Gene annotation
Transcriptome id Sobic.001G193800.1
Synonym
Functional annotation -
UniProt A0A1B6QJV4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G176700 CBS domain containing protein, expressed -
2 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
3 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
4 Sobic.006G122500 methyltransferase domain containing protein, expressed -
5 Sobic.010G019200 - -
6 Sobic.001G126500 - -
7 Sobic.001G505800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
8 Sobic.006G049200 violaxanthin de-epoxidase, putative, expressed K09839: VDE, violaxanthin de-epoxidase
9 Sobic.003G339300 expressed protein -
10 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
11 Sobic.003G182501 - -
12 Sobic.006G205000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
13 Sobic.001G252401 - -
14 Sobic.004G126100 receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
16 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
18 Sobic.007G004750 - -
19 Sobic.004G289300 expressed protein -
20 Sobic.002G085400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G193800 Sobic001G193800 Sobic001G176700 Sobic001G176700 Sobic001G193800--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic001G193800--Sobic003G285600 Sobic010G162200 Sobic010G162200 Sobic001G193800--Sobic010G162200 Sobic006G122500 Sobic006G122500 Sobic001G193800--Sobic006G122500 Sobic010G019200 Sobic010G019200 Sobic001G193800--Sobic010G019200 Sobic001G126500 Sobic001G126500 Sobic001G193800--Sobic001G126500 Sobic001G505800 Sobic001G505800 Sobic001G193800--Sobic001G505800 Sobic006G049200 Sobic006G049200 Sobic001G193800--Sobic006G049200 Sobic003G339300 Sobic003G339300 Sobic001G193800--Sobic003G339300 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic001G252401 Sobic001G252401 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G403800 Sobic003G403800 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic010G162200--Sobic004G197700 Sobic006G122500--Sobic006G049200 Sobic006G122500--Sobic001G252401 Sobic006G122500--Sobic010G006300 Sobic006G122500--Sobic010G162500 Sobic004G289300 Sobic004G289300 Sobic006G122500--Sobic004G289300 Sobic004G342500 Sobic004G342500 Sobic006G122500--Sobic004G342500 Sobic006G122500--Sobic003G285600 Sobic006G122500--Sobic003G403800 Sobic006G122500--Sobic001G193800 Sobic008G094150 Sobic008G094150 Sobic010G019200--Sobic008G094150 Sobic004G100000 Sobic004G100000 Sobic010G019200--Sobic004G100000 Sobic008G005900 Sobic008G005900 Sobic010G019200--Sobic008G005900 Sobic010G019200--Sobic006G049200 Sobic003G080000 Sobic003G080000 Sobic010G019200--Sobic003G080000 Sobic001G087800 Sobic001G087800 Sobic010G019200--Sobic001G087800 Sobic006G128500 Sobic006G128500 Sobic010G019200--Sobic006G128500 Sobic001G470700 Sobic001G470700 Sobic010G019200--Sobic001G470700 Sobic005G173100 Sobic005G173100 Sobic010G019200--Sobic005G173100 Sobic001G126500--Sobic008G094150 Sobic001G028200 Sobic001G028200 Sobic001G126500--Sobic001G028200 Sobic001G126500--Sobic001G193800 Sobic001G126500--Sobic004G208301 Sobic001G126500--Sobic001G176700 Sobic001G126500--Sobic010G162200 Sobic004G319400 Sobic004G319400 Sobic001G126500--Sobic004G319400 Sobic006G205000 Sobic006G205000 Sobic001G126500--Sobic006G205000 Sobic005G214150 Sobic005G214150 Sobic001G126500--Sobic005G214150 Sobic004G013900 Sobic004G013900 Sobic001G505800--Sobic004G013900 Sobic001G242700 Sobic001G242700 Sobic001G505800--Sobic001G242700 Sobic010G058600 Sobic010G058600 Sobic001G505800--Sobic010G058600 Sobic007G011100 Sobic007G011100 Sobic001G505800--Sobic007G011100 Sobic001G083000 Sobic001G083000 Sobic001G505800--Sobic001G083000 Sobic001G505800--Sobic001G193800 Sobic001G222150 Sobic001G222150 Sobic001G505800--Sobic001G222150 Sobic001G505800--Sobic007G004750 Sobic001G150901 Sobic001G150901 Sobic001G505800--Sobic001G150901 Sobic006G049200--Sobic006G122500 Sobic006G049200--Sobic010G019200 Sobic004G235100 Sobic004G235100 Sobic006G049200--Sobic004G235100 Sobic007G018900 Sobic007G018900 Sobic006G049200--Sobic007G018900 Sobic006G207700 Sobic006G207700 Sobic006G049200--Sobic006G207700 Sobic006G049200--Sobic004G342500 Sobic006G049200--Sobic008G094150 Sobic009G191900 Sobic009G191900 Sobic006G049200--Sobic009G191900 Sobic006G049200--Sobic003G080000 Sobic004G322650 Sobic004G322650 Sobic003G339300--Sobic004G322650 Sobic003G160433 Sobic003G160433 Sobic003G339300--Sobic003G160433 Sobic002G180732 Sobic002G180732 Sobic003G339300--Sobic002G180732 Sobic005G216900 Sobic005G216900 Sobic003G339300--Sobic005G216900 Sobic004G157050 Sobic004G157050 Sobic003G339300--Sobic004G157050 Sobic003G160300 Sobic003G160300 Sobic003G339300--Sobic003G160300 Sobic001G054050 Sobic001G054050 Sobic003G339300--Sobic001G054050 Sobic003G050100 Sobic003G050100 Sobic003G339300--Sobic003G050100 Sobic008G171200 Sobic008G171200 Sobic003G339300--Sobic008G171200
Octagon: transcription factors


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