Gene annotation
Transcriptome id Sobic.003G182501.1
Synonym -
Functional annotation -
UniProt A0A1W0VXX3
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF548
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39530 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os08g25280.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) Zm00025a028822
Brachypodium KQK11765
Barley HORVU3Hr1G115530.29 , HORVU3Hr1G115530.28 , HORVU3Hr1G115530.23 , HORVU3Hr1G115530.22 , HORVU3Hr1G115530.21 , HORVU3Hr1G115530.20 , HORVU3Hr1G115530.27 , HORVU3Hr1G115530.26 , HORVU3Hr1G115530.25 , HORVU3Hr1G115530.24 , HORVU3Hr1G115530.38 , HORVU3Hr1G115530.39 , HORVU3Hr1G115530.30 , HORVU3Hr1G115530.31 , HORVU3Hr1G115530.32 , HORVU3Hr1G115530.33 , HORVU3Hr1G115530.34 , HORVU3Hr1G115530.35 , HORVU3Hr1G115530.36 , HORVU3Hr1G115530.37 , HORVU3Hr1G115530.8 , HORVU3Hr1G115530.9 , HORVU3Hr1G115530.1 , HORVU3Hr1G115530.2 , HORVU3Hr1G115530.3 , HORVU3Hr1G115530.4 , HORVU3Hr1G115530.5 , HORVU3Hr1G115530.6 , HORVU3Hr1G115530.7 , HORVU3Hr1G115530.12 , HORVU3Hr1G115530.13 , HORVU3Hr1G115530.10 , HORVU3Hr1G115530.11 , HORVU3Hr1G115530.16 , HORVU3Hr1G115530.17 , HORVU3Hr1G115530.14 , HORVU3Hr1G115530.15 , HORVU3Hr1G115530.18 , HORVU3Hr1G115530.19 , HORVU3Hr1G115530.60 , HORVU3Hr1G115530.49 , HORVU3Hr1G115530.41 , HORVU3Hr1G115530.40 , HORVU3Hr1G115530.43 , HORVU3Hr1G115530.42 , HORVU3Hr1G115530.45 , HORVU3Hr1G115530.44 , HORVU3Hr1G115530.47 , HORVU3Hr1G115530.46 , HORVU3Hr1G115530.58 , HORVU3Hr1G115530.59 , HORVU3Hr1G115530.56 , HORVU3Hr1G115530.57 , HORVU3Hr1G115530.54 , HORVU3Hr1G115530.55 , HORVU3Hr1G115530.52 , HORVU3Hr1G115530.53 , HORVU3Hr1G115530.50
Wheat TraesCS3D02G533600
Populus PNT29067


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451600 cytochrome P450 protein, putative, expressed -
2 Sobic.004G246000 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14780: DHX37, ATP-dependent RNA helicase DHX37/DHR1
3 Sobic.001G193800 - -
4 Sobic.003G368200 expressed protein -
5 Sobic.008G094150 - -
6 Sobic.006G192150 - -
7 Sobic.004G073300 multidrug resistance protein, putative, expressed -
8 Sobic.004G193100 potassium channel AKT1, putative, expressed -
9 Sobic.006G280700 - -
10 Sobic.002G425400 - -
11 Sobic.001G092250 - -
12 Sobic.009G087360 - -
13 Sobic.010G094200 - -
14 Sobic.010G124700 lectin-like receptor kinase, putative, expressed -
15 Sobic.003G182700 protein phosphatase 2C containing protein, expressed -
16 Sobic.010G019200 - -
17 Sobic.002G314100 dimethyladenosine transferase, putative, expressed K14191: 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
18 Sobic.005G057700 expressed protein -
19 Sobic.003G353900 - -
20 Sobic.007G145901 - K02705: photosystem II CP43 chlorophyll apoprotein


