Gene annotation
Transcriptome id Sobic.006G151200.1
Synonym Sb06g022910
Functional annotation expressed protein
UniProt C5YCF5
Pfam PF12579
Panther DB PTHR14000 PTHR14000:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60670 : Protein of unknown function (DUF3755)
RAP-DB (Rice) LOC_Os04g44210.1 : expressed protein
MaizeGDB (Corn) Zm00025a010628 , Zm00025a056526
Brachypodium KQJ83652
Barley HORVU2Hr1G090090.9 , HORVU2Hr1G090090.2 , HORVU2Hr1G090090.3 , HORVU2Hr1G090090.1 , HORVU2Hr1G090090.4 , HORVU2Hr1G090090.5
Wheat TraesCS2A02G378600 , TraesCS2D02G375000 , TraesCS2B02G395600
Populus -


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cDNA sequences
Sobic.006G151200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
2 Sobic.008G193200 expressed protein -
3 Sobic.003G403900 "domain confirmed by Pfam database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
4 Sobic.003G050000 thiol-disulphide oxidoreductase DCC, putative, expressed -
5 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
6 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
7 Sobic.004G165700 expressed protein -
8 Sobic.001G020600 cyclase/dehydrase family protein, expressed -
9 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
10 Sobic.004G304800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
11 Sobic.009G049000 - -
12 Sobic.002G211200 - -
13 Sobic.001G193800 - -
14 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
16 Sobic.009G045600 pro-resilin precursor, putative, expressed -
17 Sobic.010G138800 phosphate transporter 1, putative, expressed -
18 Sobic.008G061300 - -
19 Sobic.004G017000 leucine rich repeat protein, putative, expressed -
20 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic006G151200 Sobic006G151200 Sobic009G133800 Sobic009G133800 Sobic006G151200--Sobic009G133800 Sobic008G193200 Sobic008G193200 Sobic006G151200--Sobic008G193200 Sobic003G403900 Sobic003G403900 Sobic006G151200--Sobic003G403900 Sobic003G050000 Sobic003G050000 Sobic006G151200--Sobic003G050000 Sobic001G374400 Sobic001G374400 Sobic006G151200--Sobic001G374400 Sobic003G285600 Sobic003G285600 Sobic006G151200--Sobic003G285600 Sobic004G165700 Sobic004G165700 Sobic006G151200--Sobic004G165700 Sobic001G020600 Sobic001G020600 Sobic006G151200--Sobic001G020600 Sobic009G246400 Sobic009G246400 Sobic006G151200--Sobic009G246400 Sobic008G044450 Sobic008G044450 Sobic009G133800--Sobic008G044450 Sobic007G028200 Sobic007G028200 Sobic009G133800--Sobic007G028200 Sobic001G176700 Sobic001G176700 Sobic009G133800--Sobic001G176700 Sobic010G162200 Sobic010G162200 Sobic009G133800--Sobic010G162200 Sobic008G061300 Sobic008G061300 Sobic009G133800--Sobic008G061300 Sobic007G123700 Sobic007G123700 Sobic009G133800--Sobic007G123700 Sobic009G133800--Sobic001G374400 Sobic009G133800--Sobic003G285600 Sobic003G339300 Sobic003G339300 Sobic009G133800--Sobic003G339300 Sobic009G049000 Sobic009G049000 Sobic008G193200--Sobic009G049000 Sobic008G193200--Sobic003G403900 Sobic008G193200--Sobic001G374400 Sobic001G252401 Sobic001G252401 Sobic008G193200--Sobic001G252401 Sobic010G188300 Sobic010G188300 Sobic008G193200--Sobic010G188300 Sobic010G042400 Sobic010G042400 Sobic008G193200--Sobic010G042400 Sobic008G193200--Sobic004G165700 Sobic001G298400 Sobic001G298400 Sobic008G193200--Sobic001G298400 Sobic010G006300 