Gene annotation
Transcriptome id Sobic.002G206600.1
Synonym Sb02g025100
Functional annotation class I glutamine amidotransferase, putative, expressed
UniProt C5XCY5
Pfam PF00117
Panther DB PTHR11922 PTHR11922:SF42
NCBI CDD KOG3179; Predicted glutamine synthetase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30550 : Class I glutamine amidotransferase-like superfamily protein
RAP-DB (Rice) LOC_Os09g25610.1 : class I glutamine amidotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a013937 , Zm00025a017095
Brachypodium PNT66021 , KQJ90294
Barley HORVU4Hr1G004260.7 , HORVU4Hr1G004260.5 , HORVU4Hr1G004260.2 , HORVU4Hr1G004260.3 , HORVU4Hr1G004260.1 , HORVU6Hr1G029750.1 , HORVU6Hr1G029750.2
Wheat TraesCS6A02G149700 , TraesCS4A02G284400 , TraesCS4A02G284400 , TraesCS4D02G026300 , TraesCS6B02G177600 , TraesCS6D02G139000 , TraesCS4B02G028700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G044201 - -
2 Sobic.003G106900 expressed protein -
3 Sobic.006G177400 amine oxidase, putative, expressed -
4 Sobic.001G289000 - -
5 Sobic.003G016700 OsFBX380 - F-box domain containing protein, expressed -
6 Sobic.010G133500 AT hook motif domain containing protein, expressed -
7 Sobic.003G188900 expressed protein -
8 Sobic.001G502300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.001G172050 - -
10 Sobic.007G046100 CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.010G103000 expressed protein -
12 Sobic.001G112300 OsCam3 - Calmodulin, expressed K02183: calmodulin
13 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
14 Sobic.006G155400 expressed protein -
15 Sobic.007G069750 - -
16 Sobic.001G221750 - -
17 Sobic.005G150250 - -
18 Sobic.010G129900 expressed protein -
19 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G237400 expressed protein -


Gene co-expression network
sample Sobic002G206600 Sobic002G206600 Sobic007G044201 Sobic007G044201 Sobic002G206600--Sobic007G044201 Sobic003G106900 Sobic003G106900 Sobic002G206600--Sobic003G106900 Sobic006G177400 Sobic006G177400 Sobic002G206600--Sobic006G177400 Sobic001G289000 Sobic001G289000 Sobic002G206600--Sobic001G289000 Sobic003G016700 Sobic003G016700 Sobic002G206600--Sobic003G016700 Sobic010G133500 Sobic010G133500 Sobic002G206600--Sobic010G133500 Sobic003G188900 Sobic003G188900 Sobic002G206600--Sobic003G188900 Sobic001G502300 Sobic001G502300 Sobic002G206600--Sobic001G502300 Sobic001G172050 Sobic001G172050 Sobic002G206600--Sobic001G172050 Sobic007G044201--Sobic002G206600 Sobic007G044201--Sobic001G289000 Sobic007G044201--Sobic001G172050 Sobic007G044201--Sobic001G502300 Sobic007G044201--Sobic010G133500 Sobic007G044201--Sobic003G106900 Sobic007G044201--Sobic003G016700 Sobic006G262001 Sobic006G262001 Sobic007G044201--Sobic006G262001 Sobic002G302400 Sobic002G302400 Sobic007G044201--Sobic002G302400 Sobic003G106900--Sobic002G206600 Sobic003G339200 Sobic003G339200 Sobic003G106900--Sobic003G339200 Sobic010G271800 Sobic010G271800 Sobic003G106900--Sobic010G271800 Sobic003G304300 Sobic003G304300 Sobic003G106900--Sobic003G304300 Sobic004G344600 Sobic004G344600 Sobic003G106900--Sobic004G344600 Sobic003G106900--Sobic007G044201 Sobic002G161400 Sobic002G161400 Sobic003G106900--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G106900--Sobic001G112900 Sobic010G104700 Sobic010G104700 Sobic003G106900--Sobic010G104700 Sobic003G050000 Sobic003G050000 