Gene annotation
Transcriptome id Sobic.004G273900.1
Synonym RCI3A, Sb04g031120, RCI3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
peroxidase precursor, putative, expressed
UniProt A0A1Z5RPH4
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF68
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G05260 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os05g04490.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021632 , Zm00025a024242 , Zm00025a055318 , Zm00025a055316 , Zm00025a055314 , Zm00025a048923 , Zm00025a015274 , Zm00025a015275
Brachypodium KQK21558 , KQK04189 , KQK04190 , KQK07688 , KQK04037 , KQK05559
Barley HORVU3Hr1G074920.1 , HORVU3Hr1G074920.2 , HORVU0Hr1G002770.2 , HORVU0Hr1G002770.1 , HORVU1Hr1G066550.1 , HORVU2Hr1G026370.2 , HORVU2Hr1G026370.1 , HORVU1Hr1G016770.10 , HORVU1Hr1G016770.11 , HORVU1Hr1G066600.1 , HORVU6Hr1G014050.2 , HORVU6Hr1G014050.3 , HORVU1Hr1G022630.1 , HORVU1Hr1G016840.4 , HORVU1Hr1G016840.5 , HORVU2Hr1G026450.3 , HORVU1Hr1G016840.1 , HORVU1Hr1G016840.2 , HORVU1Hr1G016840.3 , HORVU1Hr1G016820.2 , HORVU1Hr1G016820.1 , HORVU2Hr1G111610.7 , HORVU1Hr1G066540.1 , HORVU1Hr1G016770.8 , HORVU1Hr1G016770.1 , HORVU2Hr1G111610.2 , HORVU2Hr1G111610.3 , HORVU2Hr1G111610.6
Wheat TraesCS1B02G330400 , TraesCS1B02G330400 , TraesCS1B02G331200 , TraesCS1D02G318500 , TraesCS1B02G096200 , TraesCS1A02G318700 , TraesCS2B02G173500 , TraesCS1D02G318200 , TraesCS1D02G318400 , TraesCS1D02G080300 , TraesCS1D02G318600 , TraesCS2D02G152400 , TraesCS2B02G173300 , TraesCS1A02G318500 , TraesCS1A02G318500 , TraesCS1B02G330500 , TraesCS2B02G173000 , TraesCS1D02G203700 , TraesCS6A02G081700 , TraesCS1D02G318300 , TraesCS1D02G317800 , TraesCS1B02G214900 , TraesCS1D02G317700 , TraesCS1A02G318200 , TraesCS2D02G153400 , TraesCS2A02G147900 , TraesCS2A02G502100 , TraesCS2D02G153400 , TraesCS2D02G153300 , TraesCS1D02G317900 , TraesCS1A02G318400 , TraesCS2A02G148200 , TraesCS1A02G078100 , TraesCS2A02G148300 , TraesCS4B02G340100 , TraesCSU02G134300 , TraesCS1B02G330600 , TraesCS4B02G340200 , TraesCS2D02G152700 , TraesCS2A02G147800 , TraesCS1B02G096300 , TraesCS1D02G318100 , TraesCS2B02G530200 , TraesCS2D02G153200 , TraesCS2D02G153200 , TraesCS1D02G080400 , TraesCS3A02G378900 , TraesCS1A02G317900 , TraesCS1A02G318600 , TraesCS1B02G330200 , TraesCS1A02G318300 , TraesCS1B02G330700 , TraesCS1D02G318000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
3 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
4 Sobic.009G196400 expressed protein -
5 Sobic.004G111800 VQ domain containing protein, putative, expressed -
6 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.005G101600 dirigent, putative, expressed -
8 Sobic.005G206601 - -
9 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
10 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
11 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
12 Sobic.007G058300 AP2 domain containing protein, expressed -
13 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.010G023000 expressed protein -
16 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
17 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
18 Sobic.005G101700 dirigent, putative, expressed -
19 Sobic.007G151300 Cupin domain containing protein, expressed -
20 Sobic.010G110266 - -


Gene co-expression network