Sobic010G006300 Sobic008G193200--Sobic010G006300 Sobic006G158700 Sobic006G158700 Sobic003G403900--Sobic006G158700 Sobic009G133700 Sobic009G133700 Sobic003G403900--Sobic009G133700 Sobic009G250400 Sobic009G250400 Sobic003G403900--Sobic009G250400 Sobic007G157300 Sobic007G157300 Sobic003G403900--Sobic007G157300 Sobic003G094100 Sobic003G094100 Sobic003G403900--Sobic003G094100 Sobic003G403900--Sobic004G165700 Sobic001G180200 Sobic001G180200 Sobic003G403900--Sobic001G180200 Sobic009G004100 Sobic009G004100 Sobic003G403900--Sobic009G004100 Sobic007G135800 Sobic007G135800 Sobic003G403900--Sobic007G135800 Sobic006G177400 Sobic006G177400 Sobic003G050000--Sobic006G177400 Sobic003G403800 Sobic003G403800 Sobic003G050000--Sobic003G403800 Sobic003G050000--Sobic003G285600 Sobic001G018000 Sobic001G018000 Sobic003G050000--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic003G050000--Sobic004G268400 Sobic007G016600 Sobic007G016600 Sobic003G050000--Sobic007G016600 Sobic001G411100 Sobic001G411100 Sobic003G050000--Sobic001G411100 Sobic001G434000 Sobic001G434000 Sobic003G050000--Sobic001G434000 Sobic003G050000--Sobic004G165700 Sobic001G374400--Sobic008G193200 Sobic002G324700 Sobic002G324700 Sobic001G374400--Sobic002G324700 Sobic001G374400--Sobic001G176700 Sobic001G374400--Sobic009G133800 Sobic001G374400--Sobic001G298400 Sobic002G085400 Sobic002G085400 Sobic001G374400--Sobic002G085400 Sobic001G374400--Sobic009G049000 Sobic001G374400--Sobic003G285600 Sobic001G374400--Sobic007G028200 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic010G162500 Sobic010G162500 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic003G285600--Sobic003G097701 Sobic004G165700--Sobic003G403900 Sobic004G165700--Sobic009G133700 Sobic004G165700--Sobic007G157300 Sobic004G165700--Sobic009G004100 Sobic004G165700--Sobic010G042400 Sobic003G203000 Sobic003G203000 Sobic004G165700--Sobic003G203000 Sobic004G165700--Sobic006G158700 Sobic009G237000 Sobic009G237000 Sobic004G165700--Sobic009G237000 Sobic009G024300 Sobic009G024300 Sobic004G165700--Sobic009G024300 Sobic004G200000 Sobic004G200000 Sobic001G020600--Sobic004G200000 Sobic003G043650 Sobic003G043650 Sobic001G020600--Sobic003G043650 Sobic009G082500 Sobic009G082500 Sobic001G020600--Sobic009G082500 Sobic008G173700 Sobic008G173700 Sobic001G020600--Sobic008G173700 Sobic005G083866 Sobic005G083866 Sobic001G020600--Sobic005G083866 Sobic001G214400 Sobic001G214400 Sobic001G020600--Sobic001G214400 Sobic007G016300 Sobic007G016300 Sobic001G020600--Sobic007G016300 Sobic004G047001 Sobic004G047001 Sobic001G020600--Sobic004G047001 Sobic002G331200 Sobic002G331200 Sobic001G020600--Sobic002G331200 Sobic002G161400 Sobic002G161400 Sobic009G246400--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic009G246400--Sobic004G344600 Sobic003G304300 Sobic003G304300 Sobic009G246400--Sobic003G304300 Sobic003G339200 Sobic003G339200 Sobic009G246400--Sobic003G339200 Sobic004G128900 Sobic004G128900 Sobic009G246400--Sobic004G128900 Sobic001G112900 Sobic001G112900 Sobic009G246400--Sobic001G112900 Sobic006G191500 Sobic006G191500 Sobic009G246400--Sobic006G191500 Sobic010G113200 Sobic010G113200 Sobic009G246400--Sobic010G113200 Sobic010G100900 Sobic010G100900 Sobic009G246400--Sobic010G100900
Octagon: transcription factors


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