Gene annotation
| Transcriptome id | Sobic.008G062800.1 |
|---|---|
| Synonym | Sb08g005230 |
| Functional annotation | expressed protein |
| UniProt | C6JSQ4 , C5YT82 |
| Pfam | - |
| Panther DB | PTHR34546 PTHR34546:SF2 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G78810 : - |
|---|---|
| RAP-DB (Rice) | LOC_Os01g55420.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a027496 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G276700 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 2 | Sobic.001G382266 | - | - |
| 3 | Sobic.001G382266 | - | - |
| 4 | Sobic.001G382266 | - | - |
| 5 | Sobic.001G382266 | - | - |
| 6 | Sobic.001G382266 | - | - |
| 7 | Sobic.001G382266 | - | - |
| 8 | Sobic.001G382266 | - | - |
| 9 | Sobic.008G059300 | AP2 domain containing protein, expressed | - |
| 10 | Sobic.002G263500 | - | - |
| 11 | Sobic.008G044500 | zinc finger superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@expressed protein | - |
| 12 | Sobic.002G144150 | - | - |
| 13 | Sobic.008G092932 | - | - |
| 14 | Sobic.010G110266 | - | - |
| 15 | Sobic.001G133532 | - | - |
| 16 | Sobic.002G200300 | no apical meristem protein, putative, expressed | - |
| 17 | Sobic.004G273900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@peroxidase precursor, putative, expressed | K00430: peroxidase |
| 18 | Sobic.010G141433 | - | - |
| 19 | Sobic.001G243500 | glycine-rich cell wall structural protein 2 precursor, putative, expressed | - |
| 20 | Sobic.004G189301 | - | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
