Gene annotation
Transcriptome id Sobic.003G069950.2,Sobic.003G069950.1,Sobic.003G069950.3
Synonym -
Functional annotation -
UniProt A0A1W0VW26
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF50
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g05960.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a035650
Brachypodium KQK02282 , KQK02275
Barley HORVU5Hr1G085140.1 , HORVU5Hr1G087090.5 , HORVU5Hr1G087090.4 , HORVU5Hr1G087090.1 , HORVU5Hr1G087090.3 , HORVU5Hr1G087090.2 , HORVU5Hr1G041390.2 , HORVU5Hr1G041390.3 , HORVU5Hr1G085140.3 , HORVU5Hr1G085140.2 , HORVU5Hr1G085140.4 , HORVU5Hr1G067300.1
Wheat TraesCS1B02G004700 , TraesCS4B02G360600 , TraesCS3A02G043500 , TraesCS4B02G360600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G069875 - -
2 Sobic.001G248200 OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
3 Sobic.007G169300 expressed protein -
4 Sobic.001G517800 NIN, putative, expressed -
5 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
6 Sobic.009G011600 expressed protein -
7 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
8 Sobic.001G459600 expressed protein -
9 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
10 Sobic.010G043100 serine esterase family protein, putative, expressed -
11 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
12 Sobic.004G265800 uridine kinase, putative, expressed -
13 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
14 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.001G496100 - -
16 Sobic.003G322700 expressed protein -
17 Sobic.009G147300 expressed protein -
18 Sobic.003G434900 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
19 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
20 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G069950 Sobic003G069950 Sobic003G069875 Sobic003G069875 Sobic003G069950--Sobic003G069875 Sobic001G248200 Sobic001G248200 Sobic003G069950--Sobic001G248200 Sobic007G169300 Sobic007G169300 Sobic003G069950--Sobic007G169300 Sobic001G517800 Sobic001G517800 Sobic003G069950--Sobic001G517800 Sobic003G317500 Sobic003G317500 Sobic003G069950--Sobic003G317500 Sobic009G011600 Sobic009G011600 Sobic003G069950--Sobic009G011600 Sobic001G351800 Sobic001G351800 Sobic003G069950--Sobic001G351800 Sobic001G459600 Sobic001G459600 Sobic003G069950--Sobic001G459600 Sobic003G301900 Sobic003G301900 Sobic003G069950--Sobic003G301900 Sobic003G069875--Sobic003G069950 Sobic006G061900 Sobic006G061900 Sobic003G069875--Sobic006G061900 Sobic003G069875--Sobic001G459600 Sobic008G007400 Sobic008G007400 Sobic003G069875--Sobic008G007400 Sobic001G333300 Sobic001G333300 Sobic003G069875--Sobic001G333300 Sobic004G113000 Sobic004G113000 Sobic003G069875--Sobic004G113000 Sobic003G069875--Sobic001G248200 Sobic002G059932 Sobic002G059932 Sobic003G069875--Sobic002G059932 Sobic009G147300 Sobic009G147300 Sobic003G069875--Sobic009G147300 Sobic005G095660 Sobic005G095660 Sobic001G248200--Sobic005G095660 Sobic006G030600 Sobic006G030600 Sobic001G248200--Sobic006G030600 Sobic001G396000 Sobic001G396000 Sobic001G248200--Sobic001G396000 Sobic010G203200 Sobic010G203200 Sobic001G248200--Sobic010G203200 Sobic004G034600 Sobic004G034600 Sobic001G248200--Sobic004G034600 Sobic008G081800 Sobic008G081800 Sobic001G248200--Sobic008G081800 Sobic004G131040 Sobic004G131040 Sobic001G248200--Sobic004G131040 Sobic007G010700 Sobic007G010700 Sobic001G248200--Sobic007G010700 Sobic001G248300 Sobic001G248300 Sobic001G248200--Sobic001G248300 Sobic007G227700 Sobic007G227700 Sobic007G169300--Sobic007G227700 Sobic008G081900 Sobic008G081900 Sobic007G169300--Sobic008G081900 Sobic006G030400 Sobic006G030400 Sobic007G169300--Sobic006G030400 Sobic002G193100 Sobic002G193100 Sobic007G169300--Sobic002G193100 Sobic002G129400 Sobic002G129400 Sobic007G169300--Sobic002G129400 Sobic007G169300--Sobic009G011600 Sobic002G349100 Sobic002G349100 Sobic007G169300--Sobic002G349100 Sobic004G026500 Sobic004G026500 Sobic007G169300--Sobic004G026500 Sobic010G058200 Sobic010G058200 Sobic007G169300--Sobic010G058200 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic003G322700 Sobic003G322700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic003G317500--Sobic003G301900 Sobic003G317500--Sobic001G517800 Sobic003G317500--Sobic003G320700 Sobic003G434900 Sobic003G434900 Sobic003G317500--Sobic003G434900 Sobic006G087700 Sobic006G087700 Sobic003G317500--Sobic006G087700 Sobic003G317500--Sobic005G149200 Sobic010G139600 Sobic010G139600 Sobic003G317500--Sobic010G139600 Sobic003G317500--Sobic009G011600 Sobic006G233500 Sobic006G233500 Sobic003G317500--Sobic006G233500 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic001G496100 Sobic001G496100 Sobic009G011600--Sobic001G496100 Sobic005G149700 Sobic005G149700 Sobic009G011600--Sobic005G149700 Sobic009G011600--Sobic010G020800 Sobic009G011600--Sobic007G169300 Sobic002G249300 Sobic002G249300 Sobic009G011600--Sobic002G249300 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic001G351800--Sobic004G034600 Sobic001G351800--Sobic003G322700 Sobic002G266000 Sobic002G266000 Sobic001G351800--Sobic002G266000 Sobic003G010600 Sobic003G010600 Sobic001G351800--Sobic003G010600 Sobic004G124200 Sobic004G124200 Sobic001G351800--Sobic004G124200 Sobic009G034700 Sobic009G034700 Sobic001G351800--Sobic009G034700 Sobic010G192800 Sobic010G192800 Sobic001G351800--Sobic010G192800 Sobic004G225200 Sobic004G225200 Sobic001G351800--Sobic004G225200 Sobic001G282600 Sobic001G282600 Sobic001G351800--Sobic001G282600 Sobic001G459600--Sobic001G517800 Sobic001G000501 Sobic001G000501 Sobic001G459600--Sobic001G000501 Sobic001G459600--Sobic004G034600 Sobic001G000700 Sobic001G000700 Sobic001G459600--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic001G459600--Sobic002G418800 Sobic008G084300 Sobic008G084300 Sobic001G459600--Sobic008G084300 Sobic008G166550 Sobic008G166550 Sobic001G459600--Sobic008G166550 Sobic001G223550 Sobic001G223550 Sobic001G459600--Sobic001G223550 Sobic005G133600 Sobic005G133600 Sobic001G459600--Sobic005G133600 Sobic003G301900--Sobic002G146300 Sobic003G301900--Sobic001G517800 Sobic003G301900--Sobic010G139600 Sobic003G190400 Sobic003G190400 Sobic003G301900--Sobic003G190400 Sobic003G301900--Sobic005G149200 Sobic003G301900--Sobic003G320700 Sobic006G219600 Sobic006G219600 Sobic003G301900--Sobic006G219600 Sobic003G301900--Sobic006G087700 Sobic007G190000 Sobic007G190000 Sobic003G301900--Sobic007G190000
Octagon: transcription factors


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