Gene co-expression network
sample Sobic003G182501 Sobic003G182501 Sobic001G451600 Sobic001G451600 Sobic003G182501--Sobic001G451600 Sobic004G246000 Sobic004G246000 Sobic003G182501--Sobic004G246000 Sobic001G193800 Sobic001G193800 Sobic003G182501--Sobic001G193800 Sobic003G368200 Sobic003G368200 Sobic003G182501--Sobic003G368200 Sobic008G094150 Sobic008G094150 Sobic003G182501--Sobic008G094150 Sobic006G192150 Sobic006G192150 Sobic003G182501--Sobic006G192150 Sobic004G073300 Sobic004G073300 Sobic003G182501--Sobic004G073300 Sobic004G193100 Sobic004G193100 Sobic003G182501--Sobic004G193100 Sobic006G280700 Sobic006G280700 Sobic003G182501--Sobic006G280700 Sobic010G280000 Sobic010G280000 Sobic001G451600--Sobic010G280000 Sobic005G110529 Sobic005G110529 Sobic001G451600--Sobic005G110529 Sobic010G214950 Sobic010G214950 Sobic001G451600--Sobic010G214950 Sobic001G150901 Sobic001G150901 Sobic001G451600--Sobic001G150901 Sobic002G425400 Sobic002G425400 Sobic001G451600--Sobic002G425400 Sobic001G059150 Sobic001G059150 Sobic001G451600--Sobic001G059150 Sobic003G372850 Sobic003G372850 Sobic001G451600--Sobic003G372850 Sobic008G108700 Sobic008G108700 Sobic001G451600--Sobic008G108700 Sobic008G093101 Sobic008G093101 Sobic001G451600--Sobic008G093101 Sobic004G215650 Sobic004G215650 Sobic004G246000--Sobic004G215650 Sobic007G163200 Sobic007G163200 Sobic004G246000--Sobic007G163200 Sobic001G504300 Sobic001G504300 Sobic004G246000--Sobic001G504300 Sobic003G414200 Sobic003G414200 Sobic004G246000--Sobic003G414200 Sobic004G194600 Sobic004G194600 Sobic004G246000--Sobic004G194600 Sobic010G123650 Sobic010G123650 Sobic004G246000--Sobic010G123650 Sobic003G123950 Sobic003G123950 Sobic004G246000--Sobic003G123950 Sobic003G168700 Sobic003G168700 Sobic004G246000--Sobic003G168700 Sobic002G118000 Sobic002G118000 Sobic004G246000--Sobic002G118000 Sobic001G176700 Sobic001G176700 Sobic001G193800--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic001G193800--Sobic003G285600 Sobic010G162200 Sobic010G162200 Sobic001G193800--Sobic010G162200 Sobic006G122500 Sobic006G122500 Sobic001G193800--Sobic006G122500 Sobic010G019200 Sobic010G019200 Sobic001G193800--Sobic010G019200 Sobic001G126500 Sobic001G126500 Sobic001G193800--Sobic001G126500 Sobic001G505800 Sobic001G505800 Sobic001G193800--Sobic001G505800 Sobic006G049200 Sobic006G049200 Sobic001G193800--Sobic006G049200 Sobic003G339300 Sobic003G339300 Sobic001G193800--Sobic003G339300 Sobic004G330800 Sobic004G330800 Sobic003G368200--Sobic004G330800 Sobic003G368200--Sobic003G182501 Sobic003G030500 Sobic003G030500 Sobic003G368200--Sobic003G030500 Sobic006G207700 Sobic006G207700 Sobic003G368200--Sobic006G207700 Sobic004G187701 Sobic004G187701 Sobic003G368200--Sobic004G187701 Sobic006G095100 Sobic006G095100 Sobic003G368200--Sobic006G095100 Sobic005G102401 Sobic005G102401 Sobic003G368200--Sobic005G102401 Sobic003G368200--Sobic004G246000 Sobic003G368200--Sobic001G126500 Sobic008G094150--Sobic010G019200 Sobic004G100000 Sobic004G100000 Sobic008G094150--Sobic004G100000 Sobic008G005900 Sobic008G005900 Sobic008G094150--Sobic008G005900 Sobic001G087800 Sobic001G087800 Sobic008G094150--Sobic001G087800 Sobic004G023600 Sobic004G023600 Sobic008G094150--Sobic004G023600 Sobic001G300301 Sobic001G300301 Sobic008G094150--Sobic001G300301 Sobic008G094150--Sobic001G126500 Sobic004G250000 Sobic004G250000 Sobic008G094150--Sobic004G250000 Sobic008G094150--Sobic006G049200 Sobic009G087360 Sobic009G087360 Sobic006G192150--Sobic009G087360 Sobic006G192150--Sobic004G193100 Sobic002G314100 Sobic002G314100 Sobic006G192150--Sobic002G314100 Sobic003G388201 Sobic003G388201 Sobic006G192150--Sobic003G388201 Sobic010G023132 Sobic010G023132 Sobic006G192150--Sobic010G023132 Sobic001G499400 Sobic001G499400 Sobic006G192150--Sobic001G499400 Sobic004G143550 Sobic004G143550 Sobic006G192150--Sobic004G143550 Sobic003G024450 Sobic003G024450 Sobic006G192150--Sobic003G024450 Sobic003G396050 Sobic003G396050 Sobic006G192150--Sobic003G396050 Sobic010G276850 Sobic010G276850 Sobic004G073300--Sobic010G276850 Sobic007G011100 Sobic007G011100 Sobic004G073300--Sobic007G011100 Sobic010G091250 Sobic010G091250 Sobic004G073300--Sobic010G091250 Sobic002G419550 Sobic002G419550 Sobic004G073300--Sobic002G419550 Sobic006G263250 Sobic006G263250 Sobic004G073300--Sobic006G263250 Sobic004G073300--Sobic004G193100 Sobic001G136850 Sobic001G136850 Sobic004G073300--Sobic001G136850 Sobic004G073300--Sobic002G314100 Sobic009G058900 Sobic009G058900 Sobic004G073300--Sobic009G058900 Sobic004G193100--Sobic002G314100 Sobic004G193100--Sobic006G192150 Sobic010G094200 Sobic010G094200 Sobic004G193100--Sobic010G094200 Sobic004G193100--Sobic002G419550 Sobic002G025200 Sobic002G025200 Sobic004G193100--Sobic002G025200 Sobic004G193100--Sobic004G073300 Sobic004G193100--Sobic010G276850 Sobic005G019000 Sobic005G019000 Sobic004G193100--Sobic005G019000 SobicK004201 SobicK004201 Sobic004G193100--SobicK004201 Sobic002G323800 Sobic002G323800 Sobic006G280700--Sobic002G323800 Sobic006G128233 Sobic006G128233 Sobic006G280700--Sobic006G128233 Sobic010G247700 Sobic010G247700 Sobic006G280700--Sobic010G247700 Sobic006G280700--Sobic009G087360 Sobic006G174725 Sobic006G174725 Sobic006G280700--Sobic006G174725 Sobic001G284300 Sobic001G284300 Sobic006G280700--Sobic001G284300 Sobic003G361150 Sobic003G361150 Sobic006G280700--Sobic003G361150 Sobic004G295200 Sobic004G295200 Sobic006G280700--Sobic004G295200 Sobic007G193000 Sobic007G193000 Sobic006G280700--Sobic007G193000
Octagon: transcription factors


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