Gene annotation
Transcriptome id Sobic.005G211600.1
Synonym Sb05g026410
Functional annotation zinc knuckle family protein, expressed
UniProt A0A1Z5RKK8
Pfam -
Panther DB PTHR33075 PTHR33075:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g28300.1 : zinc knuckle family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G178401 - -
2 Sobic.007G044700 speckle-type POZ protein B, putative, expressed -
3 Sobic.010G271901 - -
4 Sobic.006G024600 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
5 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.007G005900 expressed protein -
7 Sobic.006G036700 - -
8 Sobic.004G092350 - -
9 Sobic.003G080300 expressed protein -
10 Sobic.001G200000 disease resistance RPP13-like protein 1, putative, expressed -
11 Sobic.010G100300 SAM dependent carboxyl methyltransferase, putative, expressed -
12 Sobic.001G009000 expressed protein -
13 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
14 Sobic.005G221900 - -
15 Sobic.003G012400 flavin monooxygenase, putative, expressed -
16 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
17 Sobic.006G177900 - -
18 Sobic.004G125100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
19 Sobic.006G176000 expressed protein -
20 Sobic.004G117000 xa1, putative, expressed -


Gene co-expression network
sample Sobic005G211600 Sobic005G211600 Sobic010G178401 Sobic010G178401 Sobic005G211600--Sobic010G178401 Sobic007G044700 Sobic007G044700 Sobic005G211600--Sobic007G044700 Sobic010G271901 Sobic010G271901 Sobic005G211600--Sobic010G271901 Sobic006G024600 Sobic006G024600 Sobic005G211600--Sobic006G024600 Sobic002G077400 Sobic002G077400 Sobic005G211600--Sobic002G077400 Sobic007G005900 Sobic007G005900 Sobic005G211600--Sobic007G005900 Sobic006G036700 Sobic006G036700 Sobic005G211600--Sobic006G036700 Sobic004G092350 Sobic004G092350 Sobic005G211600--Sobic004G092350 Sobic003G080300 Sobic003G080300 Sobic005G211600--Sobic003G080300 Sobic010G178401--Sobic003G080300 Sobic010G178000 Sobic010G178000 Sobic010G178401--Sobic010G178000 Sobic010G178401--Sobic005G211600 Sobic010G100900 Sobic010G100900 Sobic010G178401--Sobic010G100900 Sobic007G016600 Sobic007G016600 Sobic010G178401--Sobic007G016600 Sobic010G207100 Sobic010G207100 Sobic010G178401--Sobic010G207100 Sobic004G223400 Sobic004G223400 Sobic010G178401--Sobic004G223400 Sobic006G177900 Sobic006G177900 Sobic010G178401--Sobic006G177900 Sobic009G259100 Sobic009G259100 Sobic010G178401--Sobic009G259100 Sobic007G044700--Sobic007G005900 Sobic001G445850 Sobic001G445850 Sobic007G044700--Sobic001G445850 Sobic006G176000 Sobic006G176000 Sobic007G044700--Sobic006G176000 Sobic007G044700--Sobic005G211600 Sobic010G271901--Sobic006G036700 Sobic010G271901--Sobic006G177900 Sobic010G271901--Sobic002G077400 Sobic010G145500 Sobic010G145500 Sobic010G271901--Sobic010G145500 Sobic010G271901--Sobic005G211600 Sobic005G093800 Sobic005G093800 Sobic010G271901--Sobic005G093800 Sobic001G268000 Sobic001G268000 Sobic010G271901--Sobic001G268000 Sobic003G190100 Sobic003G190100 Sobic010G271901--Sobic003G190100 Sobic004G053800 Sobic004G053800 Sobic010G271901--Sobic004G053800 Sobic010G225701 Sobic010G225701 Sobic006G024600--Sobic010G225701 Sobic007G006200 Sobic007G006200 Sobic006G024600--Sobic007G006200 Sobic006G024600--Sobic005G211600 Sobic001G200000 Sobic001G200000 Sobic006G024600--Sobic001G200000 Sobic006G024600--Sobic004G092350 Sobic002G161400 Sobic002G161400 Sobic006G024600--Sobic002G161400 Sobic010G230500 Sobic010G230500 Sobic006G024600--Sobic010G230500 Sobic003G012400 Sobic003G012400 Sobic006G024600--Sobic003G012400 Sobic006G024600--Sobic003G080300 Sobic002G077400--Sobic006G177900 Sobic001G009000 Sobic001G009000 Sobic002G077400--Sobic001G009000 Sobic002G077400--Sobic003G190100 Sobic002G077400--Sobic005G093800 Sobic007G149700 Sobic007G149700 Sobic002G077400--Sobic007G149700 Sobic002G077400--Sobic010G271901 Sobic002G173100 Sobic002G173100 Sobic002G077400--Sobic002G173100 Sobic001G250000 Sobic001G250000 Sobic002G077400--Sobic001G250000 Sobic002G077400--Sobic010G178401 Sobic005G206400 Sobic005G206400 Sobic007G005900--Sobic005G206400 Sobic007G005900--Sobic007G044700 Sobic007G005900--Sobic006G176000 Sobic005G223925 Sobic005G223925 Sobic007G005900--Sobic005G223925 Sobic005G223600 Sobic005G223600 Sobic007G005900--Sobic005G223600 Sobic005G221900 Sobic005G221900 Sobic007G005900--Sobic005G221900 Sobic007G005900--Sobic005G211600 Sobic003G435900 Sobic003G435900 Sobic007G005900--Sobic003G435900 Sobic002G027232 Sobic002G027232 Sobic007G005900--Sobic002G027232 Sobic006G035400 Sobic006G035400 Sobic006G036700--Sobic006G035400 Sobic003G227501 Sobic003G227501 Sobic006G036700--Sobic003G227501 Sobic006G036700--Sobic010G271901 Sobic006G036700--Sobic005G221900 Sobic010G024200 Sobic010G024200 Sobic006G036700--Sobic010G024200 Sobic004G154532 Sobic004G154532 Sobic006G036700--Sobic004G154532 Sobic005G205200 Sobic005G205200 Sobic006G036700--Sobic005G205200 Sobic010G060800 Sobic010G060800 Sobic006G036700--Sobic010G060800 Sobic006G036700--Sobic010G145500 Sobic002G137850 Sobic002G137850 Sobic004G092350--Sobic002G137850 Sobic006G037900 Sobic006G037900 Sobic004G092350--Sobic006G037900 Sobic004G124601 Sobic004G124601 Sobic004G092350--Sobic004G124601 Sobic004G117000 Sobic004G117000 Sobic004G092350--Sobic004G117000 Sobic002G171101 Sobic002G171101 Sobic004G092350--Sobic002G171101 Sobic004G092350--Sobic004G154532 Sobic010G100300 Sobic010G100300 Sobic004G092350--Sobic010G100300 Sobic004G296600 Sobic004G296600 Sobic004G092350--Sobic004G296600 Sobic002G119100 Sobic002G119100 Sobic004G092350--Sobic002G119100 Sobic004G344600 Sobic004G344600 Sobic003G080300--Sobic004G344600 Sobic009G246400 Sobic009G246400 Sobic003G080300--Sobic009G246400 Sobic003G080300--Sobic010G178401 Sobic005G208200 Sobic005G208200 Sobic003G080300--Sobic005G208200 Sobic003G080300--Sobic009G259100 Sobic003G080300--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G080300--Sobic001G112900 Sobic003G080300--Sobic004G223400 Sobic003G340300 Sobic003G340300 Sobic003G080300--Sobic003G340300
Octagon: transcription factors


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