Gene annotation
Transcriptome id Sobic.002G196000.1
Synonym MYB43, AtMYB43, Sb02g024250
Functional annotation MYB family transcription factor, putative, expressed
UniProt Q8S3Y7 , Q6URU0 , C5XC55
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF503
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16600 : myb domain protein 43
RAP-DB (Rice) LOC_Os09g23620.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053274 , Zm00025a032024 , Zm00025a031141 , Zm00025a005701 , Zm00025a030884 , Zm00025a005986 , Zm00025a032132 , Zm00025a047090 , Zm00025a034206 , Zm00025a046904 , Zm00025a046903 , Zm00025a032658 , Zm00025a053397 , Zm00025a047793 , Zm00025a025444 , Zm00025a021107 , Zm00025a024299 , Zm00025a042709 , Zm00025a032383 , Zm00025a017369 , Zm00025a013941 , Zm00025a048846 , Zm00025a034111 , Zm00025a036074
Brachypodium KQJ91191 , KQK15034 , KQK15035 , KQJ86312 , KQJ92025 , KQK18687 , KQJ89177 , KQK02877 , KQJ83607 , KQJ98346 , KQJ89311 , KQJ90159 , KQK19995 , KQJ90229 , PNT76695 , KQK01592 , KQK23714
Barley HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU5Hr1G103970.5 , HORVU5Hr1G103970.4 , HORVU5Hr1G103970.6 , HORVU5Hr1G103970.1 , HORVU5Hr1G103970.3 , HORVU5Hr1G103970.2 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU4Hr1G018360.9 , HORVU2Hr1G087990.2 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G041810.9 , HORVU7Hr1G041810.8 , HORVU7Hr1G041810.1 , HORVU7Hr1G041810.3 , HORVU7Hr1G041810.2 , HORVU7Hr1G041810.5 , HORVU7Hr1G041810.4 , HORVU7Hr1G041810.7 , HORVU7Hr1G041810.6 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU5Hr1G060650.10 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU2Hr1G087990.1 , HORVU3Hr1G016940.1 , HORVU5Hr1G036900.3 , HORVU5Hr1G036900.1 , HORVU5Hr1G036900.6 , HORVU5Hr1G036900.5 , HORVU5Hr1G036900.4 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.4 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.9
Wheat TraesCS6D02G274900 , TraesCS5B02G330100 , TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS3D02G094500 , TraesCS2D02G209600 , TraesCS2B02G399200 , TraesCS2B02G399200 , TraesCS4B02G096500 , TraesCS5B02G203100 , TraesCS2A02G363800 , TraesCS7A02G205100 , TraesCS2A02G206400 , TraesCS3B02G109800 , TraesCS2A02G447500 , TraesCS4B02G344000 , TraesCS7B02G112400 , TraesCS7B02G112400 , TraesCS2A02G381900 , TraesCS2A02G381900 , TraesCS7A02G030600 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS5D02G335700 , TraesCS5D02G225800 , TraesCS5A02G512700 , TraesCS2D02G378400 , TraesCS2D02G378400 , TraesCS5A02G111300 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS5A02G217900 , TraesCS5A02G205200 , TraesCS7A02G030800 , TraesCS7A02G030700 , TraesCS4A02G217800 , TraesCS5D02G326600 , TraesCS5D02G210900 , TraesCS4D02G092900 , TraesCS5B02G119300 , TraesCS2D02G361600 , TraesCS5B02G216900 , TraesCS7D02G208000 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS4A02G322200 , TraesCS7D02G130100 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.004G121800 expansin precursor, putative, expressed -
3 Sobic.010G214300 - -
4 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -
5 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.004G121600 expansin precursor, putative, expressed -
7 Sobic.003G007400 expressed protein -
8 Sobic.001G342000 expressed protein -
9 Sobic.007G186500 resistance protein, putative, expressed -
10 Sobic.009G204900 receptor-like protein kinase, putative, expressed -
11 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
12 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
13 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
14 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.002G166150 - -
16 Sobic.009G219300 expressed protein -
17 Sobic.001G506800 exostosin family domain containing protein, expressed -
18 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
