Gene annotation
Transcriptome id Sobic.003G028800.1
Synonym Sb03g002700
Functional annotation Protein of unknown function (DUF1677) (PubMedID : 26465154)
Protein of unknown function (DUF1677) (PubMedID : 26465154)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q111
Pfam PF07911
Panther DB PTHR33108 PTHR33108:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25840 : Protein of unknown function (DUF1677)
RAP-DB (Rice) LOC_Os01g10260.1 : expressed protein
MaizeGDB (Corn) Zm00025a022968
Brachypodium -
Barley HORVU3Hr1G027080.2 , HORVU3Hr1G027080.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.002G422200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.008G050100 SAP domain containing protein, expressed -
4 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
5 Sobic.003G173032 - -
6 Sobic.008G023000 expressed protein -
7 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
8 Sobic.001G527400 - -
9 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.004G226300 expressed protein -
11 Sobic.002G048250 - -
12 Sobic.006G144800 expressed protein -
13 Sobic.004G224300 5-azacytidine resistance protein related, putative, expressed -
14 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
15 Sobic.005G209800 nodulin, putative, expressed -
16 Sobic.003G337700 WRKY20, expressed -
17 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
18 Sobic.002G285525 - -
19 Sobic.003G283750 - -
20 Sobic.005G156700 laccase precursor protein, putative, expressed -


Gene co-expression network
sample Sobic003G028800 Sobic003G028800 Sobic006G123700 Sobic006G123700 Sobic003G028800--Sobic006G123700 Sobic002G422200 Sobic002G422200 Sobic003G028800--Sobic002G422200 Sobic008G050100 Sobic008G050100 Sobic003G028800--Sobic008G050100 Sobic002G101800 Sobic002G101800 Sobic003G028800--Sobic002G101800 Sobic003G173032 Sobic003G173032 Sobic003G028800--Sobic003G173032 Sobic008G023000 Sobic008G023000 Sobic003G028800--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G028800--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G028800--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G028800--Sobic007G183000 Sobic006G123700--Sobic002G101800 Sobic004G224300 Sobic004G224300 Sobic006G123700--Sobic004G224300 Sobic001G137200 Sobic001G137200 Sobic006G123700--Sobic001G137200 Sobic002G048250 Sobic002G048250 Sobic006G123700--Sobic002G048250 Sobic006G123700--Sobic003G173032 Sobic005G209800 Sobic005G209800 Sobic006G123700--Sobic005G209800 Sobic006G123700--Sobic008G002100 Sobic006G123700--Sobic001G527400 Sobic006G123700--Sobic007G183000 Sobic003G283750 Sobic003G283750 Sobic002G422200--Sobic003G283750 Sobic001G460700 Sobic001G460700 Sobic002G422200--Sobic001G460700 Sobic002G422200--Sobic003G028800 Sobic003G142900 Sobic003G142900 Sobic002G422200--Sobic003G142900 Sobic010G208300 Sobic010G208300 Sobic002G422200--Sobic010G208300 Sobic002G422200--Sobic002G101800 Sobic010G029200 Sobic010G029200 Sobic002G422200--Sobic010G029200 Sobic002G422200--Sobic003G173032 Sobic009G039400 Sobic009G039400 Sobic002G422200--Sobic009G039400 Sobic008G050100--Sobic003G028800 Sobic008G050100--Sobic006G123700 Sobic008G050100--Sobic002G101800 Sobic006G144800 Sobic006G144800 Sobic008G050100--Sobic006G144800 Sobic010G136900 Sobic010G136900 Sobic008G050100--Sobic010G136900 Sobic008G050100--Sobic003G173032 Sobic008G050100--Sobic002G422200 Sobic010G261400 Sobic010G261400 Sobic008G050100--Sobic010G261400 Sobic008G050100--Sobic008G002100 Sobic005G102200 Sobic005G102200 Sobic002G101800--Sobic005G102200 Sobic003G191800 Sobic003G191800 Sobic002G101800--Sobic003G191800 Sobic002G101800--Sobic006G123700 Sobic010G152700 Sobic010G152700 Sobic002G101800--Sobic010G152700 Sobic007G139000 Sobic007G139000 Sobic002G101800--Sobic007G139000 Sobic002G101800--Sobic001G137200 Sobic001G483700 Sobic001G483700 Sobic002G101800--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic002G101800--Sobic002G285525 Sobic003G111600 Sobic003G111600 Sobic002G101800--Sobic003G111600 Sobic003G173032--Sobic008G023000 Sobic003G173032--Sobic008G002100 Sobic003G173032--Sobic001G527400 Sobic003G173032--Sobic007G183000 Sobic004G226300 Sobic004G226300 Sobic003G173032--Sobic004G226300 Sobic003G173032--Sobic005G209800 Sobic005G231800 Sobic005G231800 Sobic003G173032--Sobic005G231800 Sobic003G173032--Sobic002G048250 Sobic006G171000 Sobic006G171000 Sobic003G173032--Sobic006G171000 Sobic008G023000--Sobic008G002100 Sobic008G023000--Sobic001G527400 Sobic008G023000--Sobic007G183000 Sobic008G023000--Sobic005G209800 Sobic008G023000--Sobic004G226300 Sobic008G023000--Sobic003G173032 Sobic008G023000--Sobic005G231800 Sobic008G023000--Sobic002G048250 Sobic008G023000--Sobic006G171000 Sobic008G002100--Sobic008G023000 Sobic008G002100--Sobic001G527400 Sobic008G002100--Sobic005G209800 Sobic008G002100--Sobic007G183000 Sobic008G002100--Sobic004G226300 Sobic008G002100--Sobic005G231800 Sobic008G002100--Sobic003G173032 Sobic008G002100--Sobic002G048250 Sobic008G002100--Sobic006G171000 Sobic001G527400--Sobic008G023000 Sobic001G527400--Sobic008G002100 Sobic001G527400--Sobic007G183000 Sobic001G527400--Sobic004G226300 Sobic001G527400--Sobic002G048250 Sobic001G527400--Sobic005G209800 Sobic001G527400--Sobic005G231800 Sobic001G527400--Sobic003G173032 Sobic001G527400--Sobic006G171000 Sobic007G183000--Sobic004G226300 Sobic007G183000--Sobic001G527400 Sobic007G183000--Sobic002G048250 Sobic007G183000--Sobic008G023000 Sobic007G183000--Sobic008G002100 Sobic007G183000--Sobic005G231800 Sobic007G183000--Sobic005G209800 Sobic007G183000--Sobic003G173032 Sobic007G183000--Sobic006G171000
Octagon: transcription factors


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