Gene annotation
Transcriptome id Sobic.008G166400.1
Synonym Sb08g021230
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1B6PE61
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF602
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g49380.2 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ84790 , KQJ87207 , KQJ84750
Barley HORVU4Hr1G000280.23 , HORVU4Hr1G000280.22 , HORVU4Hr1G000280.21 , HORVU4Hr1G000280.20 , HORVU4Hr1G000280.27 , HORVU4Hr1G000280.26 , HORVU4Hr1G000280.25 , HORVU4Hr1G000280.38 , HORVU4Hr1G000280.39 , HORVU4Hr1G000280.30 , HORVU4Hr1G000280.31 , HORVU4Hr1G000280.32 , HORVU4Hr1G000280.33 , HORVU4Hr1G000280.34 , HORVU4Hr1G000280.35 , HORVU4Hr1G000280.36 , HORVU4Hr1G000280.37 , HORVU4Hr1G000280.29 , HORVU4Hr1G000280.28 , HORVU4Hr1G000280.24 , HORVU2Hr1G000560.5 , HORVU2Hr1G000560.4 , HORVU2Hr1G000560.3 , HORVU2Hr1G000560.2 , HORVU2Hr1G000560.1 , HORVU4Hr1G000280.12 , HORVU4Hr1G000280.13 , HORVU4Hr1G000280.10 , HORVU4Hr1G000280.11 , HORVU4Hr1G000280.16 , HORVU4Hr1G000280.17 , HORVU4Hr1G000280.14 , HORVU4Hr1G000280.18 , HORVU4Hr1G000280.19 , HORVU4Hr1G000280.61 , HORVU4Hr1G000280.60 , HORVU2Hr1G000560.19 , HORVU2Hr1G000560.18 , HORVU2Hr1G000560.16 , HORVU2Hr1G000560.15 , HORVU2Hr1G000560.14 , HORVU2Hr1G000560.13 , HORVU2Hr1G000560.12 , HORVU2Hr1G000560.11 , HORVU2Hr1G000560.10 , HORVU2Hr1G000510.9 , HORVU2Hr1G000510.2 , HORVU2Hr1G000510.3 , HORVU2Hr1G000510.1 , HORVU2Hr1G000510.6 , HORVU2Hr1G000510.4 , HORVU2Hr1G000510.5 , HORVU4Hr1G000280.15 , HORVU2Hr1G000510.36 , HORVU4Hr1G000280.49 , HORVU4Hr1G000280.48 , HORVU4Hr1G000280.41 , HORVU4Hr1G000280.43 , HORVU4Hr1G000280.42 , HORVU4Hr1G000280.45 , HORVU4Hr1G000280.44 , HORVU4Hr1G000280.47 , HORVU4Hr1G000280.46 , HORVU4Hr1G000280.58 , HORVU4Hr1G000280.59 , HORVU4Hr1G000280.56 , HORVU4Hr1G000280.57 , HORVU4Hr1G000280.54 , HORVU4Hr1G000280.55 , HORVU4Hr1G000280.52 , HORVU4Hr1G000280.53 , HORVU4Hr1G000280.50 , HORVU4Hr1G000280.51 , HORVU4Hr1G000280.8 , HORVU4Hr1G000280.9 , HORVU4Hr1G000280.1 , HORVU4Hr1G000280.2 , HORVU4Hr1G000280.3 , HORVU4Hr1G000280.4 , HORVU4Hr1G000280.5 , HORVU4Hr1G000280.6 , HORVU4Hr1G000280.7 , HORVU2Hr1G000510.18 , HORVU2Hr1G000510.10 , HORVU2Hr1G000510.12 , HORVU2Hr1G000510.15 , HORVU2Hr1G000510.16 , HORVU2Hr1G000510.17 , HORVU2Hr1G000510.29 , HORVU2Hr1G000510.28 , HORVU2Hr1G000510.25 , HORVU2Hr1G000510.24 , HORVU2Hr1G000510.27 , HORVU2Hr1G000510.26 , HORVU2Hr1G000510.21 , HORVU2Hr1G000510.20 , HORVU2Hr1G000510.23 , HORVU2Hr1G000510.22 , HORVU4Hr1G000280.40 , HORVU2Hr1G000510.32 , HORVU2Hr1G000510.30 , HORVU2Hr1G000510.31 , HORVU2Hr1G000510.37 , HORVU2Hr1G000510.35 , HORVU2Hr1G000510.38 , HORVU2Hr1G000770.8 , HORVU2Hr1G000770.9 , HORVU2Hr1G000770.5 , HORVU2Hr1G000770.14 , HORVU2Hr1G000770.15 , HORVU2Hr1G000770.16 , HORVU2Hr1G000770.17 , HORVU2Hr1G000770.10 , HORVU2Hr1G000770.11 , HORVU2Hr1G000770.12 , HORVU2Hr1G000770.13 , HORVU2Hr1G000770.18 , HORVU2Hr1G000770.19 , HORVU2Hr1G000770.29 , HORVU2Hr1G000770.28 , HORVU2Hr1G000770.21 , HORVU2Hr1G000770.20 , HORVU2Hr1G000770.23 , HORVU2Hr1G000770.22 , HORVU2Hr1G000770.25 , HORVU2Hr1G000770.24 , HORVU2Hr1G000770.27 , HORVU2Hr1G000770.26 , HORVU2Hr1G000770.35 , HORVU2Hr1G000770.30 , HORVU2Hr1G000560.7 , HORVU2Hr1G000560.6 , HORVU2Hr1G000560.9 , HORVU2Hr1G000560.8