sample Sobic004G273900 Sobic004G273900 Sobic001G444400 Sobic001G444400 Sobic004G273900--Sobic001G444400 Sobic006G153100 Sobic006G153100 Sobic004G273900--Sobic006G153100 Sobic005G179200 Sobic005G179200 Sobic004G273900--Sobic005G179200 Sobic009G196400 Sobic009G196400 Sobic004G273900--Sobic009G196400 Sobic004G111800 Sobic004G111800 Sobic004G273900--Sobic004G111800 Sobic009G106800 Sobic009G106800 Sobic004G273900--Sobic009G106800 Sobic005G101600 Sobic005G101600 Sobic004G273900--Sobic005G101600 Sobic005G206601 Sobic005G206601 Sobic004G273900--Sobic005G206601 Sobic003G437100 Sobic003G437100 Sobic004G273900--Sobic003G437100 Sobic001G444400--Sobic006G153100 Sobic010G084400 Sobic010G084400 Sobic001G444400--Sobic010G084400 Sobic001G444400--Sobic009G106800 Sobic001G444400--Sobic009G196400 Sobic007G141500 Sobic007G141500 Sobic001G444400--Sobic007G141500 Sobic003G252800 Sobic003G252800 Sobic001G444400--Sobic003G252800 Sobic001G444400--Sobic004G111800 Sobic001G100700 Sobic001G100700 Sobic001G444400--Sobic001G100700 Sobic003G426300 Sobic003G426300 Sobic001G444400--Sobic003G426300 Sobic006G153100--Sobic001G444400 Sobic006G153100--Sobic007G141500 Sobic003G117600 Sobic003G117600 Sobic006G153100--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic006G153100--Sobic002G416600 Sobic006G153100--Sobic010G084400 Sobic006G153100--Sobic005G179200 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic006G153100--Sobic009G196400 Sobic005G179200--Sobic006G153100 Sobic005G179200--Sobic003G117600 Sobic005G179200--Sobic005G206601 Sobic010G084700 Sobic010G084700 Sobic005G179200--Sobic010G084700 Sobic005G179200--Sobic001G444400 Sobic005G063100 Sobic005G063100 Sobic005G179200--Sobic005G063100 Sobic004G071650 Sobic004G071650 Sobic005G179200--Sobic004G071650 Sobic005G051200 Sobic005G051200 Sobic005G179200--Sobic005G051200 Sobic005G101700 Sobic005G101700 Sobic005G179200--Sobic005G101700 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G196400--Sobic009G106800 Sobic004G240600 Sobic004G240600 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic009G196400--Sobic007G141500 Sobic004G111800--Sobic001G444400 Sobic004G111800--Sobic010G084400 Sobic004G111800--Sobic006G153100 Sobic004G111800--Sobic009G106800 Sobic004G111800--Sobic003G252800 Sobic005G101800 Sobic005G101800 Sobic004G111800--Sobic005G101800 Sobic004G111800--Sobic005G206601 Sobic001G348700 Sobic001G348700 Sobic004G111800--Sobic001G348700 Sobic001G339700 Sobic001G339700 Sobic004G111800--Sobic001G339700 Sobic009G106800--Sobic001G444400 Sobic009G106800--Sobic010G084400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic009G106800--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic009G106800--Sobic005G213200 Sobic001G243600 Sobic001G243600 Sobic009G106800--Sobic001G243600 Sobic009G106800--Sobic003G252800 Sobic009G106800--Sobic006G153100 Sobic005G101600--Sobic005G101700 Sobic001G318600 Sobic001G318600 Sobic005G101600--Sobic001G318600 Sobic001G400800 Sobic001G400800 Sobic005G101600--Sobic001G400800 Sobic007G227300 Sobic007G227300 Sobic005G101600--Sobic007G227300 Sobic005G101600--Sobic005G206601 Sobic005G101600--Sobic005G101800 Sobic005G101600--Sobic010G084400 Sobic005G101600--Sobic003G437100 Sobic003G200700 Sobic003G200700 Sobic005G101600--Sobic003G200700 Sobic005G206601--Sobic007G227300 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic005G206601--Sobic001G348700 Sobic009G240600 Sobic009G240600 Sobic005G206601--Sobic009G240600 Sobic005G206601--Sobic010G084700 Sobic005G206601--Sobic001G400800 Sobic003G280100 Sobic003G280100 Sobic003G437100--Sobic003G280100 Sobic003G437100--Sobic005G206601 Sobic003G437100--Sobic007G227300 Sobic003G437100--Sobic005G101800 Sobic003G437100--Sobic003G426300 Sobic007G067600 Sobic007G067600 Sobic003G437100--Sobic007G067600 Sobic003G437100--Sobic005G101700 Sobic003G437100--Sobic010G084400 Sobic002G247600 Sobic002G247600 Sobic003G437100--Sobic002G247600
Octagon: transcription factors


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