Gene annotation
Transcriptome id Sobic.003G412600.2,Sobic.003G412600.1
Synonym Sb03g044690
Functional annotation expressed protein
UniProt C5XH05
Pfam -
Panther DB PTHR10825 PTHR10825:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13250 : RING finger protein
RAP-DB (Rice) LOC_Os01g70340.1 : expressed protein
MaizeGDB (Corn) Zm00025a026176 , Zm00025a039218
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
2 Sobic.003G047800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
3 Sobic.006G027300 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
4 Sobic.003G028800 Protein of unknown function (DUF1677)(PubMedID : 26465154)@Protein of unknown function (DUF1677)(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G331500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G168500 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.008G050100 SAP domain containing protein, expressed -
8 Sobic.004G165700 expressed protein -
9 Sobic.003G403900 "domain confirmed by Pfam database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
10 Sobic.004G302600 cyclin-T1-2, putative, expressed K15188: cyclin T
11 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
12 Sobic.008G024500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
13 Sobic.007G015500 no apical meristem protein, putative, expressed -
14 Sobic.009G143500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.006G147800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.004G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G193200 expressed protein -
18 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
19 Sobic.010G181100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD binding domain containing protein, expressed -
20 Sobic.009G045600 pro-resilin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G412600 Sobic003G412600 Sobic001G374400 Sobic001G374400 Sobic003G412600--Sobic001G374400 Sobic003G047800 Sobic003G047800 Sobic003G412600--Sobic003G047800 Sobic006G027300 Sobic006G027300 Sobic003G412600--Sobic006G027300 Sobic003G028800 Sobic003G028800 Sobic003G412600--Sobic003G028800 Sobic001G331500 Sobic001G331500 Sobic003G412600--Sobic001G331500 Sobic006G168500 Sobic006G168500 Sobic003G412600--Sobic006G168500 Sobic008G050100 Sobic008G050100 Sobic003G412600--Sobic008G050100 Sobic004G165700 Sobic004G165700 Sobic003G412600--Sobic004G165700 Sobic003G403900 Sobic003G403900 Sobic003G412600--Sobic003G403900 Sobic008G193200 Sobic008G193200 Sobic001G374400--Sobic008G193200 Sobic002G324700 Sobic002G324700 Sobic001G374400--Sobic002G324700 Sobic001G176700 Sobic001G176700 Sobic001G374400--Sobic001G176700 Sobic009G133800 Sobic009G133800 Sobic001G374400--Sobic009G133800 Sobic001G298400 Sobic001G298400 Sobic001G374400--Sobic001G298400 Sobic002G085400 Sobic002G085400 Sobic001G374400--Sobic002G085400 Sobic009G049000 Sobic009G049000 Sobic001G374400--Sobic009G049000 Sobic003G285600 Sobic003G285600 Sobic001G374400--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G374400--Sobic007G028200 Sobic002G286400 Sobic002G286400 Sobic003G047800--Sobic002G286400 Sobic002G403600 Sobic002G403600 Sobic003G047800--Sobic002G403600 Sobic001G531500 Sobic001G531500 Sobic003G047800--Sobic001G531500 Sobic002G190300 Sobic002G190300 Sobic003G047800--Sobic002G190300 Sobic003G146500 Sobic003G146500 Sobic003G047800--Sobic003G146500 Sobic003G174301 Sobic003G174301 Sobic003G047800--Sobic003G174301 Sobic001G073900 Sobic001G073900 Sobic003G047800--Sobic001G073900 Sobic002G321800 Sobic002G321800 Sobic003G047800--Sobic002G321800 Sobic009G123900 Sobic009G123900 Sobic003G047800--Sobic009G123900 Sobic004G162100 Sobic004G162100 