Wheat TraesCS2B02G019800 , TraesCS2A02G007000 , TraesCS7B02G495100 , TraesCS2B02G471100 , TraesCS2A02G003600 , TraesCS2B02G018200 , TraesCS5D02G419800 , TraesCSU02G064400 , TraesCS2A02G004900 , TraesCS4D02G006000 , TraesCS2A02G003100 , TraesCS2A02G003900 , TraesCS2D02G002400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
2 Sobic.002G117500 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
3 Sobic.001G038601 - -
4 Sobic.001G530900 expressed protein -
5 Sobic.002G033300 expressed protein -
6 Sobic.001G219700 pentatricopeptide, putative, expressed -
7 Sobic.002G118200 tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
8 Sobic.006G065600 expressed protein -
9 Sobic.004G181600 calmodulin binding protein, putative, expressed -
10 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
11 Sobic.007G192600 FACT complex subunit SPT16, putative, expressed -
12 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
13 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
14 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG
15 Sobic.006G133900 NIN, putative, expressed -
16 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
17 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
19 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
20 Sobic.004G070500 expressed protein -


Gene co-expression network
sample Sobic008G166400 Sobic008G166400 Sobic002G124600 Sobic002G124600 Sobic008G166400--Sobic002G124600 Sobic002G117500 Sobic002G117500 Sobic008G166400--Sobic002G117500 Sobic001G038601 Sobic001G038601 Sobic008G166400--Sobic001G038601 Sobic001G530900 Sobic001G530900 Sobic008G166400--Sobic001G530900 Sobic002G033300 Sobic002G033300 Sobic008G166400--Sobic002G033300 Sobic001G219700 Sobic001G219700 Sobic008G166400--Sobic001G219700 Sobic002G118200 Sobic002G118200 Sobic008G166400--Sobic002G118200 Sobic006G065600 Sobic006G065600 Sobic008G166400--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic008G166400--Sobic004G181600 Sobic006G219600 Sobic006G219600 Sobic002G124600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic002G124600--Sobic003G155100 Sobic001G375100 Sobic001G375100 Sobic002G124600--Sobic001G375100 Sobic006G133900 Sobic006G133900 Sobic002G124600--Sobic006G133900 Sobic008G001200 Sobic008G001200 Sobic002G124600--Sobic008G001200 Sobic001G298900 Sobic001G298900 Sobic002G124600--Sobic001G298900 Sobic008G130100 Sobic008G130100 Sobic002G124600--Sobic008G130100 Sobic004G174200 Sobic004G174200 Sobic002G124600--Sobic004G174200 Sobic004G356700 Sobic004G356700 Sobic002G124600--Sobic004G356700 Sobic003G220100 Sobic003G220100 Sobic002G117500--Sobic003G220100 Sobic002G117500--Sobic001G038601 Sobic002G117500--Sobic002G124600 Sobic001G378100 Sobic001G378100 Sobic002G117500--Sobic001G378100 Sobic006G065100 Sobic006G065100 Sobic002G117500--Sobic006G065100 Sobic002G117500--Sobic008G166400 Sobic002G117500--Sobic001G530900 