Gene annotation
Transcriptome id Sobic.010G263500.2
Synonym Sb10g029980
Functional annotation expressed protein
UniProt A0A1W0VUZ7
Pfam PF07893
Panther DB PTHR33085 PTHR33085:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g05380.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
2 Sobic.007G141300 - -
3 Sobic.001G445600 DNA polymerase I, putative, expressed -
4 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
5 Sobic.010G006300 homeobox domain containing protein, expressed -
6 Sobic.009G137300 - -
7 Sobic.003G097701 - -
8 Sobic.001G134900 exostosin, putative, expressed -
9 Sobic.001G095900 - -
10 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
11 Sobic.002G222000 - -
12 Sobic.002G002000 expressed protein -
13 Sobic.001G176700 CBS domain containing protein, expressed -
14 Sobic.003G079725 - -
15 Sobic.006G093000 methyltransferase domain containing protein, expressed -
16 Sobic.009G069450 - -
17 Sobic.001G098100 cyclin, putative, expressed K06634: cyclin H
18 Sobic.002G025000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor like protein kinase, putative, expressed -
19 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
20 Sobic.009G196900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA"(PubMedID : 20499123)@down-regulated TF in developmental senescence(PubMedID : 27586543)@auxin response factor 14, putative, expressed K14486: K14486, auxin response factor


Gene co-expression network
sample Sobic010G263500 Sobic010G263500 Sobic010G162500 Sobic010G162500 Sobic010G263500--Sobic010G162500 Sobic007G141300 Sobic007G141300 Sobic010G263500--Sobic007G141300 Sobic001G445600 Sobic001G445600 Sobic010G263500--Sobic001G445600 Sobic007G028200 Sobic007G028200 Sobic010G263500--Sobic007G028200 Sobic010G006300 Sobic010G006300 Sobic010G263500--Sobic010G006300 Sobic009G137300 Sobic009G137300 Sobic010G263500--Sobic009G137300 Sobic003G097701 Sobic003G097701 Sobic010G263500--Sobic003G097701 Sobic001G134900 Sobic001G134900 Sobic010G263500--Sobic001G134900 Sobic001G095900 Sobic001G095900 Sobic010G263500--Sobic001G095900 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic001G176700 Sobic001G176700 Sobic010G162500--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162500--Sobic003G285600 Sobic010G162500--Sobic007G141300 Sobic001G252401 Sobic001G252401 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G162500--Sobic010G263500 Sobic007G141300--Sobic007G028200 Sobic007G141300--Sobic003G097701 Sobic005G166900 Sobic005G166900 Sobic007G141300--Sobic005G166900 Sobic002G025000 Sobic002G025000 Sobic007G141300--Sobic002G025000 Sobic007G141650 Sobic007G141650 Sobic007G141300--Sobic007G141650 Sobic010G225400 Sobic010G225400 Sobic007G141300--Sobic010G225400 Sobic001G011600 Sobic001G011600 Sobic007G141300--Sobic001G011600 Sobic005G096450 Sobic005G096450 Sobic007G141300--Sobic005G096450 Sobic010G107901 Sobic010G107901 Sobic007G141300--Sobic010G107901 Sobic004G208301 Sobic004G208301 Sobic001G445600--Sobic004G208301 Sobic001G073400 Sobic001G073400 Sobic001G445600--Sobic001G073400 Sobic001G138100 Sobic001G138100 Sobic001G445600--Sobic001G138100 Sobic004G337850 Sobic004G337850 Sobic001G445600--Sobic004G337850 Sobic002G130200 Sobic002G130200 Sobic001G445600--Sobic002G130200 Sobic009G123100 Sobic009G123100 Sobic001G445600--Sobic009G123100 Sobic006G057050 Sobic006G057050 Sobic001G445600--Sobic006G057050 Sobic003G169000 Sobic003G169000 Sobic001G445600--Sobic003G169000 Sobic004G087050 Sobic004G087050 Sobic001G445600--Sobic004G087050 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic003G403800 Sobic003G403800 Sobic010G006300--Sobic003G403800 Sobic006G122500 Sobic006G122500 Sobic010G006300--Sobic006G122500 Sobic007G080780 Sobic007G080780 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic007G189600 Sobic007G189600 Sobic009G137300--Sobic007G189600 Sobic001G536901 Sobic001G536901 Sobic009G137300--Sobic001G536901 Sobic003G256700 Sobic003G256700 Sobic009G137300--Sobic003G256700 Sobic009G137300--Sobic010G162500 Sobic002G324500 Sobic002G324500 Sobic009G137300--Sobic002G324500 Sobic009G137300--Sobic001G252401 Sobic008G047100 Sobic008G047100 Sobic009G137300--Sobic008G047100 Sobic005G101300 Sobic005G101300 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic003G097701--Sobic005G166900 Sobic005G167100 Sobic005G167100 Sobic003G097701--Sobic005G167100 Sobic001G054050 Sobic001G054050 Sobic003G097701--Sobic001G054050 Sobic010G107601 Sobic010G107601 Sobic003G097701--Sobic010G107601 Sobic003G097701--Sobic002G025000 Sobic003G172400 Sobic003G172400 Sobic003G097701--Sobic003G172400 Sobic003G097701--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic003G097701--Sobic008G140050 Sobic003G097701--Sobic007G141650 Sobic002G014900 Sobic002G014900 Sobic001G134900--Sobic002G014900 Sobic007G223250 Sobic007G223250 Sobic001G134900--Sobic007G223250 Sobic002G150032 Sobic002G150032 Sobic001G134900--Sobic002G150032 Sobic004G198701 Sobic004G198701 Sobic001G134900--Sobic004G198701 Sobic002G149966 Sobic002G149966 Sobic001G134900--Sobic002G149966 Sobic001G266000 Sobic001G266000 Sobic001G134900--Sobic001G266000 Sobic002G288700 Sobic002G288700 Sobic001G134900--Sobic002G288700 Sobic010G008433 Sobic010G008433 Sobic001G134900--Sobic010G008433 Sobic001G071250 Sobic001G071250 Sobic001G134900--Sobic001G071250 Sobic010G276301 Sobic010G276301 Sobic001G095900--Sobic010G276301 Sobic002G079200 Sobic002G079200 Sobic001G095900--Sobic002G079200 Sobic001G095900--Sobic010G162500 Sobic005G156900 Sobic005G156900 Sobic001G095900--Sobic005G156900 Sobic006G190150 Sobic006G190150 Sobic001G095900--Sobic006G190150 Sobic007G189300 Sobic007G189300 Sobic001G095900--Sobic007G189300 Sobic008G167401 Sobic008G167401 Sobic001G095900--Sobic008G167401 Sobic002G288800 Sobic002G288800 Sobic001G095900--Sobic002G288800 Sobic001G095900--Sobic010G006300
Octagon: transcription factors


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