Gene annotation
Transcriptome id Sobic.004G267800.1
Synonym Sb04g030570
Functional annotation nmrA-like family domain containing protein, expressed
UniProt C5Y0B8
Pfam PF05368
Panther DB PTHR10366 PTHR10366:SF254
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34540 : NmrA-like negative transcriptional regulator family protein
RAP-DB (Rice) LOC_Os02g47610.1 : nmrA-like family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021717
Brachypodium -
Barley HORVU6Hr1G068850.4
Wheat TraesCS6A02G272600 , TraesCS6D02G252600 , TraesCS6B02G300100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
2 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
3 Sobic.008G044100 expressed protein -
4 Sobic.008G130100 protein kinase family protein, putative, expressed -
5 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
6 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
7 Sobic.004G134200 GTP binding protein, putative, expressed -
8 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
9 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
10 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
11 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
12 Sobic.004G136200 - -
13 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
14 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
15 Sobic.010G010700 PHD-finger family protein, expressed -
16 Sobic.009G092020 - -
17 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
18 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
19 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
20 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase


Gene co-expression network
sample Sobic004G267800 Sobic004G267800 Sobic004G356700 Sobic004G356700 Sobic004G267800--Sobic004G356700 Sobic010G125500 Sobic010G125500 Sobic004G267800--Sobic010G125500 Sobic008G044100 Sobic008G044100 Sobic004G267800--Sobic008G044100 Sobic008G130100 Sobic008G130100 Sobic004G267800--Sobic008G130100 Sobic003G398700 Sobic003G398700 Sobic004G267800--Sobic003G398700 Sobic003G155100 Sobic003G155100 Sobic004G267800--Sobic003G155100 Sobic004G134200 Sobic004G134200 Sobic004G267800--Sobic004G134200 Sobic003G340600 Sobic003G340600 Sobic004G267800--Sobic003G340600 Sobic007G136800 Sobic007G136800 Sobic004G267800--Sobic007G136800 Sobic008G001200 Sobic008G001200 Sobic004G356700--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic004G356700--Sobic001G194200 Sobic002G146300 Sobic002G146300 Sobic004G356700--Sobic002G146300 Sobic004G001500 Sobic004G001500 Sobic004G356700--Sobic004G001500 Sobic009G256400 Sobic009G256400 Sobic004G356700--Sobic009G256400 Sobic004G244900 Sobic004G244900 Sobic004G356700--Sobic004G244900 Sobic004G356700--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic004G356700--Sobic006G219600 Sobic004G334300 Sobic004G334300 Sobic004G356700--Sobic004G334300 Sobic001G136800 Sobic001G136800 Sobic010G125500--Sobic001G136800 Sobic010G125500--Sobic004G356700 Sobic010G125500--Sobic004G244900 Sobic010G125500--Sobic006G219600 Sobic006G259800 Sobic006G259800 Sobic010G125500--Sobic006G259800 Sobic010G125500--Sobic003G155100 Sobic001G530900 Sobic001G530900 Sobic010G125500--Sobic001G530900 Sobic001G457800 Sobic001G457800 Sobic010G125500--Sobic001G457800 Sobic009G135000 Sobic009G135000 Sobic010G125500--Sobic009G135000 Sobic010G010700 Sobic010G010700 Sobic008G044100--Sobic010G010700 Sobic008G044100--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic008G044100--Sobic001G374100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic001G365900 Sobic001G365900 Sobic008G130100--Sobic001G365900 Sobic001G454500 Sobic001G454500 Sobic008G130100--Sobic001G454500 Sobic006G133900 Sobic006G133900 Sobic008G130100--Sobic006G133900 Sobic008G130100--Sobic010G010700 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic001G456900 Sobic001G456900 Sobic003G398700--Sobic001G456900 Sobic003G398700--Sobic008G044100 Sobic010G021500 Sobic010G021500 Sobic003G398700--Sobic010G021500 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic008G113100 Sobic008G113100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic004G134200--Sobic008G044100 Sobic004G134200--Sobic001G374100 Sobic009G256300 Sobic009G256300 Sobic004G134200--Sobic009G256300 Sobic004G134200--Sobic010G010700 Sobic009G215500 Sobic009G215500 Sobic004G134200--Sobic009G215500 Sobic004G134200--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic004G134200--Sobic004G276400 Sobic003G011300 Sobic003G011300 Sobic004G134200--Sobic003G011300 Sobic001G172700 Sobic001G172700 Sobic004G134200--Sobic001G172700 Sobic008G172300 Sobic008G172300 Sobic003G340600--Sobic008G172300 Sobic003G221900 Sobic003G221900 Sobic003G340600--Sobic003G221900 Sobic002G167500 Sobic002G167500 Sobic003G340600--Sobic002G167500 Sobic010G092300 Sobic010G092300 Sobic003G340600--Sobic010G092300 Sobic003G340600--Sobic003G398700 Sobic009G162600 Sobic009G162600 Sobic003G340600--Sobic009G162600 Sobic004G181600 Sobic004G181600 Sobic003G340600--Sobic004G181600 Sobic010G013200 Sobic010G013200 Sobic003G340600--Sobic010G013200 Sobic006G086500 Sobic006G086500 Sobic003G340600--Sobic006G086500 Sobic007G136800--Sobic003G398700 Sobic007G136800--Sobic010G126000 Sobic007G136800--Sobic003G168100 Sobic001G375700 Sobic001G375700 Sobic007G136800--Sobic001G375700 Sobic006G031800 Sobic006G031800 Sobic007G136800--Sobic006G031800 Sobic005G100600 Sobic005G100600 Sobic007G136800--Sobic005G100600 Sobic001G043800 Sobic001G043800 Sobic007G136800--Sobic001G043800 Sobic007G136800--Sobic003G011300 Sobic010G032900 Sobic010G032900 Sobic007G136800--Sobic010G032900
Octagon: transcription factors


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