Gene annotation
| Transcriptome id | Sobic.008G000201.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1B6PAP3 |
| Pfam | PF12146 |
| Panther DB | PTHR11614 PTHR11614:SF103 |
| NCBI CDD | KOG1455; Lysophospholipase |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G55180 : alpha/beta-Hydrolases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g16180.1 : lipase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a041037 |
| Brachypodium | - |
| Barley | HORVU5Hr1G049360.3 , HORVU5Hr1G049360.2 , HORVU5Hr1G049360.1 , HORVU5Hr1G049360.4 |
| Wheat | TraesCS5B02G156100 , TraesCS5A02G157600 , TraesCS5A02G157600 , TraesCS5D02G163000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G044500 | zinc finger superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@expressed protein | - |
| 2 | Sobic.008G059300 | AP2 domain containing protein, expressed | - |
| 3 | Sobic.007G114301 | - | - |
| 4 | Sobic.002G069400 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 5 | Sobic.001G276700 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 6 | Sobic.001G382266 | - | - |
| 7 | Sobic.001G382266 | - | - |
| 8 | Sobic.001G382266 | - | - |
| 9 | Sobic.001G382266 | - | - |
| 10 | Sobic.001G382266 | - | - |
| 11 | Sobic.001G382266 | - | - |
| 12 | Sobic.001G382266 | - | - |
| 13 | Sobic.002G196100 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 14 | Sobic.004G189301 | - | - |
| 15 | Sobic.003G229100 | cytochrome P450 72A1, putative, expressed | - |
| 16 | Sobic.010G151200 | GRF zinc finger family protein, expressed | - |
| 17 | Sobic.006G277550 | - | K00430: peroxidase |
| 18 | Sobic.003G015300 | expressed protein | - |
| 19 | Sobic.002G196000 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 20 | Sobic.006G038800 | purple acid phosphatase 27("PubMedID : 26759170,PubMedID : 24597475")@nucleotide pyrophosphatase/phosphodiesterase, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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