20 Sobic.010G268700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic002G196000 Sobic002G196000 Sobic008G010500 Sobic008G010500 Sobic002G196000--Sobic008G010500 Sobic004G121800 Sobic004G121800 Sobic002G196000--Sobic004G121800 Sobic010G214300 Sobic010G214300 Sobic002G196000--Sobic010G214300 Sobic001G272800 Sobic001G272800 Sobic002G196000--Sobic001G272800 Sobic001G231800 Sobic001G231800 Sobic002G196000--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic002G196000--Sobic004G121600 Sobic003G007400 Sobic003G007400 Sobic002G196000--Sobic003G007400 Sobic001G342000 Sobic001G342000 Sobic002G196000--Sobic001G342000 Sobic007G186500 Sobic007G186500 Sobic002G196000--Sobic007G186500 Sobic001G301000 Sobic001G301000 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic008G010500--Sobic004G121600 Sobic010G268700 Sobic010G268700 Sobic008G010500--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic008G010500--Sobic005G119900 Sobic005G206000 Sobic005G206000 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic010G245400 Sobic010G245400 Sobic008G010500--Sobic010G245400 Sobic003G053200 Sobic003G053200 Sobic008G010500--Sobic003G053200 Sobic004G121800--Sobic004G121600 Sobic004G121800--Sobic003G441700 Sobic004G121800--Sobic003G053200 Sobic004G121800--Sobic001G272800 Sobic004G121800--Sobic008G010500 Sobic003G441800 Sobic003G441800 Sobic004G121800--Sobic003G441800 Sobic004G121800--Sobic001G301000 Sobic004G121800--Sobic001G231800 Sobic009G055300 Sobic009G055300 Sobic004G121800--Sobic009G055300 Sobic001G506800 Sobic001G506800 Sobic010G214300--Sobic001G506800 Sobic010G214300--Sobic003G007400 Sobic010G214300--Sobic001G342000 Sobic010G214300--Sobic008G010500 Sobic010G214300--Sobic007G186500 Sobic008G164450 Sobic008G164450 Sobic010G214300--Sobic008G164450 Sobic010G204200 Sobic010G204200 Sobic010G214300--Sobic010G204200 Sobic006G135300 Sobic006G135300 Sobic010G214300--Sobic006G135300 Sobic007G135100 Sobic007G135100 Sobic010G214300--Sobic007G135100 Sobic001G415100 Sobic001G415100 Sobic001G272800--Sobic001G415100 Sobic001G272800--Sobic009G055300 Sobic001G272800--Sobic004G121600 Sobic002G289500 Sobic002G289500 Sobic001G272800--Sobic002G289500 Sobic009G136800 Sobic009G136800 Sobic001G272800--Sobic009G136800 Sobic006G230100 Sobic006G230100 Sobic001G272800--Sobic006G230100 Sobic002G063700 Sobic002G063700 Sobic001G272800--Sobic002G063700 Sobic001G153100 Sobic001G153100 Sobic001G272800--Sobic001G153100 Sobic009G165100 Sobic009G165100 Sobic001G272800--Sobic009G165100 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic004G121600--Sobic003G441700 Sobic004G121600--Sobic001G301000 Sobic006G097900 Sobic006G097900 Sobic004G121600--Sobic006G097900 Sobic004G121600--Sobic005G119900 Sobic004G121600--Sobic003G053200 Sobic004G121600--Sobic003G441800 Sobic004G121600--Sobic008G010500 Sobic001G218400 Sobic001G218400 Sobic004G121600--Sobic001G218400 Sobic004G121600--Sobic004G121800 Sobic003G007400--Sobic001G506800 Sobic003G007400--Sobic004G121600 Sobic009G095800 Sobic009G095800 Sobic003G007400--Sobic009G095800 Sobic003G007400--Sobic007G186500 Sobic003G007400--Sobic001G342000 Sobic003G007400--Sobic008G010500 Sobic003G007400--Sobic008G164450 Sobic003G007400--Sobic010G214300 Sobic005G216600 Sobic005G216600 Sobic003G007400--Sobic005G216600 Sobic004G014600 Sobic004G014600 Sobic001G342000--Sobic004G014600 Sobic010G213600 Sobic010G213600 Sobic001G342000--Sobic010G213600 Sobic008G033100 Sobic008G033100 Sobic001G342000--Sobic008G033100 Sobic002G166150 Sobic002G166150 Sobic001G342000--Sobic002G166150 Sobic002G029500 Sobic002G029500 Sobic001G342000--Sobic002G029500 Sobic001G342000--Sobic009G165100 Sobic003G079100 Sobic003G079100 Sobic001G342000--Sobic003G079100 Sobic001G342000--Sobic001G272800 Sobic003G255600 Sobic003G255600 Sobic001G342000--Sobic003G255600 Sobic007G186500--Sobic004G121600 Sobic007G186500--Sobic010G268700 Sobic007G186500--Sobic006G097900 Sobic007G186500--Sobic005G216600 Sobic003G161400 Sobic003G161400 Sobic007G186500--Sobic003G161400 Sobic007G186500--Sobic001G301000 Sobic007G186500--Sobic008G010500 Sobic007G186500--Sobic003G007400 Sobic005G182900 Sobic005G182900 Sobic007G186500--Sobic005G182900
Octagon: transcription factors


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