Gene annotation
Transcriptome id Sobic.004G117000.1
Synonym Sb04g009750
Functional annotation xa1, putative, expressed
UniProt A0A1Z5RM42
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF538
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os02g16270.2 : xa1, putative, expressed
MaizeGDB (Corn) Zm00025a035752
Brachypodium KQK02097 , PNT60497
Barley HORVU7Hr1G121470.11 , HORVU7Hr1G121470.12 , HORVU7Hr1G121470.13 , HORVU7Hr1G121470.2 , HORVU7Hr1G121470.3 , HORVU7Hr1G121470.1 , HORVU7Hr1G121470.6 , HORVU7Hr1G121470.7 , HORVU7Hr1G121470.4 , HORVU7Hr1G121470.5 , HORVU7Hr1G121470.8 , HORVU7Hr1G121470.9
Wheat TraesCS6D02G396600 , TraesCS6B02G461900 , TraesCS6D02G396700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092350 - -
2 Sobic.010G100300 SAM dependent carboxyl methyltransferase, putative, expressed -
3 Sobic.008G166400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.002G117500 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
5 Sobic.001G528800 cell cycle control protein, putative, expressed -
6 Sobic.006G037900 - -
7 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
8 Sobic.004G267800 nmrA-like family domain containing protein, expressed -
9 Sobic.004G296600 ribosome biogenesis protein NEP1, putative, expressed K14568: EMG1, rRNA small subunit pseudouridine methyltransferase Nep1
10 Sobic.004G284001 - -
11 Sobic.007G227100 expressed protein -
12 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G143300 high mobility group, putative, expressed -
14 Sobic.004G124601 - -
15 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
16 Sobic.006G234601 - -
17 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
18 Sobic.007G192600 FACT complex subunit SPT16, putative, expressed -
19 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
20 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic004G117000 Sobic004G117000 Sobic004G092350 Sobic004G092350 Sobic004G117000--Sobic004G092350 Sobic010G100300 Sobic010G100300 Sobic004G117000--Sobic010G100300 Sobic008G166400 Sobic008G166400 Sobic004G117000--Sobic008G166400 Sobic002G117500 Sobic002G117500 Sobic004G117000--Sobic002G117500 Sobic001G528800 Sobic001G528800 Sobic004G117000--Sobic001G528800 Sobic006G037900 Sobic006G037900 Sobic004G117000--Sobic006G037900 Sobic010G125500 Sobic010G125500 Sobic004G117000--Sobic010G125500 Sobic004G267800 Sobic004G267800 Sobic004G117000--Sobic004G267800 Sobic004G296600 Sobic004G296600 Sobic004G117000--Sobic004G296600 Sobic002G137850 Sobic002G137850 Sobic004G092350--Sobic002G137850 Sobic004G092350--Sobic006G037900 Sobic004G124601 Sobic004G124601 Sobic004G092350--Sobic004G124601 Sobic004G092350--Sobic004G117000 Sobic002G171101 Sobic002G171101 Sobic004G092350--Sobic002G171101 Sobic004G154532 Sobic004G154532 Sobic004G092350--Sobic004G154532 Sobic004G092350--Sobic010G100300 Sobic004G092350--Sobic004G296600 Sobic002G119100 Sobic002G119100 Sobic004G092350--Sobic002G119100 Sobic003G097600 Sobic003G097600 Sobic010G100300--Sobic003G097600 Sobic010G104800 Sobic010G104800 Sobic010G100300--Sobic010G104800 Sobic007G006400 Sobic007G006400 Sobic010G100300--Sobic007G006400 Sobic010G100300--Sobic004G092350 Sobic004G284001 Sobic004G284001 Sobic010G100300--Sobic004G284001 Sobic008G129900 Sobic008G129900 Sobic010G100300--Sobic008G129900 Sobic010G100300--Sobic002G137850 Sobic003G012400 Sobic003G012400 Sobic010G100300--Sobic003G012400 Sobic001G200000 Sobic001G200000 Sobic010G100300--Sobic001G200000 Sobic002G124600 Sobic002G124600 Sobic008G166400--Sobic002G124600 