Sobic002G117500--Sobic006G219600 Sobic002G117500--Sobic004G181600 Sobic001G038601--Sobic002G117500 Sobic001G038601--Sobic002G124600 Sobic001G038601--Sobic008G166400 Sobic007G095300 Sobic007G095300 Sobic001G038601--Sobic007G095300 Sobic002G097700 Sobic002G097700 Sobic001G038601--Sobic002G097700 Sobic010G153201 Sobic010G153201 Sobic001G038601--Sobic010G153201 Sobic003G203300 Sobic003G203300 Sobic001G038601--Sobic003G203300 Sobic003G409000 Sobic003G409000 Sobic001G038601--Sobic003G409000 Sobic005G118400 Sobic005G118400 Sobic001G038601--Sobic005G118400 Sobic010G002700 Sobic010G002700 Sobic001G530900--Sobic010G002700 Sobic009G215500 Sobic009G215500 Sobic001G530900--Sobic009G215500 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G465700 Sobic001G465700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic002G033300--Sobic008G001200 Sobic002G033300--Sobic003G155100 Sobic001G230000 Sobic001G230000 Sobic002G033300--Sobic001G230000 Sobic003G388100 Sobic003G388100 Sobic002G033300--Sobic003G388100 Sobic003G205200 Sobic003G205200 Sobic002G033300--Sobic003G205200 Sobic010G206900 Sobic010G206900 Sobic002G033300--Sobic010G206900 Sobic002G033300--Sobic001G298900 Sobic001G457800 Sobic001G457800 Sobic002G033300--Sobic001G457800 Sobic004G263600 Sobic004G263600 Sobic002G033300--Sobic004G263600 Sobic006G233700 Sobic006G233700 Sobic001G219700--Sobic006G233700 Sobic004G026500 Sobic004G026500 Sobic001G219700--Sobic004G026500 Sobic001G124100 Sobic001G124100 Sobic001G219700--Sobic001G124100 Sobic001G219700--Sobic003G203300 Sobic008G081900 Sobic008G081900 Sobic001G219700--Sobic008G081900 Sobic002G129400 Sobic002G129400 Sobic001G219700--Sobic002G129400 Sobic001G219700--Sobic005G084500 Sobic009G241200 Sobic009G241200 Sobic001G219700--Sobic009G241200 Sobic002G349100 Sobic002G349100 Sobic001G219700--Sobic002G349100 Sobic007G005400 Sobic007G005400 Sobic002G118200--Sobic007G005400 Sobic002G118200--Sobic005G084500 Sobic001G531500 Sobic001G531500 Sobic002G118200--Sobic001G531500 Sobic003G085100 Sobic003G085100 Sobic002G118200--Sobic003G085100 Sobic002G258600 Sobic002G258600 Sobic002G118200--Sobic002G258600 Sobic009G123900 Sobic009G123900 Sobic002G118200--Sobic009G123900 Sobic004G019800 Sobic004G019800 Sobic002G118200--Sobic004G019800 Sobic009G093100 Sobic009G093100 Sobic002G118200--Sobic009G093100 Sobic008G074000 Sobic008G074000 Sobic002G118200--Sobic008G074000 Sobic006G065600--Sobic004G181600 Sobic007G167100 Sobic007G167100 Sobic006G065600--Sobic007G167100 Sobic006G065600--Sobic006G133900 Sobic002G104100 Sobic002G104100 Sobic006G065600--Sobic002G104100 Sobic006G065600--Sobic008G130100 Sobic001G454500 Sobic001G454500 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic004G178500 Sobic004G178500 Sobic006G065600--Sobic004G178500 Sobic001G365900 Sobic001G365900 Sobic006G065600--Sobic001G365900 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic004G181600--Sobic006G219600 Sobic004G181600--Sobic003G155100 Sobic004G181600--Sobic004G178500
Octagon: transcription factors


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