Gene annotation
Transcriptome id Sobic.001G186300.1
Synonym Sb01g016190, AtSec20
Functional annotation sec20 domain containing protein, expressed
UniProt C5WUD4
Pfam PF03908
Panther DB PTHR12825 PTHR12825:SF0
NCBI CDD -
KEGG Orthology K08497; protein transport protein SEC20
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24315 : Sec20 family protein
RAP-DB (Rice) LOC_Os02g44111.1 : sec20 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019907 , Zm00025a007076
Brachypodium KQK07091
Barley HORVU3Hr1G013820.3 , HORVU3Hr1G013820.2 , HORVU3Hr1G013820.1 , HORVU3Hr1G013820.7 , HORVU3Hr1G013820.6 , HORVU3Hr1G013820.5 , HORVU3Hr1G013820.4 , HORVU3Hr1G013820.9 , HORVU3Hr1G013820.8 , HORVU3Hr1G013820.13 , HORVU3Hr1G013820.34 , HORVU3Hr1G013820.11 , HORVU3Hr1G013820.36 , HORVU3Hr1G013820.31 , HORVU3Hr1G013820.30 , HORVU3Hr1G013820.15 , HORVU3Hr1G013820.14 , HORVU3Hr1G013820.19 , HORVU3Hr1G013820.18 , HORVU6Hr1G063210.1 , HORVU6Hr1G063210.10 , HORVU3Hr1G013820.28 , HORVU3Hr1G013820.29 , HORVU3Hr1G013820.22 , HORVU3Hr1G013820.23 , HORVU3Hr1G013820.20 , HORVU3Hr1G013820.21 , HORVU3Hr1G013820.26 , HORVU3Hr1G013820.27 , HORVU3Hr1G013820.24 , HORVU3Hr1G013820.25 , HORVU3Hr1G013820.35 , HORVU3Hr1G013820.12 , HORVU6Hr1G063210.2 , HORVU6Hr1G063210.3 , HORVU3Hr1G013820.10 , HORVU6Hr1G063210.6 , HORVU6Hr1G063210.7 , HORVU6Hr1G063210.4 , HORVU6Hr1G063210.5 , HORVU3Hr1G013820.17 , HORVU6Hr1G063210.8 , HORVU6Hr1G063210.9 , HORVU3Hr1G013820.16
Wheat TraesCS3A02G074700 , TraesCS6D02G231000 , TraesCSU02G049300 , TraesCS2B02G101900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G053800 - -
2 Sobic.001G268000 - -
3 Sobic.001G363900 - -
4 Sobic.010G271901 - -
5 Sobic.010G145500 expressed protein -
6 Sobic.008G148300 kinesin motor domain containing protein, putative, expressed -
7 Sobic.004G284001 - -
8 Sobic.008G166400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.001G233300 - -
10 Sobic.006G036700 - -
11 Sobic.001G542150 - -
12 Sobic.002G033300 expressed protein -
13 Sobic.007G095300 cbbY protein-related, putative, expressed -
14 Sobic.005G210850 - -
15 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
17 Sobic.006G035400 - -
18 Sobic.005G157733 - -
19 Sobic.006G036566 - -
20 Sobic.005G211600 zinc knuckle family protein, expressed -


Gene co-expression network
sample Sobic001G186300 Sobic001G186300 Sobic004G053800 Sobic004G053800 Sobic001G186300--Sobic004G053800 Sobic001G268000 Sobic001G268000 Sobic001G186300--Sobic001G268000 Sobic001G363900 Sobic001G363900 Sobic001G186300--Sobic001G363900 Sobic010G271901 Sobic010G271901 Sobic001G186300--Sobic010G271901 Sobic010G145500 Sobic010G145500 Sobic001G186300--Sobic010G145500 Sobic008G148300 Sobic008G148300 Sobic001G186300--Sobic008G148300 Sobic004G284001 Sobic004G284001 Sobic001G186300--Sobic004G284001 Sobic008G166400 Sobic008G166400 Sobic001G186300--Sobic008G166400 Sobic001G233300 Sobic001G233300 Sobic001G186300--Sobic001G233300 Sobic004G053800--Sobic001G363900 Sobic004G053800--Sobic001G186300 Sobic004G053800--Sobic001G268000 Sobic004G053800--Sobic010G271901 Sobic004G053800--Sobic010G145500 Sobic002G059932 Sobic002G059932 Sobic004G053800--Sobic002G059932 Sobic008G157500 Sobic008G157500 Sobic004G053800--Sobic008G157500 Sobic009G147300 Sobic009G147300 Sobic004G053800--Sobic009G147300 Sobic002G033300 Sobic002G033300 Sobic004G053800--Sobic002G033300 Sobic001G268000--Sobic001G186300 Sobic001G268000--Sobic004G053800 Sobic001G268000--Sobic001G363900 Sobic001G268000--Sobic010G271901 Sobic006G035400 Sobic006G035400 Sobic001G268000--Sobic006G035400 Sobic002G048100 Sobic002G048100 Sobic001G268000--Sobic002G048100 Sobic006G036700 Sobic006G036700 