Gene annotation
Transcriptome id Sobic.008G059300.1
Synonym
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1B6PBQ5
Pfam -
Panther DB PTHR31190 PTHR31190:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47520 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g25260.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035951 , Zm00025a010335 , Zm00025a010338 , Zm00025a022855 , Zm00025a033320
Brachypodium KQK09018 , KQK19497 , KQJ98221 , KQJ94688
Barley HORVU4Hr1G079630.1 , HORVU5Hr1G079980.1 , HORVU3Hr1G030310.1 , HORVU4Hr1G000960.1 , HORVU0Hr1G013490.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G276700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.001G382266 - -
3 Sobic.001G382266 - -
4 Sobic.001G382266 - -
5 Sobic.001G382266 - -
6 Sobic.001G382266 - -
7 Sobic.001G382266 - -
8 Sobic.001G382266 - -
9 Sobic.002G144150 - -
10 Sobic.008G062800 expressed protein -
11 Sobic.008G092932 - -
12 Sobic.002G263500 - -
13 Sobic.008G044500 zinc finger superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
14 Sobic.004G189301 - -
15 Sobic.008G000201 - -
16 Sobic.007G114301 - -
17 Sobic.002G156900 expressed protein -
18 Sobic.002G069400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.002G080400 zinc knuckle domain containing protein, expressed -
20 Sobic.010G110266 - -


Gene co-expression network
sample Sobic008G059300 Sobic008G059300 Sobic001G276700 Sobic001G276700 Sobic008G059300--Sobic001G276700 Sobic001G382266 Sobic001G382266 Sobic008G059300--Sobic001G382266 Sobic002G144150 Sobic002G144150 Sobic008G059300--Sobic002G144150 Sobic001G276700--Sobic001G382266 Sobic001G276700--Sobic008G059300 Sobic001G276700--Sobic002G144150 Sobic001G382266--Sobic001G382266 Sobic001G382266--Sobic001G276700 Sobic001G382266--Sobic008G059300 Sobic001G382266--Sobic002G144150 Sobic002G144150--Sobic001G382266 Sobic002G144150--Sobic001G276700 Sobic002G144150--Sobic008G059300
Octagon: transcription factors


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