Gene annotation
Transcriptome id Sobic.001G009000.1
Synonym
Functional annotation expressed protein
UniProt C5WS15
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g46050.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
3 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
4 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.002G244200 nucleolar GTP-binding protein 1, putative, expressed -
6 Sobic.009G248801 - -
7 Sobic.007G202300 expressed protein -
8 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
9 Sobic.004G086150 - -
10 Sobic.006G177900 - -
11 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
12 Sobic.010G125833 - -
13 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
15 Sobic.010G138800 phosphate transporter 1, putative, expressed -
16 Sobic.003G160100 - -
17 Sobic.003G409000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.007G095300 cbbY protein-related, putative, expressed -
19 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
20 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic001G009000 Sobic001G009000 Sobic002G077400 Sobic002G077400 Sobic001G009000--Sobic002G077400 Sobic007G133000 Sobic007G133000 Sobic001G009000--Sobic007G133000 Sobic003G190100 Sobic003G190100 Sobic001G009000--Sobic003G190100 Sobic007G149700 Sobic007G149700 Sobic001G009000--Sobic007G149700 Sobic002G244200 Sobic002G244200 Sobic001G009000--Sobic002G244200 Sobic009G248801 Sobic009G248801 Sobic001G009000--Sobic009G248801 Sobic007G202300 Sobic007G202300 Sobic001G009000--Sobic007G202300 Sobic008G157100 Sobic008G157100 Sobic001G009000--Sobic008G157100 Sobic004G086150 Sobic004G086150 Sobic001G009000--Sobic004G086150 Sobic006G177900 Sobic006G177900 Sobic002G077400--Sobic006G177900 Sobic002G077400--Sobic001G009000 Sobic002G077400--Sobic003G190100 Sobic005G093800 Sobic005G093800 Sobic002G077400--Sobic005G093800 Sobic002G077400--Sobic007G149700 Sobic010G271901 Sobic010G271901 Sobic002G077400--Sobic010G271901 Sobic002G173100 Sobic002G173100 Sobic002G077400--Sobic002G173100 Sobic001G250000 Sobic001G250000 Sobic002G077400--Sobic001G250000 Sobic010G178401 Sobic010G178401 Sobic002G077400--Sobic010G178401 Sobic010G231300 Sobic010G231300 Sobic007G133000--Sobic010G231300 Sobic001G217900 Sobic001G217900 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic010G125833 Sobic010G125833 Sobic007G133000--Sobic010G125833 Sobic005G068700 Sobic005G068700 Sobic007G133000--Sobic005G068700 Sobic001G540600 Sobic001G540600 Sobic007G133000--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic007G133000--Sobic002G206300 Sobic001G180200 Sobic001G180200 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400 Sobic003G190100--Sobic002G173100 Sobic003G190100--Sobic005G093800 Sobic003G190100--Sobic002G077400 Sobic003G190100--Sobic002G244200 Sobic004G271600 Sobic004G271600 Sobic003G190100--Sobic004G271600 Sobic007G185300 Sobic007G185300 Sobic003G190100--Sobic007G185300 Sobic003G190100--Sobic007G133000 Sobic003G190100--Sobic006G177900 Sobic005G179300 Sobic005G179300 Sobic003G190100--Sobic005G179300 Sobic004G089200 Sobic004G089200 Sobic007G149700--Sobic004G089200 Sobic007G149700--Sobic008G157100 Sobic006G025600 Sobic006G025600 Sobic007G149700--Sobic006G025600 Sobic007G149700--Sobic002G077400 Sobic002G044700 Sobic002G044700 Sobic007G149700--Sobic002G044700 Sobic007G149700--Sobic006G177900 Sobic007G149700--Sobic003G190100 Sobic001G126400 Sobic001G126400 Sobic007G149700--Sobic001G126400 Sobic007G149700--Sobic001G009000 Sobic002G244200--Sobic009G248801 Sobic005G095000 Sobic005G095000 Sobic002G244200--Sobic005G095000 Sobic008G166550 Sobic008G166550 Sobic002G244200--Sobic008G166550 Sobic007G090403 Sobic007G090403 Sobic002G244200--Sobic007G090403 Sobic002G244200--Sobic007G133000 Sobic003G160100 Sobic003G160100 Sobic002G244200--Sobic003G160100 Sobic002G244200--Sobic004G086150 Sobic002G244200--Sobic007G202300 Sobic003G416000 Sobic003G416000 Sobic002G244200--Sobic003G416000 Sobic009G248801--Sobic004G086150 Sobic009G248801--Sobic002G244200 Sobic009G248801--Sobic003G160100 Sobic009G248801--Sobic005G095000 Sobic009G248801--Sobic007G202300 Sobic005G133600 Sobic005G133600 Sobic009G248801--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic009G248801--Sobic008G101100 Sobic009G248801--Sobic007G090403 Sobic009G248801--Sobic008G166550 Sobic007G202300--Sobic008G166550 Sobic007G202300--Sobic002G244200 Sobic001G000300 Sobic001G000300 Sobic007G202300--Sobic001G000300 Sobic007G202300--Sobic009G248801 Sobic007G202300--Sobic008G101100 Sobic002G017500 Sobic002G017500 Sobic007G202300--Sobic002G017500 Sobic007G202300--Sobic003G416000 Sobic007G202300--Sobic005G093800 Sobic007G202300--Sobic007G185300 Sobic008G157100--Sobic004G089200 Sobic008G157100--Sobic007G149700 Sobic002G354600 Sobic002G354600 Sobic008G157100--Sobic002G354600 Sobic008G157100--Sobic006G025600 Sobic008G157100--Sobic003G190100 Sobic003G108900 Sobic003G108900 Sobic008G157100--Sobic003G108900 Sobic008G157100--Sobic002G044700 Sobic008G157100--Sobic002G173100 Sobic004G165900 Sobic004G165900 Sobic008G157100--Sobic004G165900 Sobic004G086150--Sobic009G248801 Sobic004G086150--Sobic003G160100 Sobic004G086150--Sobic002G244200 Sobic004G086150--Sobic005G095000 Sobic002G196600 Sobic002G196600 Sobic004G086150--Sobic002G196600 Sobic004G086150--Sobic005G068700 Sobic009G123900 Sobic009G123900 Sobic004G086150--Sobic009G123900 Sobic004G086150--Sobic007G090403 Sobic004G175400 Sobic004G175400 Sobic004G086150--Sobic004G175400
Octagon: transcription factors


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