Sobic001G268000--Sobic006G036700 Sobic001G268000--Sobic010G145500 Sobic001G268000--Sobic001G233300 Sobic001G363900--Sobic004G053800 Sobic001G363900--Sobic001G268000 Sobic001G363900--Sobic001G186300 Sobic001G363900--Sobic002G059932 Sobic001G363900--Sobic010G145500 Sobic001G363900--Sobic010G271901 Sobic001G363900--Sobic002G048100 Sobic005G156400 Sobic005G156400 Sobic001G363900--Sobic005G156400 Sobic003G069875 Sobic003G069875 Sobic001G363900--Sobic003G069875 Sobic010G271901--Sobic006G036700 Sobic006G177900 Sobic006G177900 Sobic010G271901--Sobic006G177900 Sobic002G077400 Sobic002G077400 Sobic010G271901--Sobic002G077400 Sobic010G271901--Sobic010G145500 Sobic005G211600 Sobic005G211600 Sobic010G271901--Sobic005G211600 Sobic005G093800 Sobic005G093800 Sobic010G271901--Sobic005G093800 Sobic010G271901--Sobic001G268000 Sobic003G190100 Sobic003G190100 Sobic010G271901--Sobic003G190100 Sobic010G271901--Sobic004G053800 Sobic001G223550 Sobic001G223550 Sobic010G145500--Sobic001G223550 Sobic010G145500--Sobic001G233300 Sobic005G089400 Sobic005G089400 Sobic010G145500--Sobic005G089400 Sobic010G145500--Sobic010G271901 Sobic008G101100 Sobic008G101100 Sobic010G145500--Sobic008G101100 Sobic010G121200 Sobic010G121200 Sobic010G145500--Sobic010G121200 Sobic001G459600 Sobic001G459600 Sobic010G145500--Sobic001G459600 Sobic003G160100 Sobic003G160100 Sobic010G145500--Sobic003G160100 Sobic001G517800 Sobic001G517800 Sobic010G145500--Sobic001G517800 Sobic006G036566 Sobic006G036566 Sobic008G148300--Sobic006G036566 Sobic008G148300--Sobic008G166400 Sobic008G148300--Sobic001G186300 Sobic008G148300--Sobic002G033300 Sobic008G139800 Sobic008G139800 Sobic008G148300--Sobic008G139800 Sobic001G172700 Sobic001G172700 Sobic008G148300--Sobic001G172700 Sobic002G169400 Sobic002G169400 Sobic008G148300--Sobic002G169400 Sobic001G150000 Sobic001G150000 Sobic008G148300--Sobic001G150000 Sobic002G212500 Sobic002G212500 Sobic008G148300--Sobic002G212500 Sobic007G095300 Sobic007G095300 Sobic004G284001--Sobic007G095300 Sobic006G037900 Sobic006G037900 Sobic004G284001--Sobic006G037900 Sobic002G137850 Sobic002G137850 Sobic004G284001--Sobic002G137850 Sobic010G100300 Sobic010G100300 Sobic004G284001--Sobic010G100300 Sobic002G190300 Sobic002G190300 Sobic004G284001--Sobic002G190300 Sobic002G117500 Sobic002G117500 Sobic004G284001--Sobic002G117500 Sobic003G180600 Sobic003G180600 Sobic004G284001--Sobic003G180600 Sobic002G056500 Sobic002G056500 Sobic004G284001--Sobic002G056500 Sobic005G077300 Sobic005G077300 Sobic004G284001--Sobic005G077300 Sobic002G124600 Sobic002G124600 Sobic008G166400--Sobic002G124600 Sobic008G166400--Sobic002G117500 Sobic001G038601 Sobic001G038601 Sobic008G166400--Sobic001G038601 Sobic001G530900 Sobic001G530900 Sobic008G166400--Sobic001G530900 Sobic008G166400--Sobic002G033300 Sobic001G219700 Sobic001G219700 Sobic008G166400--Sobic001G219700 Sobic002G118200 Sobic002G118200 Sobic008G166400--Sobic002G118200 Sobic006G065600 Sobic006G065600 Sobic008G166400--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic008G166400--Sobic004G181600 Sobic002G153200 Sobic002G153200 Sobic001G233300--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G233300--Sobic002G143766 Sobic001G233300--Sobic001G223550 Sobic002G249300 Sobic002G249300 Sobic001G233300--Sobic002G249300 Sobic001G542150 Sobic001G542150 Sobic001G233300--Sobic001G542150 Sobic001G233300--Sobic010G145500 Sobic004G034600 Sobic004G034600 Sobic001G233300--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic001G233300--Sobic005G149700 Sobic001G000501 Sobic001G000501 Sobic001G233300--Sobic001G000501
Octagon: transcription factors


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