Gene annotation
Transcriptome id Sobic.001G126500.1
Synonym
Functional annotation -
UniProt A0A1B6QIP8
Pfam PF13959
Panther DB PTHR24031 PTHR24031:SF305
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18600 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g34420.1 : DEAD/DEAH box helicase domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a007714
Brachypodium -
Barley -
Wheat TraesCS6D02G292400 , TraesCS6A02G356000 , TraesCS6A02G312900 , TraesCS6B02G342900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G094150 - -
2 Sobic.001G028200 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed -
3 Sobic.001G193800 - -
4 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
5 Sobic.001G176700 CBS domain containing protein, expressed -
6 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
7 Sobic.004G319400 - K10901: BLM, RECQL3, bloom syndrome protein
8 Sobic.006G205000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
9 Sobic.005G214150 - -
10 Sobic.010G019200 - -
11 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
12 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
13 Sobic.003G339300 expressed protein -
14 Sobic.003G368200 expressed protein -
15 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.001G445600 DNA polymerase I, putative, expressed -
17 Sobic.002G311900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G038800 SCAR-like protein 1, putative, expressed -
19 Sobic.003G097701 - -
20 Sobic.009G174150 - -


Gene co-expression network
sample Sobic001G126500 Sobic001G126500 Sobic008G094150 Sobic008G094150 Sobic001G126500--Sobic008G094150 Sobic001G028200 Sobic001G028200 Sobic001G126500--Sobic001G028200 Sobic001G193800 Sobic001G193800 Sobic001G126500--Sobic001G193800 Sobic004G208301 Sobic004G208301 Sobic001G126500--Sobic004G208301 Sobic001G176700 Sobic001G176700 Sobic001G126500--Sobic001G176700 Sobic010G162200 Sobic010G162200 Sobic001G126500--Sobic010G162200 Sobic004G319400 Sobic004G319400 Sobic001G126500--Sobic004G319400 Sobic006G205000 Sobic006G205000 Sobic001G126500--Sobic006G205000 Sobic005G214150 Sobic005G214150 Sobic001G126500--Sobic005G214150 Sobic010G019200 Sobic010G019200 Sobic008G094150--Sobic010G019200 Sobic004G100000 Sobic004G100000 Sobic008G094150--Sobic004G100000 Sobic008G005900 Sobic008G005900 Sobic008G094150--Sobic008G005900 Sobic001G087800 Sobic001G087800 Sobic008G094150--Sobic001G087800 Sobic004G023600 Sobic004G023600 Sobic008G094150--Sobic004G023600 Sobic001G300301 Sobic001G300301 Sobic008G094150--Sobic001G300301 Sobic008G094150--Sobic001G126500 Sobic004G250000 Sobic004G250000 Sobic008G094150--Sobic004G250000 Sobic006G049200 Sobic006G049200 Sobic008G094150--Sobic006G049200 Sobic001G028200--Sobic001G126500 Sobic005G103100 Sobic005G103100 Sobic001G028200--Sobic005G103100 Sobic009G111800 Sobic009G111800 Sobic001G028200--Sobic009G111800 Sobic003G089700 Sobic003G089700 Sobic001G028200--Sobic003G089700 Sobic004G109100 Sobic004G109100 Sobic001G028200--Sobic004G109100 Sobic002G025000 Sobic002G025000 Sobic001G028200--Sobic002G025000 Sobic002G130200 Sobic002G130200 Sobic001G028200--Sobic002G130200 Sobic007G149750 Sobic007G149750 Sobic001G028200--Sobic007G149750 Sobic003G401500 Sobic003G401500 Sobic001G028200--Sobic003G401500 Sobic001G193800--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic001G193800--Sobic003G285600 Sobic001G193800--Sobic010G162200 Sobic006G122500 Sobic006G122500 Sobic001G193800--Sobic006G122500 Sobic001G193800--Sobic010G019200 Sobic001G193800--Sobic001G126500 Sobic001G505800 Sobic001G505800 Sobic001G193800--Sobic001G505800 Sobic001G193800--Sobic006G049200 Sobic003G339300 Sobic003G339300 Sobic001G193800--Sobic003G339300 Sobic004G268600 Sobic004G268600 Sobic004G208301--Sobic004G268600 Sobic003G160300 Sobic003G160300 Sobic004G208301--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic004G208301--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic004G208301--Sobic007G085900 Sobic001G054050 Sobic001G054050 Sobic004G208301--Sobic001G054050 Sobic001G128000 Sobic001G128000 Sobic004G208301--Sobic001G128000 Sobic002G390200 Sobic002G390200 Sobic004G208301--Sobic002G390200 Sobic003G337200 Sobic003G337200 Sobic004G208301--Sobic003G337200 Sobic009G192200 Sobic009G192200 Sobic004G208301--Sobic009G192200 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic001G176700--Sobic004G208301 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic010G162200--Sobic004G197700 Sobic004G319400--Sobic001G126500 Sobic007G002600 Sobic007G002600 Sobic004G319400--Sobic007G002600 Sobic006G138600 Sobic006G138600 Sobic004G319400--Sobic006G138600 Sobic004G319400--Sobic010G162200 Sobic006G279200 Sobic006G279200 Sobic004G319400--Sobic006G279200 Sobic004G017000 Sobic004G017000 Sobic004G319400--Sobic004G017000 Sobic010G125700 Sobic010G125700 Sobic004G319400--Sobic010G125700 Sobic001G098100 Sobic001G098100 Sobic004G319400--Sobic001G098100 Sobic004G319400--Sobic001G193800 Sobic006G205000--Sobic008G094150 Sobic006G205000--Sobic006G049200 Sobic006G205000--Sobic006G122500 Sobic006G205000--Sobic001G126500 Sobic006G205000--Sobic001G193800 Sobic006G207700 Sobic006G207700 Sobic006G205000--Sobic006G207700 Sobic003G403800 Sobic003G403800 Sobic006G205000--Sobic003G403800 Sobic008G072400 Sobic008G072400 Sobic006G205000--Sobic008G072400 Sobic006G205000--Sobic010G019200 Sobic001G074800 Sobic001G074800 Sobic005G214150--Sobic001G074800 Sobic003G183000 Sobic003G183000 Sobic005G214150--Sobic003G183000 Sobic002G249700 Sobic002G249700 Sobic005G214150--Sobic002G249700 Sobic004G186800 Sobic004G186800 Sobic005G214150--Sobic004G186800 Sobic004G162100 Sobic004G162100 Sobic005G214150--Sobic004G162100 Sobic005G214150--Sobic008G094150 Sobic006G035200 Sobic006G035200 Sobic005G214150--Sobic006G035200 Sobic010G193100 Sobic010G193100 Sobic005G214150--Sobic010G193100 Sobic001G048500 Sobic001G048500 Sobic005G214150--Sobic001G048500
Octagon: transcription factors


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