Gene annotation
Transcriptome id Sobic.001G363900.1
Synonym
Functional annotation -
UniProt A0A1B6QN38
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G053800 - -
2 Sobic.001G268000 - -
3 Sobic.001G186300 sec20 domain containing protein, expressed K08497: protein transport protein SEC20
4 Sobic.002G059932 - -
5 Sobic.010G145500 expressed protein -
6 Sobic.010G271901 - -
7 Sobic.002G048100 serpin domain containing protein, putative, expressed K13963: serpin B
8 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -
9 Sobic.003G069875 - -
10 Sobic.009G147300 expressed protein -
11 Sobic.001G233300 - -
12 Sobic.003G069950 - -
13 Sobic.010G240100 - -
14 Sobic.001G459600 expressed protein -
15 Sobic.006G035400 - -
16 Sobic.009G130000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
17 Sobic.001G223550 - -
18 Sobic.006G036566 - -
19 Sobic.003G291200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
20 Sobic.001G542150 - -


Gene co-expression network
sample Sobic001G363900 Sobic001G363900 Sobic004G053800 Sobic004G053800 Sobic001G363900--Sobic004G053800 Sobic001G268000 Sobic001G268000 Sobic001G363900--Sobic001G268000 Sobic001G186300 Sobic001G186300 Sobic001G363900--Sobic001G186300 Sobic002G059932 Sobic002G059932 Sobic001G363900--Sobic002G059932 Sobic010G145500 Sobic010G145500 Sobic001G363900--Sobic010G145500 Sobic010G271901 Sobic010G271901 Sobic001G363900--Sobic010G271901 Sobic002G048100 Sobic002G048100 Sobic001G363900--Sobic002G048100 Sobic005G156400 Sobic005G156400 Sobic001G363900--Sobic005G156400 Sobic003G069875 Sobic003G069875 Sobic001G363900--Sobic003G069875 Sobic004G053800--Sobic001G363900 Sobic004G053800--Sobic001G186300 Sobic004G053800--Sobic001G268000 Sobic004G053800--Sobic010G271901 Sobic004G053800--Sobic010G145500 Sobic004G053800--Sobic002G059932 Sobic008G157500 Sobic008G157500 Sobic004G053800--Sobic008G157500 Sobic009G147300 Sobic009G147300 Sobic004G053800--Sobic009G147300 Sobic002G033300 Sobic002G033300 Sobic004G053800--Sobic002G033300 Sobic001G268000--Sobic001G186300 Sobic001G268000--Sobic004G053800 Sobic001G268000--Sobic001G363900 Sobic001G268000--Sobic010G271901 Sobic006G035400 Sobic006G035400 Sobic001G268000--Sobic006G035400 Sobic001G268000--Sobic002G048100 Sobic006G036700 Sobic006G036700 Sobic001G268000--Sobic006G036700 Sobic001G268000--Sobic010G145500 Sobic001G233300 Sobic001G233300 Sobic001G268000--Sobic001G233300 Sobic001G186300--Sobic004G053800 Sobic001G186300--Sobic001G268000 Sobic001G186300--Sobic001G363900 Sobic001G186300--Sobic010G271901 Sobic001G186300--Sobic010G145500 Sobic008G148300 Sobic008G148300 Sobic001G186300--Sobic008G148300 Sobic004G284001 Sobic004G284001 Sobic001G186300--Sobic004G284001 Sobic008G166400 Sobic008G166400 Sobic001G186300--Sobic008G166400 Sobic001G186300--Sobic001G233300 Sobic002G059932--Sobic005G156400 Sobic002G190200 Sobic002G190200 Sobic002G059932--Sobic002G190200 Sobic009G130000 Sobic009G130000 Sobic002G059932--Sobic009G130000 Sobic002G044700 Sobic002G044700 Sobic002G059932--Sobic002G044700 Sobic002G071350 Sobic002G071350 Sobic002G059932--Sobic002G071350 Sobic002G059932--Sobic001G363900 Sobic001G223550 Sobic001G223550 Sobic010G145500--Sobic001G223550 Sobic010G145500--Sobic001G233300 Sobic005G089400 Sobic005G089400 Sobic010G145500--Sobic005G089400 Sobic010G145500--Sobic010G271901 Sobic008G101100 Sobic008G101100 Sobic010G145500--Sobic008G101100 Sobic010G121200 Sobic010G121200 Sobic010G145500--Sobic010G121200 Sobic001G459600 Sobic001G459600 Sobic010G145500--Sobic001G459600 Sobic003G160100 Sobic003G160100 Sobic010G145500--Sobic003G160100 Sobic001G517800 Sobic001G517800 Sobic010G145500--Sobic001G517800 Sobic010G271901--Sobic006G036700 Sobic006G177900 Sobic006G177900 Sobic010G271901--Sobic006G177900 Sobic002G077400 Sobic002G077400 Sobic010G271901--Sobic002G077400 Sobic010G271901--Sobic010G145500 Sobic005G211600 Sobic005G211600 Sobic010G271901--Sobic005G211600 Sobic005G093800 Sobic005G093800 Sobic010G271901--Sobic005G093800 Sobic010G271901--Sobic001G268000 Sobic003G190100 Sobic003G190100 Sobic010G271901--Sobic003G190100 Sobic010G271901--Sobic004G053800 Sobic002G048100--Sobic001G268000 Sobic002G048100--Sobic006G035400 Sobic002G048100--Sobic001G233300 Sobic002G048100--Sobic001G363900 Sobic006G226400 Sobic006G226400 Sobic002G048100--Sobic006G226400 Sobic002G420700 Sobic002G420700 Sobic002G048100--Sobic002G420700 Sobic002G048100--Sobic010G145500 Sobic001G542150 Sobic001G542150 Sobic002G048100--Sobic001G542150 Sobic003G139366 Sobic003G139366 Sobic002G048100--Sobic003G139366 Sobic005G156400--Sobic002G059932 Sobic005G156400--Sobic005G093800 Sobic005G156400--Sobic009G130000 Sobic005G156400--Sobic002G044700 Sobic001G227900 Sobic001G227900 Sobic005G156400--Sobic001G227900 Sobic005G156400--Sobic003G190100 Sobic005G156400--Sobic006G177900 Sobic003G129600 Sobic003G129600 Sobic005G156400--Sobic003G129600 Sobic006G276100 Sobic006G276100 Sobic005G156400--Sobic006G276100 Sobic003G069950 Sobic003G069950 Sobic003G069875--Sobic003G069950 Sobic006G061900 Sobic006G061900 Sobic003G069875--Sobic006G061900 Sobic003G069875--Sobic001G459600 Sobic008G007400 Sobic008G007400 Sobic003G069875--Sobic008G007400 Sobic001G333300 Sobic001G333300 Sobic003G069875--Sobic001G333300 Sobic004G113000 Sobic004G113000 Sobic003G069875--Sobic004G113000 Sobic001G248200 Sobic001G248200 Sobic003G069875--Sobic001G248200 Sobic003G069875--Sobic002G059932 Sobic003G069875--Sobic009G147300
Octagon: transcription factors


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