Gene annotation
Transcriptome id Sobic.005G072300.1
Synonym ATAAP3, AAP3, Sb05g005980
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amino acid transporter, putative, expressed
UniProt C5Y6S2
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF250
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os11g09020.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a030927 , Zm00025a025707 , Zm00025a034135 , Zm00025a044966 , Zm00025a009452 , Zm00025a026558 , Zm00025a054084 , Zm00025a054082 , Zm00025a012741
Brachypodium KQJ85086 , KQJ91992 , PNT76161 , PNT76162 , KQJ91991 , KQJ85085 , KQK10901 , PNT71213 , PNT71214 , KQK18868 , KQK18866 , KQK18867 , KQJ89071 , KQK06164 , KQJ83307 , KQK10853 , KQK18008 , KQK10902
Barley HORVU5Hr1G037660.9 , HORVU5Hr1G037660.8 , HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.7 , HORVU5Hr1G037660.6 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU3Hr1G081570.6 , HORVU3Hr1G081570.7 , HORVU3Hr1G081570.4 , HORVU3Hr1G081570.5 , HORVU3Hr1G081570.2 , HORVU3Hr1G081570.3 , HORVU3Hr1G081570.1 , HORVU3Hr1G081570.8 , HORVU3Hr1G081570.9 , HORVU3Hr1G081570.10 , HORVU2Hr1G084710.1 , HORVU2Hr1G084800.1 , HORVU3Hr1G091070.1 , HORVU3Hr1G091020.1 , HORVU7Hr1G088510.10 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU3Hr1G091120.1 , HORVU3Hr1G091120.2 , HORVU3Hr1G091120.3 , HORVU3Hr1G091120.4 , HORVU3Hr1G091120.5 , HORVU3Hr1G091120.6 , HORVU3Hr1G091120.7 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU7Hr1G088510.3 , HORVU7Hr1G088510.2 , HORVU7Hr1G088510.1 , HORVU7Hr1G088510.6 , HORVU7Hr1G088510.5 , HORVU7Hr1G088510.4 , HORVU7Hr1G088510.9 , HORVU7Hr1G088510.8 , HORVU3Hr1G091020.3 , HORVU3Hr1G091020.2 , HORVU3Hr1G091020.4 , HORVU7Hr1G039670.2 , HORVU7Hr1G039670.1
Wheat TraesCS4B02G100800 , TraesCS4D02G097400 , TraesCS3D02G402200 , TraesCS7D02G388300 , TraesCS3B02G441100 , TraesCS5B02G116100 , TraesCS7D02G366000 , TraesCS7B02G271151 , TraesCS7D02G196100 , TraesCS3D02G402300 , TraesCS2B02G266600 , TraesCS3B02G441200 , TraesCS5A02G115100 , TraesCS5D02G125700 , TraesCS3A02G406900 , TraesCS4A02G215300 , TraesCS7A02G194500 , TraesCS2B02G367000 , TraesCS7B02G100100 , TraesCS2D02G347000 , TraesCS2D02G346500 , TraesCS7A02G356639 , TraesCS3A02G407000 , TraesCS2A02G348600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G173200 IDD5(PubMedID : 24676859)@ZOS8-12 - C2H2 zinc finger protein, expressed -
2 Sobic.001G016201 - -
3 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
4 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
5 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
6 Sobic.009G121000 expressed protein -
7 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
8 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
9 Sobic.002G402600 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.001G483300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
12 Sobic.004G299000 expressed protein -
13 Sobic.002G385700 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
14 Sobic.006G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclin, putative, expressed -
15 Sobic.004G241500 expressed protein -
16 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
18 Sobic.001G468700 expressed protein -
19 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
20 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase


Gene co-expression network
