Gene annotation
Transcriptome id Sobic.010G100300.4,Sobic.010G100300.2,Sobic.010G100300.3,Sobic.010G100300.1
Synonym JMT, Sb10g008730
Functional annotation SAM dependent carboxyl methyltransferase, putative, expressed
UniProt A0A1W0VSC8 , A0A1W0VSC0 , C5Z7J9
Pfam PF03492
Panther DB PTHR31009 PTHR31009:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G04370 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g13350.1,LOC_Os06g13390.1 : SAM dependent carboxyl methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a049407 , Zm00025a018934 , Zm00025a049408 , Zm00025a049409
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G097600 - -
2 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
3 Sobic.007G006400 - -
4 Sobic.004G092350 - -
5 Sobic.004G284001 - -
6 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G137850 - -
8 Sobic.003G012400 flavin monooxygenase, putative, expressed -
9 Sobic.001G200000 disease resistance RPP13-like protein 1, putative, expressed -
10 Sobic.006G057866 - K12129: pseudo-response regulator 7
11 Sobic.003G154300 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
13 Sobic.004G296600 ribosome biogenesis protein NEP1, putative, expressed K14568: EMG1, rRNA small subunit pseudouridine methyltransferase Nep1
14 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.004G117000 xa1, putative, expressed -
16 Sobic.004G143300 high mobility group, putative, expressed -
17 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
18 Sobic.003G409700 rieske domain containing protein, expressed -
19 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
20 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase


Gene co-expression network
sample Sobic010G100300 Sobic010G100300 Sobic003G097600 Sobic003G097600 Sobic010G100300--Sobic003G097600 Sobic010G104800 Sobic010G104800 Sobic010G100300--Sobic010G104800 Sobic007G006400 Sobic007G006400 Sobic010G100300--Sobic007G006400 Sobic004G092350 Sobic004G092350 Sobic010G100300--Sobic004G092350 Sobic004G284001 Sobic004G284001 Sobic010G100300--Sobic004G284001 Sobic008G129900 Sobic008G129900 Sobic010G100300--Sobic008G129900 Sobic002G137850 Sobic002G137850 Sobic010G100300--Sobic002G137850 Sobic003G012400 Sobic003G012400 Sobic010G100300--Sobic003G012400 Sobic001G200000 Sobic001G200000 Sobic010G100300--Sobic001G200000 Sobic003G097600--Sobic008G129900 Sobic003G097600--Sobic007G006400 Sobic004G215800 Sobic004G215800 Sobic003G097600--Sobic004G215800 Sobic003G185900 Sobic003G185900 Sobic003G097600--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic003G097600--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic003G097600--Sobic004G112100 Sobic004G082300 Sobic004G082300 Sobic003G097600--Sobic004G082300 Sobic009G038701 Sobic009G038701 Sobic003G097600--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic003G097600--Sobic001G258200 Sobic001G073300 Sobic001G073300 Sobic010G104800--Sobic001G073300 Sobic006G153400 Sobic006G153400 Sobic010G104800--Sobic006G153400 Sobic009G256100 Sobic009G256100 Sobic010G104800--Sobic009G256100 Sobic010G104800--Sobic007G006400 Sobic010G104800--Sobic008G129900 Sobic010G104800--Sobic004G112100 Sobic001G244600 Sobic001G244600 Sobic010G104800--Sobic001G244600 Sobic006G161500 Sobic006G161500 Sobic010G104800--Sobic006G161500 Sobic002G390100 Sobic002G390100 Sobic010G104800--Sobic002G390100 Sobic007G006400--Sobic003G097600 Sobic007G006400--Sobic010G104800 Sobic007G006400--Sobic006G153400 Sobic007G006400--Sobic008G129900 Sobic007G006400--Sobic004G112100 Sobic007G006400--Sobic004G082300 Sobic007G006400--Sobic009G256100 Sobic004G059800 Sobic004G059800 Sobic007G006400--Sobic004G059800 Sobic003G127800 Sobic003G127800 Sobic007G006400--Sobic003G127800 Sobic004G092350--Sobic002G137850 Sobic006G037900 Sobic006G037900 Sobic004G092350--Sobic006G037900 Sobic004G124601 Sobic004G124601 Sobic004G092350--Sobic004G124601 Sobic004G117000 Sobic004G117000 Sobic004G092350--Sobic004G117000 Sobic002G171101 Sobic002G171101 Sobic004G092350--Sobic002G171101 Sobic004G154532 Sobic004G154532 Sobic004G092350--Sobic004G154532 Sobic004G092350--Sobic010G100300 Sobic004G296600 Sobic004G296600 Sobic004G092350--Sobic004G296600 Sobic002G119100 Sobic002G119100 Sobic004G092350--Sobic002G119100 Sobic007G095300 Sobic007G095300 Sobic004G284001--Sobic007G095300 Sobic004G284001--Sobic006G037900 Sobic004G284001--Sobic002G137850 Sobic004G284001--Sobic010G100300 Sobic002G190300 Sobic002G190300 Sobic004G284001--Sobic002G190300 Sobic002G117500 Sobic002G117500 Sobic004G284001--Sobic002G117500 Sobic003G180600 Sobic003G180600 Sobic004G284001--Sobic003G180600 Sobic002G056500 Sobic002G056500 Sobic004G284001--Sobic002G056500 Sobic005G077300 Sobic005G077300 Sobic004G284001--Sobic005G077300 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300 Sobic002G137850--Sobic002G119100 Sobic004G322600 Sobic004G322600 Sobic002G137850--Sobic004G322600 Sobic002G137850--Sobic004G092350 Sobic002G137850--Sobic010G231300 Sobic002G137850--Sobic006G161500 Sobic004G035100 Sobic004G035100 Sobic002G137850--Sobic004G035100 Sobic003G314000 Sobic003G314000 Sobic002G137850--Sobic003G314000 Sobic009G194500 Sobic009G194500 Sobic002G137850--Sobic009G194500 Sobic002G137850--Sobic002G171101 Sobic004G128900 Sobic004G128900 Sobic003G012400--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic003G012400--Sobic004G153900 Sobic002G161400 Sobic002G161400 Sobic003G012400--Sobic002G161400 Sobic003G012400--Sobic006G161500 Sobic003G012400--Sobic001G263100 Sobic003G012400--Sobic004G035100 Sobic003G012400--Sobic006G235400 Sobic009G246400 Sobic009G246400 Sobic003G012400--Sobic009G246400 Sobic001G331600 Sobic001G331600 Sobic003G012400--Sobic001G331600 Sobic010G104700 Sobic010G104700 Sobic001G200000--Sobic010G104700 Sobic001G200000--Sobic007G006400 Sobic010G101000 Sobic010G101000 Sobic001G200000--Sobic010G101000 Sobic008G180800 Sobic008G180800 Sobic001G200000--Sobic008G180800 Sobic009G225600 Sobic009G225600 Sobic001G200000--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic001G200000--Sobic008G149100 Sobic001G200000--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic001G200000--Sobic001G046000 Sobic003G304300 Sobic003G304300 Sobic001G200000--Sobic003G304300
Octagon: transcription factors


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