Sobic006G027300--Sobic004G162100 Sobic001G159200 Sobic001G159200 Sobic006G027300--Sobic001G159200 Sobic004G153800 Sobic004G153800 Sobic006G027300--Sobic004G153800 Sobic004G126100 Sobic004G126100 Sobic006G027300--Sobic004G126100 Sobic001G470700 Sobic001G470700 Sobic006G027300--Sobic001G470700 Sobic008G042400 Sobic008G042400 Sobic006G027300--Sobic008G042400 Sobic008G094150 Sobic008G094150 Sobic006G027300--Sobic008G094150 Sobic001G360300 Sobic001G360300 Sobic006G027300--Sobic001G360300 Sobic003G368450 Sobic003G368450 Sobic006G027300--Sobic003G368450 Sobic006G123700 Sobic006G123700 Sobic003G028800--Sobic006G123700 Sobic002G422200 Sobic002G422200 Sobic003G028800--Sobic002G422200 Sobic003G028800--Sobic008G050100 Sobic002G101800 Sobic002G101800 Sobic003G028800--Sobic002G101800 Sobic003G173032 Sobic003G173032 Sobic003G028800--Sobic003G173032 Sobic008G023000 Sobic008G023000 Sobic003G028800--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G028800--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G028800--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G028800--Sobic007G183000 Sobic004G165500 Sobic004G165500 Sobic001G331500--Sobic004G165500 Sobic001G331500--Sobic001G298400 Sobic007G105500 Sobic007G105500 Sobic001G331500--Sobic007G105500 Sobic006G093100 Sobic006G093100 Sobic001G331500--Sobic006G093100 Sobic003G367500 Sobic003G367500 Sobic001G331500--Sobic003G367500 Sobic004G215800 Sobic004G215800 Sobic001G331500--Sobic004G215800 Sobic002G404800 Sobic002G404800 Sobic001G331500--Sobic002G404800 Sobic003G036200 Sobic003G036200 Sobic001G331500--Sobic003G036200 Sobic009G048900 Sobic009G048900 Sobic001G331500--Sobic009G048900 Sobic001G535500 Sobic001G535500 Sobic006G168500--Sobic001G535500 Sobic004G208000 Sobic004G208000 Sobic006G168500--Sobic004G208000 Sobic005G126900 Sobic005G126900 Sobic006G168500--Sobic005G126900 Sobic008G064750 Sobic008G064750 Sobic006G168500--Sobic008G064750 Sobic006G168500--Sobic004G153800 Sobic003G344300 Sobic003G344300 Sobic006G168500--Sobic003G344300 Sobic003G160400 Sobic003G160400 Sobic006G168500--Sobic003G160400 Sobic005G167450 Sobic005G167450 Sobic006G168500--Sobic005G167450 Sobic004G272500 Sobic004G272500 Sobic006G168500--Sobic004G272500 Sobic008G050100--Sobic003G028800 Sobic008G050100--Sobic006G123700 Sobic008G050100--Sobic002G101800 Sobic006G144800 Sobic006G144800 Sobic008G050100--Sobic006G144800 Sobic010G136900 Sobic010G136900 Sobic008G050100--Sobic010G136900 Sobic008G050100--Sobic003G173032 Sobic008G050100--Sobic002G422200 Sobic010G261400 Sobic010G261400 Sobic008G050100--Sobic010G261400 Sobic008G050100--Sobic008G002100 Sobic004G165700--Sobic003G403900 Sobic009G133700 Sobic009G133700 Sobic004G165700--Sobic009G133700 Sobic007G157300 Sobic007G157300 Sobic004G165700--Sobic007G157300 Sobic009G004100 Sobic009G004100 Sobic004G165700--Sobic009G004100 Sobic010G042400 Sobic010G042400 Sobic004G165700--Sobic010G042400 Sobic003G203000 Sobic003G203000 Sobic004G165700--Sobic003G203000 Sobic006G158700 Sobic006G158700 Sobic004G165700--Sobic006G158700 Sobic009G237000 Sobic009G237000 Sobic004G165700--Sobic009G237000 Sobic009G024300 Sobic009G024300 Sobic004G165700--Sobic009G024300 Sobic003G403900--Sobic006G158700 Sobic003G403900--Sobic009G133700 Sobic009G250400 Sobic009G250400 Sobic003G403900--Sobic009G250400 Sobic003G403900--Sobic007G157300 Sobic003G094100 Sobic003G094100 Sobic003G403900--Sobic003G094100 Sobic003G403900--Sobic004G165700 Sobic001G180200 Sobic001G180200 Sobic003G403900--Sobic001G180200 Sobic003G403900--Sobic009G004100 Sobic007G135800 Sobic007G135800 Sobic003G403900--Sobic007G135800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.