sample Sobic005G072300 Sobic005G072300 Sobic007G173200 Sobic007G173200 Sobic005G072300--Sobic007G173200 Sobic001G016201 Sobic001G016201 Sobic005G072300--Sobic001G016201 Sobic001G073900 Sobic001G073900 Sobic005G072300--Sobic001G073900 Sobic008G117000 Sobic008G117000 Sobic005G072300--Sobic008G117000 Sobic001G118100 Sobic001G118100 Sobic005G072300--Sobic001G118100 Sobic009G121000 Sobic009G121000 Sobic005G072300--Sobic009G121000 Sobic004G001300 Sobic004G001300 Sobic005G072300--Sobic004G001300 Sobic004G028500 Sobic004G028500 Sobic005G072300--Sobic004G028500 Sobic002G402600 Sobic002G402600 Sobic005G072300--Sobic002G402600 Sobic009G191100 Sobic009G191100 Sobic007G173200--Sobic009G191100 Sobic007G173200--Sobic001G118100 Sobic001G532000 Sobic001G532000 Sobic007G173200--Sobic001G532000 Sobic006G173000 Sobic006G173000 Sobic007G173200--Sobic006G173000 Sobic006G225200 Sobic006G225200 Sobic007G173200--Sobic006G225200 Sobic007G113800 Sobic007G113800 Sobic007G173200--Sobic007G113800 Sobic009G140500 Sobic009G140500 Sobic007G173200--Sobic009G140500 Sobic002G401100 Sobic002G401100 Sobic007G173200--Sobic002G401100 Sobic004G113800 Sobic004G113800 Sobic007G173200--Sobic004G113800 Sobic001G420400 Sobic001G420400 Sobic001G016201--Sobic001G420400 Sobic001G016201--Sobic009G121000 Sobic010G153201 Sobic010G153201 Sobic001G016201--Sobic010G153201 Sobic001G016100 Sobic001G016100 Sobic001G016201--Sobic001G016100 Sobic005G118400 Sobic005G118400 Sobic001G016201--Sobic005G118400 Sobic003G332700 Sobic003G332700 Sobic001G016201--Sobic003G332700 Sobic007G185700 Sobic007G185700 Sobic001G016201--Sobic007G185700 Sobic002G006600 Sobic002G006600 Sobic001G016201--Sobic002G006600 Sobic003G442700 Sobic003G442700 Sobic001G016201--Sobic003G442700 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600 Sobic002G324500 Sobic002G324500 Sobic008G117000--Sobic002G324500 Sobic008G117000--Sobic001G073900 Sobic003G036200 Sobic003G036200 Sobic008G117000--Sobic003G036200 Sobic001G134100 Sobic001G134100 Sobic008G117000--Sobic001G134100 Sobic004G215800 Sobic004G215800 Sobic008G117000--Sobic004G215800 Sobic003G367500 Sobic003G367500 Sobic008G117000--Sobic003G367500 Sobic007G105500 Sobic007G105500 Sobic008G117000--Sobic007G105500 Sobic008G117000--Sobic003G332700 Sobic003G185900 Sobic003G185900 Sobic008G117000--Sobic003G185900 Sobic001G118100--Sobic004G001300 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic001G118100--Sobic009G140500 Sobic001G118100--Sobic004G113800 Sobic001G484800 Sobic001G484800 Sobic001G118100--Sobic001G484800 Sobic002G291700 Sobic002G291700 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic004G065650 Sobic004G065650 Sobic001G118100--Sobic004G065650 Sobic010G043800 Sobic010G043800 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic003G247400 Sobic003G247400 Sobic009G121000--Sobic003G247400 Sobic001G198100 Sobic001G198100 Sobic009G121000--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic003G276300 Sobic003G276300 Sobic009G121000--Sobic003G276300 Sobic007G103400 Sobic007G103400 Sobic009G121000--Sobic007G103400 Sobic010G002700 Sobic010G002700 Sobic009G121000--Sobic010G002700 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic003G003600 Sobic003G003600 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic001G468700 Sobic001G468700 Sobic004G028500--Sobic001G468700 Sobic003G313300 Sobic003G313300 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic003G017100 Sobic003G017100 Sobic004G028500--Sobic003G017100 Sobic004G028500--Sobic010G002700 Sobic005G045000 Sobic005G045000 Sobic004G028500--Sobic005G045000 Sobic004G028500--Sobic002G006600 Sobic003G004200 Sobic003G004200 Sobic004G028500--Sobic003G004200 Sobic004G028500--Sobic001G198100 Sobic002G031400 Sobic002G031400 Sobic002G402600--Sobic002G031400 Sobic001G420500 Sobic001G420500 Sobic002G402600--Sobic001G420500 Sobic009G260500 Sobic009G260500 Sobic002G402600--Sobic009G260500 Sobic009G210500 Sobic009G210500 Sobic002G402600--Sobic009G210500 Sobic010G277500 Sobic010G277500 Sobic002G402600--Sobic010G277500 Sobic005G039500 Sobic005G039500 Sobic002G402600--Sobic005G039500 Sobic002G402600--Sobic003G161000 Sobic001G407200 Sobic001G407200 Sobic002G402600--Sobic001G407200 Sobic008G150700 Sobic008G150700 Sobic002G402600--Sobic008G150700
Octagon: transcription factors


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