 Sobic004G326500 Sobic004G326500 Sobic003G275200--Sobic004G326500 Sobic003G275200--Sobic004G154800 Sobic003G275200--Sobic008G172700 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic003G275200--Sobic008G039600 Sobic003G275200--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic004G239100--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic004G239100--Sobic009G183700 Sobic004G239100--Sobic008G172700 Sobic005G194100 Sobic005G194100 Sobic004G239100--Sobic005G194100 Sobic004G239100--Sobic003G378600 Sobic004G239100--Sobic008G102000 Sobic009G030900 Sobic009G030900 Sobic004G239100--Sobic009G030900 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600
Octagon: transcription factors


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