Sobic006G177400--Sobic003G050000 Sobic010G015500 Sobic010G015500 Sobic006G177400--Sobic010G015500 Sobic008G019400 Sobic008G019400 Sobic006G177400--Sobic008G019400 Sobic006G177400--Sobic002G206600 Sobic001G434000 Sobic001G434000 Sobic006G177400--Sobic001G434000 Sobic006G177400--Sobic003G106900 Sobic001G018000 Sobic001G018000 Sobic006G177400--Sobic001G018000 Sobic007G046100 Sobic007G046100 Sobic006G177400--Sobic007G046100 Sobic002G213400 Sobic002G213400 Sobic006G177400--Sobic002G213400 Sobic001G289000--Sobic007G044201 Sobic001G366200 Sobic001G366200 Sobic001G289000--Sobic001G366200 Sobic001G289000--Sobic010G271800 Sobic001G289000--Sobic002G206600 Sobic001G289000--Sobic001G172050 Sobic002G052100 Sobic002G052100 Sobic001G289000--Sobic002G052100 Sobic002G052000 Sobic002G052000 Sobic001G289000--Sobic002G052000 Sobic004G190100 Sobic004G190100 Sobic001G289000--Sobic004G190100 Sobic006G150800 Sobic006G150800 Sobic001G289000--Sobic006G150800 Sobic003G016700--Sobic007G044201 Sobic003G016700--Sobic002G206600 Sobic004G107500 Sobic004G107500 Sobic003G016700--Sobic004G107500 Sobic004G115950 Sobic004G115950 Sobic003G016700--Sobic004G115950 Sobic002G198700 Sobic002G198700 Sobic003G016700--Sobic002G198700 Sobic003G361000 Sobic003G361000 Sobic003G016700--Sobic003G361000 Sobic006G146150 Sobic006G146150 Sobic003G016700--Sobic006G146150 Sobic006G128500 Sobic006G128500 Sobic003G016700--Sobic006G128500 Sobic001G195866 Sobic001G195866 Sobic003G016700--Sobic001G195866 Sobic010G133500--Sobic007G044201 Sobic010G133500--Sobic001G502300 Sobic010G133500--Sobic001G172050 Sobic010G133500--Sobic002G206600 Sobic010G133500--Sobic003G106900 Sobic003G064600 Sobic003G064600 Sobic010G133500--Sobic003G064600 Sobic001G513000 Sobic001G513000 Sobic010G133500--Sobic001G513000 Sobic010G103000 Sobic010G103000 Sobic010G133500--Sobic010G103000 Sobic005G094001 Sobic005G094001 Sobic010G133500--Sobic005G094001 Sobic003G188900--Sobic010G103000 Sobic004G078400 Sobic004G078400 Sobic003G188900--Sobic004G078400 Sobic001G112300 Sobic001G112300 Sobic003G188900--Sobic001G112300 Sobic002G213050 Sobic002G213050 Sobic003G188900--Sobic002G213050 Sobic004G089600 Sobic004G089600 Sobic003G188900--Sobic004G089600 Sobic007G069750 Sobic007G069750 Sobic003G188900--Sobic007G069750 Sobic006G155400 Sobic006G155400 Sobic003G188900--Sobic006G155400 Sobic007G202000 Sobic007G202000 Sobic003G188900--Sobic007G202000 Sobic006G123600 Sobic006G123600 Sobic003G188900--Sobic006G123600 Sobic003G141550 Sobic003G141550 Sobic001G502300--Sobic003G141550 Sobic001G502300--Sobic002G302400 Sobic008G148700 Sobic008G148700 Sobic001G502300--Sobic008G148700 Sobic003G058400 Sobic003G058400 Sobic001G502300--Sobic003G058400 Sobic005G082950 Sobic005G082950 Sobic001G502300--Sobic005G082950 Sobic001G272300 Sobic001G272300 Sobic001G502300--Sobic001G272300 Sobic001G172050--Sobic007G044201 Sobic002G021900 Sobic002G021900 Sobic001G172050--Sobic002G021900 Sobic001G172050--Sobic003G106900 Sobic009G197800 Sobic009G197800 Sobic001G172050--Sobic009G197800 Sobic008G012150 Sobic008G012150 Sobic001G172050--Sobic008G012150 Sobic007G163433 Sobic007G163433 Sobic001G172050--Sobic007G163433 Sobic001G172050--Sobic002G052100 Sobic001G172050--Sobic010G271800 Sobic003G154400 Sobic003G154400 Sobic001G172050--Sobic003G154400
Octagon: transcription factors


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