Gene annotation
Transcriptome id Sobic.002G048100.1
Synonym Sb02g004040
Functional annotation serpin domain containing protein, putative, expressed
UniProt C5XAD7
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF179
NCBI CDD KOG2392; Serpin
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os05g43590.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G268000 - -
2 Sobic.006G035400 - -
3 Sobic.001G233300 - -
4 Sobic.001G363900 - -
5 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
6 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
7 Sobic.010G145500 expressed protein -
8 Sobic.001G542150 - -
9 Sobic.003G139366 - -
10 Sobic.001G468100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G143766 - -
12 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
13 Sobic.007G201600 - -
14 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
15 Sobic.007G163901 - -
16 Sobic.010G135900 - -
17 Sobic.001G176501 - -
18 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
19 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
20 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase


Gene co-expression network
sample Sobic002G048100 Sobic002G048100 Sobic001G268000 Sobic001G268000 Sobic002G048100--Sobic001G268000 Sobic006G035400 Sobic006G035400 Sobic002G048100--Sobic006G035400 Sobic001G233300 Sobic001G233300 Sobic002G048100--Sobic001G233300 Sobic001G363900 Sobic001G363900 Sobic002G048100--Sobic001G363900 Sobic006G226400 Sobic006G226400 Sobic002G048100--Sobic006G226400 Sobic002G420700 Sobic002G420700 Sobic002G048100--Sobic002G420700 Sobic010G145500 Sobic010G145500 Sobic002G048100--Sobic010G145500 Sobic001G542150 Sobic001G542150 Sobic002G048100--Sobic001G542150 Sobic003G139366 Sobic003G139366 Sobic002G048100--Sobic003G139366 Sobic001G186300 Sobic001G186300 Sobic001G268000--Sobic001G186300 Sobic004G053800 Sobic004G053800 Sobic001G268000--Sobic004G053800 Sobic001G268000--Sobic001G363900 Sobic010G271901 Sobic010G271901 Sobic001G268000--Sobic010G271901 Sobic001G268000--Sobic006G035400 Sobic001G268000--Sobic002G048100 Sobic006G036700 Sobic006G036700 Sobic001G268000--Sobic006G036700 Sobic001G268000--Sobic010G145500 Sobic001G268000--Sobic001G233300 Sobic006G035400--Sobic006G036700 Sobic004G161501 Sobic004G161501 Sobic006G035400--Sobic004G161501 Sobic010G060800 Sobic010G060800 Sobic006G035400--Sobic010G060800 Sobic003G227501 Sobic003G227501 Sobic006G035400--Sobic003G227501 Sobic010G024200 Sobic010G024200 Sobic006G035400--Sobic010G024200 Sobic002G153200 Sobic002G153200 Sobic006G035400--Sobic002G153200 Sobic006G035400--Sobic010G145500 Sobic006G035400--Sobic001G268000 Sobic006G035400--Sobic010G271901 Sobic001G233300--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G233300--Sobic002G143766 Sobic001G223550 Sobic001G223550 Sobic001G233300--Sobic001G223550 Sobic002G249300 Sobic002G249300 Sobic001G233300--Sobic002G249300 Sobic001G233300--Sobic001G542150 Sobic001G233300--Sobic010G145500 Sobic004G034600 Sobic004G034600 Sobic001G233300--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic001G233300--Sobic005G149700 Sobic001G000501 Sobic001G000501 Sobic001G233300--Sobic001G000501 Sobic001G363900--Sobic004G053800 Sobic001G363900--Sobic001G268000 Sobic001G363900--Sobic001G186300 Sobic002G059932 Sobic002G059932 Sobic001G363900--Sobic002G059932 Sobic001G363900--Sobic010G145500 Sobic001G363900--Sobic010G271901 Sobic001G363900--Sobic002G048100 Sobic005G156400 Sobic005G156400 Sobic001G363900--Sobic005G156400 Sobic003G069875 Sobic003G069875 Sobic001G363900--Sobic003G069875 Sobic004G320600 Sobic004G320600 Sobic006G226400--Sobic004G320600 Sobic003G087200 Sobic003G087200 Sobic006G226400--Sobic003G087200 Sobic009G114000 Sobic009G114000 Sobic006G226400--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic006G226400--Sobic001G150600 Sobic007G092900 Sobic007G092900 Sobic006G226400--Sobic007G092900 Sobic006G091700 Sobic006G091700 Sobic006G226400--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G226400--Sobic004G321800 Sobic007G093000 Sobic007G093000 Sobic006G226400--Sobic007G093000 Sobic006G226400--Sobic002G420700 Sobic005G178100 Sobic005G178100 Sobic002G420700--Sobic005G178100 Sobic007G035000 Sobic007G035000 Sobic002G420700--Sobic007G035000 Sobic008G153400 Sobic008G153400 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic002G420700--Sobic001G150600 Sobic002G420700--Sobic006G091700 Sobic002G420700--Sobic006G226400 Sobic001G015500 Sobic001G015500 Sobic002G420700--Sobic001G015500 Sobic010G145500--Sobic001G223550 Sobic010G145500--Sobic001G233300 Sobic005G089400 Sobic005G089400 Sobic010G145500--Sobic005G089400 Sobic010G145500--Sobic010G271901 Sobic008G101100 Sobic008G101100 Sobic010G145500--Sobic008G101100 Sobic010G121200 Sobic010G121200 Sobic010G145500--Sobic010G121200 Sobic001G459600 Sobic001G459600 Sobic010G145500--Sobic001G459600 Sobic003G160100 Sobic003G160100 Sobic010G145500--Sobic003G160100 Sobic001G517800 Sobic001G517800 Sobic010G145500--Sobic001G517800 Sobic001G542150--Sobic001G233300 Sobic001G542150--Sobic002G153200 Sobic001G542150--Sobic002G143766 Sobic009G007200 Sobic009G007200 Sobic001G542150--Sobic009G007200 Sobic001G176501 Sobic001G176501 Sobic001G542150--Sobic001G176501 Sobic003G174400 Sobic003G174400 Sobic001G542150--Sobic003G174400 Sobic001G542150--Sobic002G249300 Sobic004G057500 Sobic004G057500 Sobic001G542150--Sobic004G057500 Sobic005G150400 Sobic005G150400 Sobic001G542150--Sobic005G150400 Sobic003G139366--Sobic001G176501 Sobic010G135900 Sobic010G135900 Sobic003G139366--Sobic010G135900 Sobic010G187000 Sobic010G187000 Sobic003G139366--Sobic010G187000 Sobic003G139366--Sobic002G048100 Sobic003G139366--Sobic001G233300 Sobic003G139366--Sobic003G174400 Sobic003G139366--Sobic001G542150 Sobic003G139366--Sobic002G249300 Sobic003G174301 Sobic003G174301 Sobic003G139366--Sobic003G174301
Octagon: transcription factors


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