Gene annotation
Transcriptome id Sobic.006G115200.1
Synonym MS188, ATMYB80, MYB103, Sb06g019650, AtMYB103
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5YAB3 , Q8S3Z2
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF653
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56110 : myb domain protein 103
RAP-DB (Rice) LOC_Os04g39470.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a020817 , Zm00025a056272 , Zm00025a048891 , Zm00025a038844 , Zm00025a005907 , Zm00025a005986 , Zm00025a047090 , Zm00025a032982 , Zm00025a013941 , Zm00025a013472 , Zm00025a023045
Brachypodium KQK03128 , KQK00034 , KQJ83102 , KQJ98746 , KQJ81930 , KQK02877 , KQJ87229 , KQJ98346 , KQJ84327 , PNT70109 , KQJ89311 , KQK19995 , PNT76695
Barley HORVU6Hr1G067380.1 , HORVU6Hr1G067380.2 , HORVU6Hr1G067380.3 , HORVU2Hr1G028470.3 , HORVU2Hr1G028470.2 , HORVU2Hr1G028470.1 , HORVU2Hr1G028470.7 , HORVU2Hr1G028470.6 , HORVU2Hr1G028470.5 , HORVU2Hr1G028470.4 , HORVU4Hr1G055680.1 , HORVU3Hr1G019590.1 , HORVU3Hr1G019590.3 , HORVU3Hr1G019590.2 , HORVU2Hr1G081720.2 , HORVU2Hr1G081720.3 , HORVU2Hr1G081720.1 , HORVU2Hr1G010450.5 , HORVU2Hr1G010450.2 , HORVU2Hr1G010450.1 , HORVU2Hr1G081730.1 , HORVU3Hr1G068550.1 , HORVU4Hr1G087730.1
Wheat TraesCS2B02G343800 , TraesCS4B02G366600 , TraesCS5A02G534400 , TraesCS2D02G444200 , TraesCS4D02G192400 , TraesCS6B02G292500 , TraesCS6D02G249200 , TraesCS2D02G163700 , TraesCS6A02G265300 , TraesCS2B02G082400 , TraesCS3D02G109800 , TraesCS2A02G331200 , TraesCS2A02G069300 , TraesCS3D02G286300 , TraesCS2D02G331700 , TraesCS4D02G360600 , TraesCS2A02G157600 , TraesCS3A02G286600 , TraesCS4B02G191200 , TraesCS2B02G351000 , TraesCS2B02G466500 , TraesCS3A02G108000 , TraesCS2B02G183100 , TraesCS4A02G113000 , TraesCS2D02G324800 , TraesCS2A02G338200 , TraesCS2D02G068000 , TraesCS3B02G126800 , TraesCS5D02G242200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G133100 ribosome inactivating protein, putative, expressed -
2 Sobic.002G173300 BURP domain containing protein, expressed -
3 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
8 Sobic.002G410600 - -
9 Sobic.006G006800 expressed protein -
10 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
11 Sobic.007G048500 CXXC1 - Cysteine-rich protein with CXXC and CXXXC motifs precursor, putative, expressed -
12 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
13 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
14 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
16 Sobic.004G349150 - -
17 Sobic.006G006900 expressed protein -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G115200 Sobic006G115200 Sobic001G133100 Sobic001G133100 Sobic006G115200--Sobic001G133100 Sobic002G173300 Sobic002G173300 Sobic006G115200--Sobic002G173300 Sobic007G180700 Sobic007G180700 Sobic006G115200--Sobic007G180700 Sobic003G004900 Sobic003G004900 Sobic006G115200--Sobic003G004900 Sobic004G001700 Sobic004G001700 Sobic006G115200--Sobic004G001700 Sobic003G038800 Sobic003G038800 Sobic006G115200--Sobic003G038800 Sobic003G038700 Sobic003G038700 Sobic006G115200--Sobic003G038700 Sobic002G410600 Sobic002G410600 Sobic006G115200--Sobic002G410600 Sobic006G006800 Sobic006G006800 Sobic006G115200--Sobic006G006800 Sobic001G133100--Sobic002G173300 Sobic001G133100--Sobic004G001700 Sobic001G133100--Sobic006G006800 Sobic001G133100--Sobic007G180700 Sobic001G133100--Sobic003G004900 Sobic010G189366 Sobic010G189366 Sobic001G133100--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic001G133100--Sobic004G349150 Sobic006G267400 Sobic006G267400 Sobic001G133100--Sobic006G267400 Sobic002G270400 Sobic002G270400 Sobic001G133100--Sobic002G270400 Sobic002G173300--Sobic004G001700 Sobic002G173300--Sobic007G180700 Sobic002G173300--Sobic006G267400 Sobic002G173300--Sobic006G006800 Sobic006G098300 Sobic006G098300 Sobic002G173300--Sobic006G098300 Sobic002G173300--Sobic002G270400 Sobic002G173300--Sobic004G349150 Sobic009G074900 Sobic009G074900 Sobic002G173300--Sobic009G074900 Sobic003G088200 Sobic003G088200 Sobic002G173300--Sobic003G088200 Sobic007G180700--Sobic006G267400 Sobic007G180700--Sobic006G098300 Sobic007G180700--Sobic003G004900 Sobic007G180700--Sobic002G270400 Sobic002G399600 Sobic002G399600 Sobic007G180700--Sobic002G399600 Sobic007G180700--Sobic004G001700 Sobic007G180700--Sobic002G173300 Sobic010G187400 Sobic010G187400 Sobic007G180700--Sobic010G187400 Sobic007G107500 Sobic007G107500 Sobic007G180700--Sobic007G107500 Sobic003G004900--Sobic007G180700 Sobic003G004900--Sobic006G267400 Sobic001G102600 Sobic001G102600 Sobic003G004900--Sobic001G102600 Sobic003G004900--Sobic010G189366 Sobic003G004900--Sobic002G173300 Sobic003G004900--Sobic004G349150 Sobic003G004900--Sobic004G001700 Sobic003G004900--Sobic006G098300 Sobic006G137000 Sobic006G137000 Sobic003G004900--Sobic006G137000 Sobic004G001700--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic004G001700--Sobic006G006900 Sobic004G001700--Sobic002G270400 Sobic008G032400 Sobic008G032400 Sobic004G001700--Sobic008G032400 Sobic007G098600 Sobic007G098600 Sobic004G001700--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic004G001700--Sobic002G427550 Sobic001G133200 Sobic001G133200 Sobic004G001700--Sobic001G133200 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic002G380800 Sobic002G380800 Sobic003G038800--Sobic002G380800 Sobic007G206000 Sobic007G206000 Sobic003G038800--Sobic007G206000 Sobic009G046000 Sobic009G046000 Sobic003G038800--Sobic009G046000 Sobic005G200700 Sobic005G200700 Sobic003G038800--Sobic005G200700 Sobic003G038800--Sobic001G133200 Sobic003G038700--Sobic002G410600 Sobic003G038700--Sobic001G133200 Sobic002G410600--Sobic003G038700 Sobic003G263800 Sobic003G263800 Sobic002G410600--Sobic003G263800 Sobic002G410600--Sobic007G098600 Sobic002G410600--Sobic002G427550 Sobic002G410600--Sobic001G133200 Sobic006G006800--Sobic004G001700 Sobic004G202800 Sobic004G202800 Sobic006G006800--Sobic004G202800 Sobic006G006800--Sobic002G270400 Sobic006G006800--Sobic006G006900 Sobic006G006800--Sobic007G098600 Sobic006G006800--Sobic001G133200
Octagon: transcription factors


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