Gene annotation
Transcriptome id Sobic.001G331500.1
Synonym Sb01g032040
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WVN8
Pfam -
Panther DB PTHR31439 PTHR31439:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15020 : -
RAP-DB (Rice) LOC_Os03g25850.1 : expressed protein
MaizeGDB (Corn) Zm00025a002950
Brachypodium -
Barley HORVU1Hr1G014140.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
3 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
5 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
6 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
7 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
8 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
9 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
10 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
12 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
13 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
15 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
16 Sobic.009G256100 expressed protein -
17 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
18 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
20 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G331500 Sobic001G331500 Sobic004G165500 Sobic004G165500 Sobic001G331500--Sobic004G165500 Sobic001G298400 Sobic001G298400 Sobic001G331500--Sobic001G298400 Sobic007G105500 Sobic007G105500 Sobic001G331500--Sobic007G105500 Sobic006G093100 Sobic006G093100 Sobic001G331500--Sobic006G093100 Sobic003G367500 Sobic003G367500 Sobic001G331500--Sobic003G367500 Sobic004G215800 Sobic004G215800 Sobic001G331500--Sobic004G215800 Sobic002G404800 Sobic002G404800 Sobic001G331500--Sobic002G404800 Sobic003G036200 Sobic003G036200 Sobic001G331500--Sobic003G036200 Sobic009G048900 Sobic009G048900 Sobic001G331500--Sobic009G048900 Sobic003G042900 Sobic003G042900 Sobic004G165500--Sobic003G042900 Sobic001G073300 Sobic001G073300 Sobic004G165500--Sobic001G073300 Sobic002G390100 Sobic002G390100 Sobic004G165500--Sobic002G390100 Sobic009G256100 Sobic009G256100 Sobic004G165500--Sobic009G256100 Sobic004G165500--Sobic007G105500 Sobic004G165500--Sobic006G093100 Sobic004G165500--Sobic002G404800 Sobic004G165500--Sobic004G215800 Sobic010G104800 Sobic010G104800 Sobic004G165500--Sobic010G104800 Sobic001G298400--Sobic010G104800 Sobic001G298400--Sobic001G073300 Sobic001G298400--Sobic001G331500 Sobic001G298400--Sobic009G256100 Sobic003G314000 Sobic003G314000 Sobic001G298400--Sobic003G314000 Sobic002G119100 Sobic002G119100 Sobic001G298400--Sobic002G119100 Sobic001G298400--Sobic004G165500 Sobic010G218200 Sobic010G218200 Sobic001G298400--Sobic010G218200 Sobic001G298400--Sobic002G404800 Sobic007G105500--Sobic004G215800 Sobic007G105500--Sobic003G036200 Sobic007G105500--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic007G105500--Sobic003G185900 Sobic007G105500--Sobic003G367500 Sobic005G101200 Sobic005G101200 Sobic007G105500--Sobic005G101200 Sobic007G105500--Sobic009G256100 Sobic008G033000 Sobic008G033000 Sobic007G105500--Sobic008G033000 Sobic010G085100 Sobic010G085100 Sobic007G105500--Sobic010G085100 Sobic006G093100--Sobic004G215800 Sobic006G093100--Sobic002G390100 Sobic006G093100--Sobic003G036200 Sobic002G196600 Sobic002G196600 Sobic006G093100--Sobic002G196600 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic006G093100--Sobic003G042900 Sobic006G093100--Sobic008G033000 Sobic006G093100--Sobic002G404800 Sobic003G367500--Sobic004G215800 Sobic003G367500--Sobic007G105500 Sobic003G398800 Sobic003G398800 Sobic003G367500--Sobic003G398800 Sobic004G154200 Sobic004G154200 Sobic003G367500--Sobic004G154200 Sobic010G039500 Sobic010G039500 Sobic003G367500--Sobic010G039500 Sobic002G324500 Sobic002G324500 Sobic003G367500--Sobic002G324500 Sobic003G127800 Sobic003G127800 Sobic003G367500--Sobic003G127800 Sobic004G059800 Sobic004G059800 Sobic003G367500--Sobic004G059800 Sobic005G089600 Sobic005G089600 Sobic003G367500--Sobic005G089600 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G215800--Sobic003G097600 Sobic004G112100 Sobic004G112100 Sobic004G215800--Sobic004G112100 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic002G404800--Sobic004G112100 Sobic003G036200--Sobic007G105500 Sobic003G036200--Sobic004G215800 Sobic003G036200--Sobic002G390100 Sobic003G036200--Sobic002G404800 Sobic003G036200--Sobic003G185900 Sobic003G036200--Sobic005G101200 Sobic003G036200--Sobic010G085100 Sobic003G036200--Sobic009G256100 Sobic003G036200--Sobic008G033200 Sobic009G048900--Sobic004G112100 Sobic006G244000 Sobic006G244000 Sobic009G048900--Sobic006G244000 Sobic006G153400 Sobic006G153400 Sobic009G048900--Sobic006G153400 Sobic009G048900--Sobic010G104800 Sobic006G057866 Sobic006G057866 Sobic009G048900--Sobic006G057866 Sobic001G446100 Sobic001G446100 Sobic009G048900--Sobic001G446100 Sobic009G048900--Sobic003G127800 Sobic009G048900--Sobic004G215800 Sobic001G540300 Sobic001G540300 Sobic009G048900--Sobic001G540300
Octagon: transcription factors


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