Gene annotation
Transcriptome id Sobic.003G139366.1
Synonym -
Functional annotation -
UniProt A0A1W0VXA5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a013754
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G176501 - -
2 Sobic.010G135900 - -
3 Sobic.010G187000 - -
4 Sobic.002G048100 serpin domain containing protein, putative, expressed K13963: serpin B
5 Sobic.001G233300 - -
6 Sobic.003G174400 - -
7 Sobic.001G542150 - -
8 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
9 Sobic.003G174301 - -
10 Sobic.002G153200 - -
11 Sobic.009G006400 auxin-induced protein 5NG4, putative, expressed -
12 Sobic.001G006600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY80, expressed -
13 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
14 Sobic.002G143766 - -
15 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.006G038300 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
17 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.006G222000 MBTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
20 Sobic.010G043100 serine esterase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G139366 Sobic003G139366 Sobic001G176501 Sobic001G176501 Sobic003G139366--Sobic001G176501 Sobic010G135900 Sobic010G135900 Sobic003G139366--Sobic010G135900 Sobic010G187000 Sobic010G187000 Sobic003G139366--Sobic010G187000 Sobic002G048100 Sobic002G048100 Sobic003G139366--Sobic002G048100 Sobic001G233300 Sobic001G233300 Sobic003G139366--Sobic001G233300 Sobic003G174400 Sobic003G174400 Sobic003G139366--Sobic003G174400 Sobic001G542150 Sobic001G542150 Sobic003G139366--Sobic001G542150 Sobic002G249300 Sobic002G249300 Sobic003G139366--Sobic002G249300 Sobic003G174301 Sobic003G174301 Sobic003G139366--Sobic003G174301 Sobic001G176501--Sobic003G174400 Sobic001G176501--Sobic002G249300 Sobic001G176501--Sobic010G135900 Sobic001G496100 Sobic001G496100 Sobic001G176501--Sobic001G496100 Sobic001G176501--Sobic003G174301 Sobic004G034600 Sobic004G034600 Sobic001G176501--Sobic004G034600 Sobic009G006400 Sobic009G006400 Sobic001G176501--Sobic009G006400 Sobic001G000501 Sobic001G000501 Sobic001G176501--Sobic001G000501 Sobic005G149700 Sobic005G149700 Sobic001G176501--Sobic005G149700 Sobic010G135900--Sobic001G176501 Sobic010G135900--Sobic003G174400 Sobic004G321800 Sobic004G321800 Sobic010G135900--Sobic004G321800 Sobic002G190500 Sobic002G190500 Sobic010G135900--Sobic002G190500 Sobic007G092900 Sobic007G092900 Sobic010G135900--Sobic007G092900 Sobic004G320600 Sobic004G320600 Sobic010G135900--Sobic004G320600 Sobic003G138200 Sobic003G138200 Sobic010G135900--Sobic003G138200 Sobic007G187300 Sobic007G187300 Sobic010G135900--Sobic007G187300 Sobic007G093000 Sobic007G093000 Sobic010G135900--Sobic007G093000 Sobic004G030200 Sobic004G030200 Sobic010G187000--Sobic004G030200 Sobic005G057700 Sobic005G057700 Sobic010G187000--Sobic005G057700 Sobic010G187000--Sobic003G139366 Sobic002G266100 Sobic002G266100 Sobic010G187000--Sobic002G266100 Sobic004G154466 Sobic004G154466 Sobic010G187000--Sobic004G154466 Sobic007G044201 Sobic007G044201 Sobic010G187000--Sobic007G044201 Sobic007G095300 Sobic007G095300 Sobic010G187000--Sobic007G095300 Sobic004G154532 Sobic004G154532 Sobic010G187000--Sobic004G154532 Sobic003G227501 Sobic003G227501 Sobic010G187000--Sobic003G227501 Sobic001G268000 Sobic001G268000 Sobic002G048100--Sobic001G268000 Sobic006G035400 Sobic006G035400 Sobic002G048100--Sobic006G035400 Sobic002G048100--Sobic001G233300 Sobic001G363900 Sobic001G363900 Sobic002G048100--Sobic001G363900 Sobic006G226400 Sobic006G226400 Sobic002G048100--Sobic006G226400 Sobic002G420700 Sobic002G420700 Sobic002G048100--Sobic002G420700 Sobic010G145500 Sobic010G145500 Sobic002G048100--Sobic010G145500 Sobic002G048100--Sobic001G542150 Sobic002G048100--Sobic003G139366 Sobic002G153200 Sobic002G153200 Sobic001G233300--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G233300--Sobic002G143766 Sobic001G223550 Sobic001G223550 Sobic001G233300--Sobic001G223550 Sobic001G233300--Sobic002G249300 Sobic001G233300--Sobic001G542150 Sobic001G233300--Sobic010G145500 Sobic001G233300--Sobic004G034600 Sobic001G233300--Sobic005G149700 Sobic001G233300--Sobic001G000501 Sobic003G174400--Sobic001G176501 Sobic003G174400--Sobic002G249300 Sobic001G459600 Sobic001G459600 Sobic003G174400--Sobic001G459600 Sobic003G174400--Sobic004G034600 Sobic003G174400--Sobic005G149700 Sobic003G174400--Sobic010G135900 Sobic003G174400--Sobic001G000501 Sobic003G174400--Sobic003G174301 Sobic003G174400--Sobic001G496100 Sobic001G542150--Sobic001G233300 Sobic001G542150--Sobic002G153200 Sobic001G542150--Sobic002G143766 Sobic009G007200 Sobic009G007200 Sobic001G542150--Sobic009G007200 Sobic001G542150--Sobic001G176501 Sobic001G542150--Sobic003G174400 Sobic001G542150--Sobic002G249300 Sobic004G057500 Sobic004G057500 Sobic001G542150--Sobic004G057500 Sobic005G150400 Sobic005G150400 Sobic001G542150--Sobic005G150400 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic009G011600 Sobic009G011600 Sobic002G249300--Sobic009G011600 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic003G174301--Sobic002G249300 Sobic003G174301--Sobic004G034600 Sobic003G174301--Sobic005G149700 Sobic005G053200 Sobic005G053200 Sobic003G174301--Sobic005G053200 Sobic003G174301--Sobic009G011600 Sobic001G053200 Sobic001G053200 Sobic003G174301--Sobic001G053200 Sobic004G070500 Sobic004G070500 Sobic003G174301--Sobic004G070500 Sobic003G174301--Sobic001G252000 Sobic003G174301--Sobic001G176501
Octagon: transcription factors


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