Sobic008G166400--Sobic002G117500 Sobic001G038601 Sobic001G038601 Sobic008G166400--Sobic001G038601 Sobic001G530900 Sobic001G530900 Sobic008G166400--Sobic001G530900 Sobic002G033300 Sobic002G033300 Sobic008G166400--Sobic002G033300 Sobic001G219700 Sobic001G219700 Sobic008G166400--Sobic001G219700 Sobic002G118200 Sobic002G118200 Sobic008G166400--Sobic002G118200 Sobic006G065600 Sobic006G065600 Sobic008G166400--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic008G166400--Sobic004G181600 Sobic003G220100 Sobic003G220100 Sobic002G117500--Sobic003G220100 Sobic002G117500--Sobic001G038601 Sobic002G117500--Sobic002G124600 Sobic001G378100 Sobic001G378100 Sobic002G117500--Sobic001G378100 Sobic006G065100 Sobic006G065100 Sobic002G117500--Sobic006G065100 Sobic002G117500--Sobic008G166400 Sobic002G117500--Sobic001G530900 Sobic006G219600 Sobic006G219600 Sobic002G117500--Sobic006G219600 Sobic002G117500--Sobic004G181600 Sobic004G069000 Sobic004G069000 Sobic001G528800--Sobic004G069000 Sobic001G198400 Sobic001G198400 Sobic001G528800--Sobic001G198400 Sobic001G528800--Sobic001G378100 Sobic001G528800--Sobic001G530900 Sobic010G002700 Sobic010G002700 Sobic001G528800--Sobic010G002700 Sobic001G345100 Sobic001G345100 Sobic001G528800--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic001G528800--Sobic004G143300 Sobic008G033000 Sobic008G033000 Sobic001G528800--Sobic008G033000 Sobic004G042200 Sobic004G042200 Sobic001G528800--Sobic004G042200 Sobic006G037900--Sobic004G284001 Sobic007G095300 Sobic007G095300 Sobic006G037900--Sobic007G095300 Sobic006G037900--Sobic004G092350 Sobic002G027232 Sobic002G027232 Sobic006G037900--Sobic002G027232 Sobic003G180600 Sobic003G180600 Sobic006G037900--Sobic003G180600 Sobic006G037900--Sobic002G117500 Sobic006G037900--Sobic002G137850 Sobic005G077200 Sobic005G077200 Sobic006G037900--Sobic005G077200 Sobic006G176000 Sobic006G176000 Sobic006G037900--Sobic006G176000 Sobic001G136800 Sobic001G136800 Sobic010G125500--Sobic001G136800 Sobic004G356700 Sobic004G356700 Sobic010G125500--Sobic004G356700 Sobic004G244900 Sobic004G244900 Sobic010G125500--Sobic004G244900 Sobic010G125500--Sobic006G219600 Sobic006G259800 Sobic006G259800 Sobic010G125500--Sobic006G259800 Sobic003G155100 Sobic003G155100 Sobic010G125500--Sobic003G155100 Sobic010G125500--Sobic001G530900 Sobic001G457800 Sobic001G457800 Sobic010G125500--Sobic001G457800 Sobic009G135000 Sobic009G135000 Sobic010G125500--Sobic009G135000 Sobic004G267800--Sobic004G356700 Sobic004G267800--Sobic010G125500 Sobic008G044100 Sobic008G044100 Sobic004G267800--Sobic008G044100 Sobic008G130100 Sobic008G130100 Sobic004G267800--Sobic008G130100 Sobic003G398700 Sobic003G398700 Sobic004G267800--Sobic003G398700 Sobic004G267800--Sobic003G155100 Sobic004G134200 Sobic004G134200 Sobic004G267800--Sobic004G134200 Sobic003G340600 Sobic003G340600 Sobic004G267800--Sobic003G340600 Sobic007G136800 Sobic007G136800 Sobic004G267800--Sobic007G136800 Sobic003G073800 Sobic003G073800 Sobic004G296600--Sobic003G073800 Sobic004G296600--Sobic001G378100 Sobic007G227100 Sobic007G227100 Sobic004G296600--Sobic007G227100 Sobic004G127800 Sobic004G127800 Sobic004G296600--Sobic004G127800 Sobic004G296600--Sobic004G092350 Sobic004G296600--Sobic003G012400 Sobic001G263100 Sobic001G263100 Sobic004G296600--Sobic001G263100 Sobic001G077300 Sobic001G077300 Sobic004G296600--Sobic001G077300 Sobic006G161500 Sobic006G161500 Sobic004G296600--Sobic006G161500
Octagon: transcription factors


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